Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000850-TA|BGIBMGA000850-PA|IPR001478|PDZ/DHR/GLGF
         (433 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   7.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   7.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)

Query: 243 NAMMIRSAFQGGANSPPYSPAKGPGKVY 270
           NA+ I S      NS P  P K   KVY
Sbjct: 98  NAVKILSKIDETLNSKPLKPVKIRTKVY 125


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)

Query: 243 NAMMIRSAFQGGANSPPYSPAKGPGKVY 270
           NA+ I S      NS P  P K   KVY
Sbjct: 94  NAVKILSKIDETLNSKPLKPVKIRTKVY 121


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.129    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,115
Number of Sequences: 317
Number of extensions: 2312
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 433
length of database: 114,650
effective HSP length: 59
effective length of query: 374
effective length of database: 95,947
effective search space: 35884178
effective search space used: 35884178
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)