Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000859-TA|BGIBMGA000859-PA|IPR002160|Proteinase
inhibitor I3, Kunitz legume
(75 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g39180.1 68418.m04742 germin-like protein, putative similar t... 26 3.5
At5g39150.1 68418.m04736 germin-like protein, putative similar t... 26 3.5
At5g39120.1 68418.m04733 germin-like protein, putative similar t... 26 3.5
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb... 26 3.5
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 25 4.6
At1g55325.1 68414.m06320 expressed protein 25 4.6
At1g30700.1 68414.m03753 FAD-binding domain-containing protein s... 25 6.1
At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin... 25 6.1
At5g05790.1 68418.m00637 myb family transcription factor contain... 25 8.0
At4g20830.2 68417.m03022 FAD-binding domain-containing protein s... 25 8.0
At4g20830.1 68417.m03023 FAD-binding domain-containing protein s... 25 8.0
>At5g39180.1 68418.m04742 germin-like protein, putative similar to
germin-like protein (GLP6) - Arabidopsis thaliana,
EMBL:U75194 [SP|P92997]
Length = 221
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 39 DECVGIEDSNDNGVSVDGQYC 59
D CV I+D NGV V+G++C
Sbjct: 29 DFCVAIDDPK-NGVFVNGKFC 48
>At5g39150.1 68418.m04736 germin-like protein, putative similar to
germin -like protein GLP6, Arabidopsis thaliana,
EMBL:ATU75194 [SP|P92997]; contains PS00725 Germin
family signature
Length = 221
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 39 DECVGIEDSNDNGVSVDGQYC 59
D CV I+D NGV V+G++C
Sbjct: 29 DFCVAIDDPK-NGVFVNGKFC 48
>At5g39120.1 68418.m04733 germin-like protein, putative similar to
germin -like protein GLP6, Arabidopsis thaliana,
EMBL:ATU75194 [SP|P92997]
Length = 221
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 39 DECVGIEDSNDNGVSVDGQYC 59
D CV I+D NGV V+G++C
Sbjct: 29 DFCVAIDDPK-NGVFVNGKFC 48
>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
(RbohE) / NADPH oxidase nearly identical to respiratory
burst oxidase protein E GI:3242787 [gi:3242787] from
[Arabidopsis thaliana]
Length = 926
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 37 NFDECVGIEDSNDNGVSV 54
+F ECVG+ DS D VSV
Sbjct: 220 DFGECVGMVDSKDFAVSV 237
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 NRRIEIFPVFDASAKSPQGLLFGSSYHLG 36
N RI I PV D + S Q + SSY G
Sbjct: 347 NGRINIAPVLDPAPSSAQKYHYDSSYQPG 375
>At1g55325.1 68414.m06320 expressed protein
Length = 1921
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 28 LFGSSYHLGNFDECVGIEDSNDN 50
L SSY L F +C+G+ S DN
Sbjct: 208 LKNSSYRLPAFRKCLGLAKSEDN 230
>At1g30700.1 68414.m03753 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 527
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 25 QGLLFGSSYHLGNFDECVGIEDSNDNG 51
+G +G Y GNF+ V I+ D+G
Sbjct: 488 EGKRYGKKYFAGNFERLVKIKTRVDSG 514
>At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin
family protein contains Pfam profile: PF03177
non-repetitive/WGA-negative nucleoporin
Length = 1464
Score = 25.0 bits (52), Expect = 6.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 37 NFDECVGIEDSNDNGVSVDG 56
NF+ V ++DS+ NG +DG
Sbjct: 1187 NFESSVAMQDSDQNGQVLDG 1206
>At5g05790.1 68418.m00637 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 277
Score = 24.6 bits (51), Expect = 8.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 47 SNDNGVSVDGQYCLATIKWQHEENKDF 73
++D+ V CL + W EENK F
Sbjct: 13 TSDHRFVVQEMMCLQSSSWTKEENKKF 39
>At4g20830.2 68417.m03022 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 540
Score = 24.6 bits (51), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 16 VFDASAKS-PQGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYCLATIK 64
V D A S +G ++G Y NFD V I+ + D G + + T+K
Sbjct: 488 VNDHGANSYKEGEVYGRKYFGENFDRLVKIKTAVDPGNFFRNEQSIPTLK 537
>At4g20830.1 68417.m03023 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 570
Score = 24.6 bits (51), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 16 VFDASAKS-PQGLLFGSSYHLGNFDECVGIEDSNDNGVSVDGQYCLATIK 64
V D A S +G ++G Y NFD V I+ + D G + + T+K
Sbjct: 488 VNDHGANSYKEGEVYGRKYFGENFDRLVKIKTAVDPGNFFRNEQSIPTLK 537
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.137 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,046,326
Number of Sequences: 28952
Number of extensions: 77279
Number of successful extensions: 110
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 11
length of query: 75
length of database: 12,070,560
effective HSP length: 55
effective length of query: 20
effective length of database: 10,478,200
effective search space: 209564000
effective search space used: 209564000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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