GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000860-TA|BGIBMGA000860-PA|undefined
         (79 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    24   0.73 
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        22   3.0  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    21   5.2  

>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
          transcriptase protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 9  ITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMDAT 68
          + E++   S++N  + +IST+Q G      VT      + F+   HA    ASG  MD  
Sbjct: 14 VFEVVVQNSLLNCCRSLISTRQHGFFPRRSVT---TNLVEFVSHCHAA--FASGAQMDVI 68

Query: 69 AWD 71
            D
Sbjct: 69 YTD 71


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 53  GHACLFIASGPVM 65
           GH CLF+A  P +
Sbjct: 164 GHTCLFLAMHPAV 176


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
          protein AgamOBP41 protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 40 TGIKALSMIFILGGHACLFIASGPVM 65
          TG++ L +I +LGG      A G ++
Sbjct: 8  TGLQLLLLILVLGGSELQVKAKGSLI 33


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,660
Number of Sequences: 2123
Number of extensions: 2086
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 79
length of database: 516,269
effective HSP length: 52
effective length of query: 27
effective length of database: 405,873
effective search space: 10958571
effective search space used: 10958571
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)