GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000850-TA|BGIBMGA000850-PA|IPR001478|PDZ/DHR/GLGF
         (433 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   5.3  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 5.3
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 240 GGNNAMMIRSAFQGGANSPPYSPAKGPGKVYASVAEMKRSRAKLWSKCPGTLRREFHSTP 299
           GG +          G +S P  P    G   +S      S +   +  P  ++  +    
Sbjct: 140 GGGSGGNAHDHLADGLHSIPSPPITVSGSDMSSPGAPTGSSSPQITPRPTPVKSPYEWMK 199

Query: 300 DLAAELAPHPPRTRSTDDVHVHYDDE 325
             + +  P+P +TR+ D   V Y D+
Sbjct: 200 KQSYQSQPNPGKTRTKDKYRVVYTDQ 225


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.129    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,504
Number of Sequences: 2123
Number of extensions: 10508
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 1
length of query: 433
length of database: 516,269
effective HSP length: 66
effective length of query: 367
effective length of database: 376,151
effective search space: 138047417
effective search space used: 138047417
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)