Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000860-TA|BGIBMGA000860-PA|undefined
(79 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 42 7e-05
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 41 9e-05
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 41 9e-05
Z93381-5|CAB07608.1| 716|Caenorhabditis elegans Hypothetical pr... 41 1e-04
Z81533-8|CAB04331.1| 723|Caenorhabditis elegans Hypothetical pr... 39 4e-04
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 36 0.003
Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical pr... 36 0.003
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 36 0.003
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 36 0.004
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 34 0.010
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 33 0.018
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.024
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 33 0.024
Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical pr... 29 0.30
AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane... 29 0.30
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 27 1.6
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 27 1.6
U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical p... 27 2.1
AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical ... 27 2.1
Z77658-10|CAE17786.2| 201|Caenorhabditis elegans Hypothetical p... 26 3.6
AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical ... 25 4.8
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 25 8.4
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 41.5 bits (93), Expect = 7e-05
Identities = 17/59 (28%), Positives = 39/59 (66%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIAS 61
K++DS I +++ +FS+ N + ++S K+Q ++C+ I+ LSM++++ GH ++ +
Sbjct: 227 KREDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFLSMLWVVTGHTFSYLTT 285
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 41.1 bits (92), Expect = 9e-05
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
K+ DS I +++ +FS+ N + ++S K+Q ++C+ I+ LSM++I+ GH ++
Sbjct: 227 KRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFLSMLWIVTGHTFSYL 283
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 41.1 bits (92), Expect = 9e-05
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
K+ DS I +++ +FS+ N + ++S K+Q ++C+ I+ LSM++I+ GH ++
Sbjct: 227 KRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFLSMLWIVTGHTFSYL 283
>Z93381-5|CAB07608.1| 716|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 716
Score = 40.7 bits (91), Expect = 1e-04
Identities = 16/57 (28%), Positives = 37/57 (64%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
K+ DS I +++ +FS+ N + ++S K+Q ++C+ I+ +SM++++ GH ++
Sbjct: 219 KRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFVSMLWVVAGHTFTYL 275
>Z81533-8|CAB04331.1| 723|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 723
Score = 39.1 bits (87), Expect = 4e-04
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGH 54
K K ++ +++ SFS+ N + I+S K+Q ++C+ I+ LSM++++ GH
Sbjct: 237 KNKRHLLLKILISFSLWTNAELILSVKEQKVGFIKCLDCIRFLSMLWVVSGH 288
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 36.3 bits (80), Expect = 0.003
Identities = 15/53 (28%), Positives = 34/53 (64%)
Query: 7 SVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
++I +++ +FS+ N ++S K+Q ++C+ I+ LSM++++ GH F+
Sbjct: 238 NLIMKMLLTFSLWTNAGVLLSVKEQKPGFIKCLDCIRFLSMLWVVTGHTFTFV 290
>Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical
protein T14D7.2 protein.
Length = 734
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 2 GKKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
G+ S ++ +FS N+KK+I+ + + C+ G++ SM++ L GH+ +F+
Sbjct: 261 GEDAKSWSARILLAFSAKTNLKKLIALPKDPQSCITCLLGLRFGSMVWTLIGHSFIFV 318
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 KKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIA 60
+K + + L+ SFS N I++ Q ++C+ I+ LSM ++L GH + A
Sbjct: 237 EKSASLYRLLYSFSFWTNASTILNVSSQPATHIKCLDCIRGLSMAWVLSGHMLNYFA 293
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 35.5 bits (78), Expect = 0.004
Identities = 14/57 (24%), Positives = 38/57 (66%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
+K+++ +++ +FS+ N + ++S K+Q + ++ + I+ LSM +++ GH+ L++
Sbjct: 212 QKENNTFFKILLTFSLWTNAELLLSVKEQKSGFIKSLDCIRLLSMCWVVTGHSFLYL 268
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.010
Identities = 14/62 (22%), Positives = 36/62 (58%)
Query: 4 KKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGP 63
K+ ++ ++I +FS+ N + I+S K+ ++ + I+ LS+ +++ GH+ +++
Sbjct: 206 KEKNIFIKIILTFSLWTNAELILSVKEHKPGFIKSLDCIRGLSIFWVITGHSFIYMTQAD 265
Query: 64 VM 65
M
Sbjct: 266 TM 267
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 33.5 bits (73), Expect = 0.018
Identities = 14/56 (25%), Positives = 35/56 (62%)
Query: 4 KKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFI 59
K+ +V +++ SFS+ N + ++S K+Q ++ + I+ SM +++ GH+ +++
Sbjct: 226 KERNVFLKILLSFSLWTNAELLLSVKEQKPGFIKSLDCIRLFSMCWVVTGHSFIYL 281
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.024
Identities = 15/55 (27%), Positives = 33/55 (60%)
Query: 4 KKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLF 58
K+ ++ + + +FS N +I+S K+Q ++ + I+A S+ +++ GH+ LF
Sbjct: 156 KETNLYLKFLLAFSFWTNAGQILSVKEQKPGFIKSLDCIRAFSISWVIAGHSLLF 210
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.024
Identities = 15/55 (27%), Positives = 33/55 (60%)
Query: 4 KKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLF 58
K+ ++ + + +FS N +I+S K+Q ++ + I+A S+ +++ GH+ LF
Sbjct: 156 KETNLYLKFLLAFSFWTNAGQILSVKEQKPGFIKSLDCIRAFSISWVIAGHSLLF 210
>Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical
protein C08B11.4 protein.
Length = 822
Score = 29.5 bits (63), Expect = 0.30
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 11 ELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMD 66
+ I +FS+ N +I+ +K+ + + G++ LSM +I+ GH +I + D
Sbjct: 351 KFILAFSMYTNGSEILQSKKNDR-EINSLHGVRFLSMCWIILGHTYYYIGTSLTTD 405
>AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane
protein NRF-6 protein.
Length = 822
Score = 29.5 bits (63), Expect = 0.30
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 11 ELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMD 66
+ I +FS+ N +I+ +K+ + + G++ LSM +I+ GH +I + D
Sbjct: 351 KFILAFSMYTNGSEILQSKKNDR-EINSLHGVRFLSMCWIILGHTYYYIGTSLTTD 405
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 16 FSVINNVKKIISTKQQGNLGLECVTGIKALSMIFI 50
FS + N+K +I + LG EC G+ L + I
Sbjct: 114 FSKLKNLKTLIISSNDVQLGPECFAGLSQLQTLSI 148
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 16 FSVINNVKKIISTKQQGNLGLECVTGIKALSMIFI 50
FS + N+K +I + LG EC G+ L + I
Sbjct: 114 FSKLKNLKTLIISSNDVQLGPECFAGLSQLQTLSI 148
>U49830-10|AAL16312.1| 463|Caenorhabditis elegans Hypothetical
protein C33F10.8 protein.
Length = 463
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 18 VINNVKKIISTKQQGNLGLECVTGI-KALSMIFI 50
V+N VKKI K Q + ++C TG+ ++ ++F+
Sbjct: 329 VLNLVKKIGKKKSQAPVVVQCETGVNQSAELVFV 362
>AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical
protein Y39H10A.2 protein.
Length = 740
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLG-LECVTGIKALSMIFILGGH 54
+K++ +L ++FS N+K+I +TK G + + I+ +S +++ GH
Sbjct: 265 RKEEGFGWKLFSAFSFHRNLKEIFNTKNCHKEGQVTSLNCIRVISTFWVIFGH 317
>Z77658-10|CAE17786.2| 201|Caenorhabditis elegans Hypothetical
protein F14D7.9 protein.
Length = 201
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 9 ITELITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIAS 61
I TS + N I+ Q +L ++ + +LS+IF L + CLF +
Sbjct: 89 ILHFATSMHITNGDFDAINIWTQTSLYVDYCSNFLSLSVIFFLSLNRCLFFVA 141
>AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical
protein R13D7.2 protein.
Length = 353
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1 MGKKKDSVITELITSFSVINNVKKIISTKQQ 31
M ++KD V+ ++ FS++ + KK KQQ
Sbjct: 209 MKREKDQVLEQMNGLFSILRSSKKTEEEKQQ 239
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 12 LITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGG 53
+++ FS+ +N K+ ST+++ + L V G++ L I+ G
Sbjct: 246 ILSCFSIPDNAKRTFSTRRE-SPNLHVVHGLEFLLFFTIVSG 286
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 12 LITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGG 53
+++ FS+ +N K+ ST+++ + L V G++ L I+ G
Sbjct: 246 ILSCFSIPDNAKRTFSTRRE-SPNLHVVHGLEFLLFFTIVSG 286
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 12 LITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGG 53
+++ FS+ +N K+ ST+++ + L V G++ L I+ G
Sbjct: 246 ILSCFSIPDNAKRTFSTRRE-SPNLHVVHGLEFLLFFTIVSG 286
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,697,099
Number of Sequences: 27539
Number of extensions: 50106
Number of successful extensions: 122
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 24
length of query: 79
length of database: 12,573,161
effective HSP length: 59
effective length of query: 20
effective length of database: 10,948,360
effective search space: 218967200
effective search space used: 218967200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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