GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000857-TA|BGIBMGA000857-PA|undefined
         (63 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QAS3 Cluster: Putative uncharacterized protein; n=3; ...    32   2.6  
UniRef50_Q4QBS5 Cluster: Putative uncharacterized protein; n=4; ...    31   4.5  
UniRef50_Q01FA8 Cluster: Predicted methyltransferase; n=3; Ostre...    31   5.9  

>UniRef50_Q4QAS3 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1789

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 8   MARYLSTVEPTAMEAKTVQPMVLAFQNRSIRGKSLRTAACPYRSDACASDTRSIPT 63
           +A  +   +   M AK V P+VLA QN + R K   TA       + A    S+P+
Sbjct: 450 LALAMQLTQAALMRAKRVLPLVLAVQNAAKRNKRTSTAGDAAAGGSAAETVVSLPS 505


>UniRef50_Q4QBS5 Cluster: Putative uncharacterized protein; n=4;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1166

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 13  STVEP-TAMEAKTVQPMVLAFQNRSIRGKSLRTAACPYRSDA 53
           +TV P +++EA    P+   F +R  +G   RTAA PYRS A
Sbjct: 350 TTVSPASSIEASLAAPLS-TFSSRHAKGYGDRTAAAPYRSRA 390


>UniRef50_Q01FA8 Cluster: Predicted methyltransferase; n=3;
           Ostreococcus tauri|Rep: Predicted methyltransferase -
           Ostreococcus tauri
          Length = 399

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 12  LSTVEPTAMEAKTVQPMVLAFQNRSIRGKSLRTAACPYRSDACASDTRSIP 62
           LS + P++   +   P  +  + R +    L  A+ PYR   CAS TRS P
Sbjct: 242 LSVLAPSSWNHQPTCPAPICLRFRRV-ASPLVAASRPYRRSLCASTTRSAP 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.124    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,676,443
Number of Sequences: 1657284
Number of extensions: 1313696
Number of successful extensions: 2607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2606
Number of HSP's gapped (non-prelim): 3
length of query: 63
length of database: 575,637,011
effective HSP length: 43
effective length of query: 20
effective length of database: 504,373,799
effective search space: 10087475980
effective search space used: 10087475980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 65 (30.3 bits)