Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000859-TA|BGIBMGA000859-PA|IPR002160|Proteinase
inhibitor I3, Kunitz legume
(75 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical pr... 46 3e-06
AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane... 46 3e-06
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 32 0.056
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 32 0.056
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 32 0.056
AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical ... 29 0.39
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 25 6.4
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 25 8.5
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical p... 25 8.5
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical p... 25 8.5
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 25 8.5
>Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical
protein C08B11.4 protein.
Length = 822
Score = 46.0 bits (104), Expect = 3e-06
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 13 IFPVFDASAKSPQGLLFGSSYHLGNFDECVGIE-DSNDNGVSVDGQYCLATIKWQHEEN 70
IF VFDA K P G++ G++ +G++ C I+ N G GQYCLATI +N
Sbjct: 154 IFNVFDAMGKVPAGIMSGNNLWVGSWSTCRKIDVVKNAQGQKWKGQYCLATIDAYERDN 212
>AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane
protein NRF-6 protein.
Length = 822
Score = 46.0 bits (104), Expect = 3e-06
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 13 IFPVFDASAKSPQGLLFGSSYHLGNFDECVGIE-DSNDNGVSVDGQYCLATIKWQHEEN 70
IF VFDA K P G++ G++ +G++ C I+ N G GQYCLATI +N
Sbjct: 154 IFNVFDAMGKVPAGIMSGNNLWVGSWSTCRKIDVVKNAQGQKWKGQYCLATIDAYERDN 212
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 31.9 bits (69), Expect = 0.056
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 17 FDASAKSPQGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYC 59
FD+ K G+ G+ Y LG+++ C + S DGQYC
Sbjct: 117 FDSLGKPAAGITDGNYYWLGDYELCAALASDG----SFDGQYC 155
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.056
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 17 FDASAKSPQGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYC 59
FD+ K G+ G+ Y LG+++ C + S DGQYC
Sbjct: 117 FDSLGKPAAGITDGNYYWLGDYELCAALASDG----SFDGQYC 155
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.056
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 17 FDASAKSPQGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYC 59
FD+ K G+ G+ Y LG+++ C + S DGQYC
Sbjct: 117 FDSLGKPAAGITDGNYYWLGDYELCAALASDG----SFDGQYC 155
>AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical
protein Y39H10A.2 protein.
Length = 740
Score = 29.1 bits (62), Expect = 0.39
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 3 AIPQDNRRIEIFPVFDASAKSPQGLLFGSSYHLGNFDECVGIE-DSNDNGVSVDGQY 58
++ R+ + P+ DA+ K G++ G G F EC I+ S+ +V G Y
Sbjct: 104 SMTDQERKDYLIPMMDAAGKLGSGIVRGHILSTGAFSECKSIQMFSSSLNRTVQGDY 160
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 26 GLLFGSSYHLGNFDECVGIE---DSNDNGVSVD 55
G+ +G+S HLG +E +G E D D V+VD
Sbjct: 1487 GMTWGTSGHLGGDEESIGGEAAPDWIDEDVNVD 1519
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 48 NDNGVSVDGQYCLATIKWQHEEN 70
N G+ +G YCL T +H EN
Sbjct: 869 NVTGIIREGAYCLITPTMRHVEN 891
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical
protein F44E2.2a protein.
Length = 2175
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 48 NDNGVSVDGQYCLATIKWQHEEN 70
N G+ +G YCL T +H EN
Sbjct: 772 NVTGIIREGAYCLITPTMRHVEN 794
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical
protein F44E2.2b protein.
Length = 2186
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 48 NDNGVSVDGQYCLATIKWQHEEN 70
N G+ +G YCL T +H EN
Sbjct: 783 NVTGIIREGAYCLITPTMRHVEN 805
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 13 IFPVFDASAKSPQGLLFGSSYHLGNFDECVGIE-DSNDNGVSVDGQY 58
+ P+ DA+ K G+ G G F EC + S ++ G Y
Sbjct: 110 LIPMMDAAGKIGSGIARGHILSAGAFTECKSVSMHSTSLNRTIRGDY 156
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,135,031
Number of Sequences: 27539
Number of extensions: 79691
Number of successful extensions: 128
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 11
length of query: 75
length of database: 12,573,161
effective HSP length: 55
effective length of query: 20
effective length of database: 11,058,516
effective search space: 221170320
effective search space used: 221170320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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