Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000852-TA|BGIBMGA000852-PA|undefined
(342 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 33 0.29
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 3.6
Z74033-4|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 6.3
Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 2 ADEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFD-LEKDLPDELMGGPWGEQPGVPGPKP 60
++E P+K+P+ +++ S + GF +D + +E + D+ + G + PG K
Sbjct: 191 SEEVPDKKPESVKESTDSESSGSEHGFEKMDTAEKVEDECNDDEVAASNGTEEPEPGDK- 249
Query: 61 PAQGLGPGQMAPQQQLNG 78
A + P + Q+ ++G
Sbjct: 250 AADTVNPWETPRQEPVDG 267
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 2 ADEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFD-LEKDLPDELMGGPWGEQPGVPGPKP 60
++E P+K+P+ +++ S + GF +D + +E + D+ + G + PG K
Sbjct: 191 SEEVPDKKPESVKESTDSESSGSEHGFEKMDTAEKVEDECNDDEVAASNGTEEPEPGDK- 249
Query: 61 PAQGLGPGQMAPQQQLNG 78
A + P + Q+ ++G
Sbjct: 250 AADTVNPWETPRQEPVDG 267
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 5 PPNKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQG 64
P K P D GP+D GFS+ E ++P E+ V GP P +G
Sbjct: 203 PAPKLPDDSDDDDDGPTDFF--GFSSAPTRK-ESEIPSEIPYMTMNSSMDVVGPSRPDEG 259
Query: 65 LGPGQM--APQQQLN-GDDPAAA---MHRQINN 91
+ P QM P+++ + + P+A+ +HR+IN+
Sbjct: 260 MDPRQMYEMPEEEEDVQEGPSASNAWLHRKIND 292
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 3 DEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGPWGEQPGVPGPKPPA 62
D ++ P + + P ++ DG +L D E + + + P + PA
Sbjct: 63 DRTEDQVPDITGTEYVDPMTTSMDGIEDLPAND-EAQVEESAPADEPAPEEEKPQEEAPA 121
Query: 63 QGLGPGQMAPQQQLNGDDPAA 83
+ P + APQ+++ ++P A
Sbjct: 122 EEPAPAEEAPQEEVPAEEPVA 142
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 41 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAA 83
P G P + G P P PP +G P P Q G P A
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 41 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAA 83
P G P + G P P PP +G P P Q G P A
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 41 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAA 83
P G P + G P P PP +G P P Q G P A
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 47 GPWGEQPGVPG-PKPPAQGLGPGQMAPQQQLNGDDPAA 83
GP G PGV G P P Q PGQ AP + L +P A
Sbjct: 182 GPKGP-PGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGA 218
>Z74033-4|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 52 QPGVPGPKPPAQGLGPGQMAPQQQLNG 78
+P P P P QG PG PQQQ NG
Sbjct: 136 KPANPPPNAPQQG--PGAQPPQQQNNG 160
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/82 (25%), Positives = 26/82 (31%)
Query: 7 NKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLG 66
N P MI P D + F+L + D L + PKPP+Q
Sbjct: 841 NMGPTMISPPPAKVRPPAVDTYPRSSQFELVRSDSDHLPPSNTMMRVSCSPPKPPSQLPS 900
Query: 67 PGQMAPQQQLNGDDPAAAMHRQ 88
P Q N P H Q
Sbjct: 901 PNQTTIPHMYNNGIPMIYEHHQ 922
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 50 GEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAAA 84
G QPG PG PP + PG M P G P A
Sbjct: 573 GGQPGHPGMMPPGM-MPPGMMPPGMMPPGMHPGMA 606
>Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical
protein F43G6.7 protein.
Length = 87
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 43 ELMGGPWGE---QPGVPGPKPPAQGLGPGQMAPQQQLNG---DDPAAA 84
E+ GPW QP PG +P P + P Q G D PAAA
Sbjct: 11 EIGPGPWPSLESQPPAPGDQPVQGPADPAMLPPPHQQPGQAPDPPAAA 58
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.132 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,412,615
Number of Sequences: 27539
Number of extensions: 314960
Number of successful extensions: 869
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 863
Number of HSP's gapped (non-prelim): 14
length of query: 342
length of database: 12,573,161
effective HSP length: 82
effective length of query: 260
effective length of database: 10,314,963
effective search space: 2681890380
effective search space used: 2681890380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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