GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000853-TA|BGIBMGA000853-PA|IPR011051|Cupin, RmlC-type,
IPR003101|Coactivator CBP, KIX, IPR001487|Bromodomain,
IPR010303|Protein of unknown function DUF902, CREBbp,
IPR009255|Transcriptional coactivation, IPR000433|Zinc finger,
ZZ-type, IPR000197|Zinc finger, TAZ-type, IPR001965|Zinc finger,
PHD-type, IPR006089|Acyl-CoA dehydrogenase
         (1573 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          29   1.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         28   2.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   2.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   2.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   3.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   5.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   6.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   6.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   6.8  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   9.0  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 19/68 (27%), Positives = 26/68 (38%)

Query: 285 IRIPSPGIALSMPTARLPFQNNLVGPPGPSPNQMGQTSNGSVGSVGAPGMSPFGSLTSPA 344
           +RI S  ++  +PT      N  VGP G      G    G  G +G+   +    L  P 
Sbjct: 518 LRISSGNVSSEIPTVIQNDPNGPVGPAGVGGGGGGGGGGGGGGVIGSGSTTRLPPLHQPF 577

Query: 345 PHYAQTNG 352
           P  A   G
Sbjct: 578 PMLANHAG 585



 Score = 26.6 bits (56), Expect = 5.2
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 302 PFQNNLVGPPGPSPNQMGQTSNGSVGSVGAPGMSP---FGSLTSPAPHYAQTNGPAPLAS 358
           P Q  ++    PSP+    ++  +V SVG   + P   + S  SP+   A  + P+ +AS
Sbjct: 25  PIQYTVLSMDTPSPSS--SSAAAAVVSVGEFTLGPGRTYASALSPSSSSASPSSPSSVAS 82

Query: 359 P 359
           P
Sbjct: 83  P 83


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 775 ETRVNNFLKKKEAGAGEVHIRVVASSDKI 803
           E+R NNF +K+ AG G  H R   ++D +
Sbjct: 513 ESRANNFRRKRFAGGGHSHHRSNDTTDAL 541


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 291 GIALSMPTARLPFQN-NLVGP-PGPSPNQMGQTSNGSVGSVGAPGMSPFGS--LTSPAPH 346
           G+ LS   A    QN +L G  P P+   +  ++ GS   V     SP G   L SP+PH
Sbjct: 663 GLNLSHTAALANAQNLSLAGHIPPPAHGSLNLSAGGS--PVAVVSSSPTGGHHLASPSPH 720

Query: 347 YAQTN-GPAPLASPTHQHIDTN 367
           +  T+   APLA  + +   T+
Sbjct: 721 HHLTSPHGAPLALTSSKSASTH 742


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)

Query: 306 NLVGPPGP--SPNQMG-QTSNGSVGSVGAPGMSPFGSLTSP 343
           ++VGPPGP  +P   G +   G +G  G PG+   GSL  P
Sbjct: 101 SMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLP--GSLGYP 139


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 22/127 (17%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 417 QHEQSPQQQEEIRVKQXXXXXXXXXXXXDDCGGKGMRDEIVSQKDSSEPDFMVKQEIKQ- 475
           QH+Q  QQQ++ + +Q                 +  + +   Q+   +    V+Q+ +Q 
Sbjct: 228 QHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQH 287

Query: 476 EIKQEAKQEVKQETKLEVKAEI------KEEPTESTTDLNNADRGTRKIFVFKPEDLRQA 529
           + +Q+ +Q+ +Q+ + + + E+      + + T+     N   +  ++   ++P  +RQ 
Sbjct: 288 QRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQ 347

Query: 530 LMPTLEQ 536
           L    +Q
Sbjct: 348 LQQQQQQ 354


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 309 GPPGPSPNQMGQTSNGSVGSVGAPG-MSPFGSLTSPAP 345
           G PGP      +   G  GSVG PG   P G    P P
Sbjct: 453 GRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGP 490


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 328 SVGAPGMSPFGSLTSPAPHYAQTNGPAPLASPTHQHIDTNK 368
           S  AP  + +G + SP+   +    PA  +SPT    D ++
Sbjct: 265 STSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYSR 305


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 328 SVGAPGMSPFGSLTSPAPHYAQTNGPAPLASPTHQHIDTNK 368
           S  AP  + +G + SP+   +    PA  +SPT    D ++
Sbjct: 265 STSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYSR 305


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 281  APLGIRIPSPGIALSMPTARLPFQNNLVGPPGPSPNQMGQ 320
            A L  ++P PGI  ++P+ ++  ++  V  P   P Q  +
Sbjct: 1745 AHLSFKVPPPGIEFTLPSPKIGIESLPVVDPPWMPRQQNK 1784


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
            calcium/calmodulin-dependentprotein kinase, CAKI protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 1190 VGSSPGDMKQANPQEARKQSIQRCIQSLVHACQCRDANC 1228
            +G++   + +   +EA  ++IQ+ + SL      +DANC
Sbjct: 310  IGAASESLNEWADEEAGLEAIQKILDSLDDIIALQDANC 348


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,259,261
Number of Sequences: 2123
Number of extensions: 50718
Number of successful extensions: 106
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 87
Number of HSP's gapped (non-prelim): 23
length of query: 1573
length of database: 516,269
effective HSP length: 73
effective length of query: 1500
effective length of database: 361,290
effective search space: 541935000
effective search space used: 541935000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)