GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000859-TA|BGIBMGA000859-PA|IPR002160|Proteinase
inhibitor I3, Kunitz legume
         (75 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51495| Best HMM Match : Acyl_transf_3 (HMM E-Value=0.45)            31   0.13 
SB_22738| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   3.8  
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.7  
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.7  

>SB_51495| Best HMM Match : Acyl_transf_3 (HMM E-Value=0.45)
          Length = 936

 Score = 31.1 bits (67), Expect = 0.13
 Identities = 11/31 (35%), Positives = 21/31 (67%)

Query: 18  DASAKSPQGLLFGSSYHLGNFDECVGIEDSN 48
           DA+ K   G++ G+   +G++DEC+ I D++
Sbjct: 151 DAAGKPASGIMAGALAWIGSYDECLSIPDAH 181


>SB_22738| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 25  QGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYCL 60
           + ++ GSSY+L   D+C  +  +N     V  Q CL
Sbjct: 152 KSMIIGSSYNLAKIDQC-SVFINNTEVTRVKSQKCL 186


>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5834

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)

Query: 40  ECVGIEDSNDNGVSVDGQY 58
           +C+G  D NDNGV  DG +
Sbjct: 244 DCLGTPDCNDNGV-CDGSF 261


>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1829

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 37  NFDECVGIEDSNDNGVSVDGQYCLATIKWQHEENKDF 73
           +FD  +G++  +  G  + GQ C+ T+   +E N +F
Sbjct: 505 SFDSELGVDHKSSEGRQIWGQSCIKTL-MANEPNYNF 540


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.317    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,596
Number of Sequences: 59808
Number of extensions: 96880
Number of successful extensions: 125
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 124
Number of HSP's gapped (non-prelim): 4
length of query: 75
length of database: 16,821,457
effective HSP length: 53
effective length of query: 22
effective length of database: 13,651,633
effective search space: 300335926
effective search space used: 300335926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)