GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000859-TA|BGIBMGA000859-PA|IPR002160|Proteinase
inhibitor I3, Kunitz legume
         (75 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   3.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        19   7.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   7.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
          orthologue protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 3.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)

Query: 23 SPQGLLFGSS 32
          SPQG  FGSS
Sbjct: 43 SPQGASFGSS 52


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 42  VGIEDSNDNGVS 53
           +  +D+NDN VS
Sbjct: 372 INYKDTNDNNVS 383


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 38  FDECVGIEDSNDNGVSVD 55
           FD+   I D ND+   V+
Sbjct: 617 FDDAFEISDHNDDETQVN 634


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 38  FDECVGIEDSNDNGVSVD 55
           FD+   I D ND+   V+
Sbjct: 617 FDDAFEISDHNDDETQVN 634


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 38  FDECVGIEDSNDNGVSVD 55
           FD+   I D ND+   V+
Sbjct: 617 FDDAFEISDHNDDETQVN 634


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 38  FDECVGIEDSNDNGVSVD 55
           FD+   I D ND+   V+
Sbjct: 617 FDDAFEISDHNDDETQVN 634


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,528
Number of Sequences: 317
Number of extensions: 762
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 75
length of database: 114,650
effective HSP length: 45
effective length of query: 30
effective length of database: 100,385
effective search space:  3011550
effective search space used:  3011550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)