GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000851-TA|BGIBMGA000851-PA|IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding, IPR001278|Arginyl-tRNA
synthetase, class Ic, IPR008909|DALR anticodon binding
         (365 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146718-1|AAO12078.1|  149|Anopheles gambiae odorant-binding pr...    25   2.5  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    24   7.6  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    24   7.6  

>AY146718-1|AAO12078.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP13 protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 153 KKCTEGCEHIKFGRIKGMSTRKGNAVFLNDILDEAKQKMYEKQMQSKNTRQSAMNEETCD 212
           +KC  GC   +FG   G + ++   + +  +L +  +   E   +     ++  N++ C+
Sbjct: 68  QKCLAGCMQEQFGVSNGKAFQEDGFIEIAKMLMKGDETKIELAKEIAADCKAVANDDRCE 127

Query: 213 ILGTTAVVINDLKQRRQR 230
           +      ++N LK+  ++
Sbjct: 128 L---AVDIMNCLKESAEK 142


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 34  KIRNVTVHELENVYQRLGI-TFDAFHWESDYNGIAIRDLMDYLQKHNIISND 84
           K++++ ++ +  + + +G+ T D     SD+   A+RD + Y  ++N+  ND
Sbjct: 159 KVKSLVINSMPRLAKLIGLRTLDPE--VSDFFMNAVRDTIKYRVENNVQRND 208


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 61  SDYNGIAIRDLMDYLQKHNIISND 84
           SD+   A+RD ++Y  K+N+  ND
Sbjct: 245 SDFFMNAVRDTINYRVKNNVQRND 268


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,204
Number of Sequences: 2123
Number of extensions: 13195
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 3
length of query: 365
length of database: 516,269
effective HSP length: 65
effective length of query: 300
effective length of database: 378,274
effective search space: 113482200
effective search space used: 113482200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)