Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000848-TA|BGIBMGA000848-PA|IPR007087|Zinc finger,
C2H2-type
(1130 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 43 1e-05
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 42 3e-05
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 42 3e-05
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 35 0.003
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 34 0.006
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 33 0.011
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 33 0.011
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 29 0.24
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.96
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 25 2.2
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 25 3.9
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 43.2 bits (97), Expect = 1e-05
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 933 AHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQI 992
AH+ G +VC W C GK L+RH +H G K F C + C +RF
Sbjct: 334 AHLRWHTGERPFVCNWLFC---GKRFTRSDELQRHLRTHTGEKRFACPI--CNKRFMRSD 388
Query: 993 LLERHVNNH 1001
L +HV H
Sbjct: 389 HLAKHVKTH 397
Score = 32.7 bits (71), Expect = 0.015
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 957 PSCSRLW-----LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
P C +++ L+ H H G +PF C C +RF+ L+RH+ H
Sbjct: 320 PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTH 369
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 41.5 bits (93), Expect = 3e-05
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 934 HVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQIL 993
H+ T +G + Y C+ C + + L H +H G KPF+C V C+RRFS
Sbjct: 12 HLRTHSGEKPYRCI--DCNKSFSQAAN---LTAHVRTHSGEKPFRCPV--CDRRFSQSSS 64
Query: 994 LERHVNNH 1001
+ H+ H
Sbjct: 65 VTTHMRTH 72
Score = 35.5 bits (78), Expect = 0.002
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 934 HVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQIL 993
H+ T +G Y C CK S + L +H H G KP++C + C RFS
Sbjct: 68 HMRTHSGERPYRC--RLCKKAFSDSST---LTKHLRIHSGEKPYECKL--CLLRFSQSGN 120
Query: 994 LERHVNNH 1001
L RH+ H
Sbjct: 121 LNRHMRVH 128
Score = 34.7 bits (76), Expect = 0.004
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L+ H +H G KP++CI C + FS L HV H
Sbjct: 9 LKTHLRTHSGEKPYRCI--DCNKSFSQAANLTAHVRTH 44
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 41.5 bits (93), Expect = 3e-05
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 934 HVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQIL 993
H+ T +G + Y C+ C + + L H +H G KPF+C V C+RRFS
Sbjct: 268 HLRTHSGEKPYRCI--DCNKSFSQAAN---LTAHVRTHSGEKPFRCPV--CDRRFSQSSS 320
Query: 994 LERHVNNH 1001
+ H+ H
Sbjct: 321 VTTHMRTH 328
Score = 39.5 bits (88), Expect = 1e-04
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 951 CKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
C++ GK L+ H +H G KP++CI C + FS L HV H
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCI--DCNKSFSQAANLTAHVRTH 300
Score = 35.5 bits (78), Expect = 0.002
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 934 HVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQIL 993
H+ T +G Y C CK S + L +H H G KP++C + C RFS
Sbjct: 324 HMRTHSGERPYRC--RLCKKAFSDSST---LTKHLRIHSGEKPYECKL--CLLRFSQSGN 376
Query: 994 LERHVNNH 1001
L RH+ H
Sbjct: 377 LNRHMRVH 384
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 35.1 bits (77), Expect = 0.003
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 949 SQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
+QC + + + L+ H +H G +PFKC + C R F+T+ L+ H+ H
Sbjct: 135 NQCVICHRVLSCKSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKTHMGVH 185
Score = 28.7 bits (61), Expect = 0.24
Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 950 QCKVRGKPSCSRLWLERHALSHGGNKPFKCI--VDGCERRFSTQILLERHVNNH 1001
+CK+ G+ ++ L+ H H P + + C ++F+ ++L++H+ H
Sbjct: 164 KCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLH 217
Score = 24.6 bits (51), Expect = 3.9
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 431 NLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSIGQ 482
N+Q+ P N+ N ++++ +P N + PP+ ++ S+GQ
Sbjct: 25 NMQD-EPENLSNKSNSITVPLSISTGQRLPANFSFGQVNSPPSSTSSGSLGQ 75
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.006
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 929 HIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRF 988
H+ H T G + + C +C R L+ H H G +P++C + C+R+F
Sbjct: 148 HVLQNHERTHTGEKPFEC--QECHKRFTRDHH---LKTHMRLHTGERPYRC--EHCDRQF 200
Query: 989 STQILLERHVNNH 1001
L RH+ H
Sbjct: 201 VQVANLRRHLRVH 213
Score = 33.1 bits (72), Expect = 0.011
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 951 CKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
C+V + + L+ H +H G KPF+C C +RF+ L+ H+ H
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFEC--QECHKRFTRDHHLKTHMRLH 185
Score = 31.5 bits (68), Expect = 0.034
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 914 EDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGG 973
E C ++F +L H+ G Y C C ++ S L+ H L H
Sbjct: 194 EHCDRQFVQVANL-----RRHLRVHTGERPYGC--EHCSMKFSDSNQ---LKAHVLIHTN 243
Query: 974 NKPFKCIVDGCERRFSTQILLERH 997
KPF+C D C RF + L H
Sbjct: 244 EKPFEC--DKCRGRFRRRHHLVHH 265
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.011
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNHFN 1003
LE H +H G+KPF+C + C+ + +L H+ +H N
Sbjct: 246 LEYHLRNHAGSKPFQC--NKCDYTCVNKSMLNSHMKSHSN 283
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 33.1 bits (72), Expect = 0.011
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNHFN 1003
LE H +H G+KPF+C + C+ + +L H+ +H N
Sbjct: 4 LEYHLRNHAGSKPFQC--NKCDYTCVNKSMLNSHMKSHSN 41
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 28.7 bits (61), Expect = 0.24
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 951 CKVRGKPSC-SRLWL-ERHALSHGGNKPFKCIVDGCERRFS 989
CK P SR WL + H +H G KPF C C R F+
Sbjct: 8 CKCTICPKAFSRPWLLQGHIRTHTGEKPFSCTY--CNRAFA 46
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.96
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 838 IDSPSDSQTSKECDEDSALSLSISLCSVDIQSQKSPILKQPKTLRFPPKSHLSKPGGNNK 897
+ +PS+S +K S LS+S S S S L P + S K G NN
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPAS-STSSTSSTEKAGTNNN 187
Query: 898 RKSSTDTTSTVLLCLW 913
S+ +++ + W
Sbjct: 188 NSKSSQSSNPPQIYPW 203
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.4 bits (53), Expect = 2.2
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 707 KTKKKCDIPWLSK-TVNNNIFSLDTNKISSRPFAEVGN--LSEKLEELAAVKIKDECYFN 763
K ++ D+PW++ T + ++ LD EV N L +L++ I Y+N
Sbjct: 306 KNQQVYDVPWIASFTKSEGLYHLD----------EVYNNQLLTRLDDNWNKYIPAILYYN 355
Query: 764 --IDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDV 808
+D+ ++ ++ Q+IRK Y E + ++ R T+F+ + D+
Sbjct: 356 YTVDRDLQ-DEVSQKIRKYYLGEKKLSKKTFRELVTMFSDRIFINDI 401
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 24.6 bits (51), Expect = 3.9
Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 10/66 (15%)
Query: 914 EDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGG 973
++C K F D H H+ G Y C C + + L RH H G
Sbjct: 13 QECHKRFTRD-----HHLKTHMRLHTGERPYRC--EHCDRQFVQVAN---LRRHLRVHTG 62
Query: 974 NKPFKC 979
+P+ C
Sbjct: 63 ERPYGC 68
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,085
Number of Sequences: 317
Number of extensions: 10299
Number of successful extensions: 43
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 20
length of query: 1130
length of database: 114,650
effective HSP length: 64
effective length of query: 1066
effective length of database: 94,362
effective search space: 100589892
effective search space used: 100589892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)
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