Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000858-TA|BGIBMGA000858-PA|IPR006621|Nose resistant to
fluoxetine-4, N-terminal
(1355 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 40 0.002
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.013
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 32 0.48
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 32 0.63
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 32 0.63
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 31 0.83
SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1 |Schizosa... 31 1.5
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 30 1.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 1.9
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 30 2.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 2.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 30 2.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 3.4
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 29 3.4
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 29 3.4
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 29 4.4
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 29 4.4
SPCC4B3.09c |||mitochondrial ribosomal protein subunit L12|Schiz... 29 4.4
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 29 4.4
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 5.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 5.9
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 29 5.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 29 5.9
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 29 5.9
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 7.7
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 28 7.7
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 7.7
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 7.7
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 40.3 bits (90), Expect = 0.002
Identities = 43/258 (16%), Positives = 91/258 (35%), Gaps = 11/258 (4%)
Query: 194 KKKTDLPKSYS-TATFKISETKNKLEKRFXXXXXXXXXXXXXXXXRLSKFSRKQTKNTEA 252
K KT + KS TA+ K + K K+ K S+K+ K +
Sbjct: 4 KDKTSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASS 63
Query: 253 KNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLKATEXXXXXXXXXXXX 312
K +V ++KS K +S+ E S+ + ++ + S +E
Sbjct: 64 PEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESE 123
Query: 313 XXXXXXXXXQHLAKHDVDLRSNENFEKDK----NNARSKIKDSNIPEKFDSTESKRNKVS 368
+ + + S E++ + DS+ +ES+ +
Sbjct: 124 EEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSE 183
Query: 369 DTQAKKAID---EKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALSSSKEDQEPNKEK 425
+ ++ ++ EK + S +DS + SSS+++++ E
Sbjct: 184 SEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEP 243
Query: 426 QSKD---QLLAPSEESED 440
S++ ++ PS++S +
Sbjct: 244 ASEERPAKITKPSQDSNE 261
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 37.5 bits (83), Expect = 0.013
Identities = 43/295 (14%), Positives = 95/295 (32%), Gaps = 10/295 (3%)
Query: 241 KFSRKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLKATE 300
K S+K +A + + + S + S+E S ED + +S + D S ++E
Sbjct: 85 KISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSS--SSSDSESESSSE 142
Query: 301 XXXXXXXXXXXXXXXXXXXXXQHLAKHDVDLRSNENFEKDKNNARSKIKDSNIPEKFDST 360
+ + S+ + D +++ S + + E DS+
Sbjct: 143 DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE-DNDSSSSSSDSESESSSEDSDSS 201
Query: 361 ESKRNKVSDTQAK---KAIDEKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALSSSKE 417
S + S++ ++ + S + + S D+ + + SSS
Sbjct: 202 SSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 261
Query: 418 DQEPNKEKQSKDQLLAPSEESEDFQTSTFWSPLTFFLTDNSKEKDDIESPPPKKDFXXXX 477
+ E + + + SE+ +S S + +D++ D +S +D
Sbjct: 262 ESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNT 321
Query: 478 XXXXXXXXXXXXXXXXXXXXXXXXXXLDDKAEVKIKTTDTSIKTEKRSENMKTKT 532
+D +++ D S+K + + T T
Sbjct: 322 DTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIH----DKSLKRKHEDDESSTST 372
Score = 33.9 bits (74), Expect = 0.16
Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 8/207 (3%)
Query: 240 SKFSRKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLKAT 299
S+ S + ++ + ++ + S ++ + S+ E S +G +S + + S ++
Sbjct: 173 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE-SESSS 231
Query: 300 EXXXXXXXXXXXXXXXXXXXXXQHLAKHDVDLRSNENFEKDKNNARSKIKDSNIPEKFDS 359
E + D + S+ +N+ DS+
Sbjct: 232 EDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSE 291
Query: 360 TESKRNKVSDTQAKKAID-EKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALSSSKED 418
+ES T + D S +D S TD+ E S+S +D
Sbjct: 292 SESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEE---STSVKD 348
Query: 419 QEPNKEKQSKDQLLAPSEESEDFQTST 445
++ +K D+ L E ++ TST
Sbjct: 349 EDSSK---IHDKSLKRKHEDDESSTST 372
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 32.3 bits (70), Expect = 0.48
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 4/141 (2%)
Query: 244 RKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLKATEXXX 303
R+ + + + EEK +EK+ +A+ N + ++E +R + K K + KA
Sbjct: 571 REAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKR--- 627
Query: 304 XXXXXXXXXXXXXXXXXXQHLAKHDVDLRSNENFEKD-KNNARSKIKDSNIPEKFDSTES 362
+ AK + + ++ E++ K A K K E
Sbjct: 628 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEE 687
Query: 363 KRNKVSDTQAKKAIDEKSKKD 383
K + ++ AK+ +E+ K++
Sbjct: 688 KVKRETEENAKRKAEEEGKRE 708
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 269 KAQSNEEIHSKEDGERNSGLKTKDKPSLKATEXXXXXXXXXXXXXXXXXXXX-XQHLAKH 327
+ Q E +K E + L+ ++ +A E + AK
Sbjct: 536 RIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKR 595
Query: 328 DVDLRSN-ENFEKDKNNARSKIKDSNIPEKFDSTESKRNKVSDTQAKKAIDEKSKKDQPS 386
+ + + E EK K A K K + E K + ++ +AK+ +EK+K++
Sbjct: 596 EAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEE 655
Query: 387 K 387
K
Sbjct: 656 K 656
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/152 (17%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Query: 241 KFSRKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLKA-T 299
K R+ +N + + EEK +EK+ +A+ + ++E +R + K K + KA
Sbjct: 592 KAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKR 651
Query: 300 EXXXXXXXXXXXXXXXXXXXXXQHLAKHDVDLRSNENFEKD-KNNARSKIKDSNIPEKFD 358
E + A+ + + E +++ + NA+ K ++ E
Sbjct: 652 EAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADK 711
Query: 359 STESKRN-KVSDTQAKKAIDEKSKKDQPSKTD 389
+ E K + ++ ++A +++ +P D
Sbjct: 712 NPEIKSSAPLASSEANVDTSKQTNATEPEVVD 743
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 31.9 bits (69), Expect = 0.63
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 328 DVDLRSNENFEKDK--NNARSKIKDSNIPEKFDSTESKRNKVSDTQAKKAIDEKSKKDQP 385
D D S ++ E+++ ++ K DS+ E+ ES + S++ +++ E+S+ + P
Sbjct: 11 DSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVP 70
Query: 386 SKTDSIXXXXXXXXXXXXXXXXXELALSSSKEDQEPNKEKQSKDQLLAPSEE---SEDFQ 442
K E + S+ED E + E +S+ + + SEE SE+
Sbjct: 71 KKK----AVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEES 126
Query: 443 TSTFWSPLTFFLTDNSKEK 461
+ S + FL KE+
Sbjct: 127 DESERSGPSSFLKKPEKEE 145
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 571 SRELKDENDSGGRNFEKKTK-EDSKKQETLGDEYKLLETMKEFKVERS-KKCTEKQYIKN 628
+ EL+ + D + + K K E+S ++E + DE L K +V R KK + K+ KN
Sbjct: 719 NEELERKLDKVLEDADAKVKDEESSEEELMNDEQMLALDEKLAEVFRERKKASNKEKKKN 778
Query: 629 SRESTEKLVDGK 640
++E+ +++V K
Sbjct: 779 AQETKQQIVQFK 790
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 31.5 bits (68), Expect = 0.83
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 354 PEKFDSTESKRNKVSDTQAKKAIDEKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALS 413
PE + SK N + TQ +KS T S ++
Sbjct: 637 PETGPNKPSKNNILKSTQVPVTPKQKSSTANKGSTSSPSPPSSESKKTKRSWGRLFVSGD 696
Query: 414 SSKEDQEPNKEKQ--SKDQLLAPSEESEDFQTSTFWSPLTFFLTDNSKEKDDI---ESPP 468
S KE +E K+KQ DQ+ + S+ + F+ + L + K++ +I S P
Sbjct: 697 SDKEHKEHKKDKQKKKNDQISSSSKSASSFKKDRDKESIFGSLFGSKKKQTEIPPVSSSP 756
Query: 469 PKKD 472
P D
Sbjct: 757 PHND 760
>SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 562 EQATSKVLISRELKDENDSGGRNFEKKTKEDSKKQETLGDEYKLLETMKEFKVERSKKCT 621
E + ++ + +E D++D G N E++ K+D KKQ T D + KE + S + T
Sbjct: 274 EPSQERLPVEKEQNDKSDEEGSNNEQEEKQD-KKQSTNRDLCRKESCKKEPSLSSSDQVT 332
Query: 622 E 622
+
Sbjct: 333 K 333
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 240 SKFSRKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSLK 297
SK K+ +NT+++ E+K N K K L A + + + +G +N L D+P+ +
Sbjct: 79 SKAGAKEKQNTDSQKEKKQN---KSKEAL-ADAKDPLDESSNGIKNLSLNKNDEPAFQ 132
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 583 RNFEKKTKEDSKKQETLGDEYKLLET-MKEFKVERSKKCTEKQYIKNSRESTEKLVDGKE 641
RN EKK + +++ + L DE KLLE + + K +K + + + S + + + +
Sbjct: 67 RNSEKKLLQSNERYDLLEDERKLLENELSQIKEYLREKSSSYDTVLHDCSSLKSVNEALK 126
Query: 642 VKSGSHLKQMNDALQRRNLLKSE 664
+LKQ Q +NLL +
Sbjct: 127 QAQDQNLKQ---TAQLQNLLSDK 146
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 607 ETMKEFKVERSKKCTEKQYIKNSRESTEKLVDGKEVKSGSHLK---QMNDALQR 657
+ +K+ ++ + + +E+Q +S+E + +V +E KS K Q NDA+ +
Sbjct: 114 DNLKDLELPKDEASSEEQSFSSSKEEVKPIVQDRETKSNVEHKSTSQANDAVNK 167
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 556 ISHKSVEQATSKVLISRELKDENDSGGRNFEKKTKEDSKKQETLGDEYKLLETMKEFKVE 615
I + ++ S++ I+ E ++ + NF +K KE+ + ++L + LE++ + + E
Sbjct: 279 IINTTINDLKSQMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRE 338
Query: 616 RSKKCT-EKQYIKNSRESTEKL 636
+K T + I+ ES EKL
Sbjct: 339 LLEKLTGDLGKIQGEIESLEKL 360
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.9 bits (64), Expect = 2.5
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 243 SRKQTKNT-EAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGERNSGLKTKDKPSL-KATE 300
SRKQ T E +EE++ S+ + +L ++ + + + E+ D+P++ K
Sbjct: 338 SRKQAARTLETVSEEQMGSSNAKSKVLTSEPKDS--TSVEAEKTE----TDEPAVGKGAS 391
Query: 301 XXXXXXXXXXXXXXXXXXXXXQHLAKHDVDLRSNENFEKDKNNARSKIKDSNIPEKFDST 360
K DV E KD+NN S KD + +
Sbjct: 392 DVSDTAEISEKTEAKNADSEANLEEKSDV---GEEKESKDENNKASLHKDVEEKDTKITN 448
Query: 361 ESKRNKVSDTQAKKAIDEKSKKDQPSKTDS 390
E +D +AK+ D D+ KTDS
Sbjct: 449 EDTGKTETDVKAKET-DSIEANDKDEKTDS 477
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 597 ETLGDEYKLLETMKEFKVERSKKCTEKQYIKNSRESTEKLVDGKEVKSGSHLKQMNDALQ 656
E+L D+ L+T E V SK+ Y+ N +E +D K L++ L
Sbjct: 697 ESLNDQLSQLKTEME-SVTTSKESLA-DYLSNLKERHNDELDSLNKK----LREFEGILS 750
Query: 657 RRNLLKSEFDDFYTFFPTFAPNFSRIHN 684
+ LKSE ++ + T NF + N
Sbjct: 751 SNSSLKSEIEERNNQYVTLRENFDSLQN 778
Score = 28.3 bits (60), Expect = 7.7
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 556 ISHKSVEQATSKVLISRELKDEN--DSGGR--------NFEKKTKEDSKKQETLGDEYKL 605
++H SV ++ R+LKDEN D G + E+ KE + ETL E K
Sbjct: 788 VTHCSVNHLVQQI---RKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLVSEKKE 844
Query: 606 LETMKEFKVERSKKCTEKQYIKNSRESTEKLVDGKEVKS-GSHLKQMNDALQRRNLLKSE 664
L+ + + + RSKK + + S ++ + + G S S +++ LK +
Sbjct: 845 LKNLLDAE-RRSKKAIQLELENLSSQAFRRNLSGSSSPSERSQSRELKLLQASEKRLKEQ 903
Query: 665 FDDFYTFFPTFAPNFSRIH 683
++ + F++++
Sbjct: 904 VEERNSLIKNIVTRFTQLN 922
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 356 KFDSTESKRNKVSDTQAKKAIDEKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALSSS 415
K D + K++ D + K + + +KK+Q ++ L
Sbjct: 18 KQDEEKKKKDAEEDEKWSKGV-KTNKKEQEAEKRKAALERKAERERLEKEEMESLPSKGG 76
Query: 416 KEDQEPNKEKQSKDQLLAPSEESEDFQTSTFWSPLTFFLTDNSKEKDDIESPPPKK 471
K ++ K+ S D L + ++ + L +NS KD I+ P ++
Sbjct: 77 KGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKIDRHPERR 132
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 242 FSRKQTKNTEAKNEEKINVSHKEKSLLKAQSNEEIHSKEDGE 283
FS ++ +N NEE +++H EK + ++NE + E+ E
Sbjct: 123 FSGQKIENKYTVNEENSSIAHPEKESEEKETNEASPASEEDE 164
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 576 DENDSGGRNFEKKTKEDSKKQETLGDEYKLLETMKEFKVERSKKCTE-----KQYIKNSR 630
D++ EKK+K + +K L DE K T E +ER KK +Q +K SR
Sbjct: 6 DKSSHSKPKIEKKSKRNKRKW--LNDENKTHVTASEAAIERLKKSASFSQAAQQALKQSR 63
Query: 631 -ESTEKLVDGKEV 642
E E+ ++ ++V
Sbjct: 64 KEDNERDIEMQDV 76
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 31 PKVSHDSAKKEHCDDCEAKVGHKLNSVRIDSDKRPNVETKNDVREKLEQTNKKPLEP 87
PK++ + K D + N+ + ++D+ + KN+VR KL P P
Sbjct: 53 PKITENVDAKSEQDKATNTIAEDANTKQSENDESNLIPNKNEVRVKLADLQADPNSP 109
>SPCC4B3.09c |||mitochondrial ribosomal protein subunit
L12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 206
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 695 LRQLRGTKLWALNMLDATAKIPAGILQGNGIQLGDFDQCLSSRARVQLDTGSVVK 749
LR L +K WA ++++ + A +Q N Q+G+ +SS + L+T +VK
Sbjct: 45 LRALSSSKNWARSLVNTRSFRAAASVQNNNAQIGEMVDKISSLS--LLETSELVK 97
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 322 QHLAKHDVDLRSNENFEKDKNNARSKIKDSNIPEKFDSTESKRNKVSDTQAKKAIDEKSK 381
+ LAK R +N ++++ +R D EK D T++ KVSD + + S+
Sbjct: 292 EKLAKRTQSFRREDNANRERSTSRKPSADK--AEKTDKTDAIAEKVSDIRLGDGEKKSSE 349
Query: 382 KD 383
D
Sbjct: 350 TD 351
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 570 ISRELKDENDSGGRNFEKKTKEDSKKQETLGDEYKLLETM--KEFKVERSKKCTEKQYIK 627
+ +L+ NDS ++ +E +K+ TL D Y+LLE + E ++ +C+E +
Sbjct: 1769 LKSQLESNNDS--EEVRQEYEELTKRIVTLSDHYRLLEYLLKDESSCSQASQCSENGQVD 1826
Query: 628 NSRESTEKLV 637
S S + V
Sbjct: 1827 LSYASLSESV 1836
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 5.9
Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 3/149 (2%)
Query: 328 DVDLRSNENFEKDKNNARSKIKDSNIPEKFDSTESKRNKVSDTQAKKAIDEKSKKDQPSK 387
D+D N+ E N+ K+ D E TE K N+ S + + K ++ +
Sbjct: 3983 DLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALE 4042
Query: 388 TDSIXXXXXXXXXXXXXXXXXELALSSSKEDQEPNKEKQSKDQL---LAPSEESEDFQTS 444
E+ + + +P E + L L E+ D
Sbjct: 4043 DKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKD 4102
Query: 445 TFWSPLTFFLTDNSKEKDDIESPPPKKDF 473
+ + D +KE+ D E P +DF
Sbjct: 4103 SDLEDMDMEAADENKEEADAEKDEPMQDF 4131
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 584 NFEKKTKEDSKKQETLGDEYKLLETMKEFKVERSKKCTEKQYIKNSRESTEK 635
N + K + K+ LG++ K L K+E+ ++ +K+ + +RE+ EK
Sbjct: 10 NLSLEAKNEKPKEVILGEDGKPLSKKALKKLEKEREKEQKRKEREAREAEEK 61
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 561 VEQAT-SKVLISRELKDENDSGGRNFEKKTKEDSKKQETLGDEYKL----LETMKEFKVE 615
+EQA SK ISR R + + D K+ + + KL LE +
Sbjct: 753 IEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAAL 812
Query: 616 RSKKCTEKQYIKNSRESTEKLVDGKEVKSGSHLKQMNDALQRRNLLKSEFDD 667
+ + + +N R ++ DGK + +G L Q+ A L + +DD
Sbjct: 813 QKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRKFYDD 864
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 358 DSTESKRNKVSDTQAKKAIDEKSKKDQPSKTDSIXXXXXXXXXXXXXXXXXELALSSSKE 417
+ T SKR + S+ K+K + S + + LALSS
Sbjct: 107 NKTFSKRKRSSENSFNNR--NKAKSSETSDSSNTSQSFKENRALKDTATSRPLALSSDTS 164
Query: 418 DQEPNKEKQSKDQLLAPSEESE 439
Q+ K K K L+ S+ S+
Sbjct: 165 YQKSEKAKSEKSPFLSTSKNSD 186
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 7.7
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 506 DKAEVKIKTT-DTSIKTEKRSENMKTKTIPQEIXXXXXXXXXXXXXXXXXXISHK--SVE 562
D+ E ++KT D + + +K+ + +K + +S + ++E
Sbjct: 147 DELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALE 206
Query: 563 QATSKVLISRELKDENDSGGRNFEKKTKEDSKKQETLGDEYKLLETMKEFKV--ERSKKC 620
+ SK+LI EN+ R + KED K+ E +LL+ + K ER+ K
Sbjct: 207 EFQSKLLIR-----ENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKL 261
Query: 621 TEKQYIKNSR----ESTEK-LVDGKEVKSGSHLKQMNDALQRRNLLKS 663
+E N+R E EK + + +S K N +++ L+ S
Sbjct: 262 SEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINS 309
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 332 RSNENFEKDKNNARSKIKDSNIPEKFDS--TESKRNKVSDTQAKKAIDEKSKKDQPSK 387
R +K+K + K+K + K D T+ ++ KV D ++KK+ KK +K
Sbjct: 141 REKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLKKVSGTK 198
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 600 GDEYKLLETMKEFKVERSKKCT---EKQYIKNSRESTEKLVDGKEVKSGSHLKQMNDALQ 656
GD+YK +ET+ + K CT E+ Y + +E E +D + + Q L
Sbjct: 284 GDDYKAVETIHKIARINGKTCTLTVEELYAIDRQEQEESDLDDSKSSDAKSVTQGTTNLI 343
Query: 657 RRNLLKSEFD 666
L K F+
Sbjct: 344 VEKLRKYNFE 353
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 328 DVDLRSNENFEKDKNNARSKIKDSNIPEKFDSTESKRNKVSDTQAKKAIDEKSKKD 383
D + ++ EN++K + ++ K+ + KF+ K + TQ K + +++D
Sbjct: 50 DQEQQAYENWKKQEQEEINRKKEEELKSKFEKLRQKNERRRRTQGKTLAETLAEED 105
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,286,607
Number of Sequences: 5004
Number of extensions: 204533
Number of successful extensions: 899
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 63
length of query: 1355
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1273
effective length of database: 1,952,150
effective search space: 2485086950
effective search space used: 2485086950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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