Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000848-TA|BGIBMGA000848-PA|IPR007087|Zinc finger,
C2H2-type
(1130 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 56 2e-08
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 54 9e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 5e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 39 0.003
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 38 0.008
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 36 0.042
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 35 0.074
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 35 0.074
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 34 0.098
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 33 0.23
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 32 0.39
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.39
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 32 0.52
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.69
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.91
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 31 0.91
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 1.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 1.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 1.6
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 2.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 2.1
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 30 2.1
SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces pomb... 30 2.1
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 2.8
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 29 2.8
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 29 2.8
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 29 3.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 4.9
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 29 4.9
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 29 4.9
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 29 4.9
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 29 4.9
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 29 4.9
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 29 4.9
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 28 6.4
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 28 6.4
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 6.4
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 28 6.4
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 28 8.5
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 28 8.5
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 8.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 911 CLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALS 970
C +E+C K++ P LL+ H+ T + +VC ++ C K + L+ H
Sbjct: 25 CPYEECGKKYSR-PSLLEQ----HLRTHSNERPFVCDYTGCS---KAFYRKSHLKIHKRC 76
Query: 971 HGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
H KPF C DGC+ +F TQ LERH+ H
Sbjct: 77 HTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 911 CLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERH-AL 969
C ++ C +F H++ H+E + Y C W C + L H +
Sbjct: 85 CHYDGCDAQFYTQ----QHLER-HIEVHRKPKPYACTWEGCD---ECFSKHQQLRSHISA 136
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERHVN 999
H P+ C CE RF+T+ L+ HVN
Sbjct: 137 CHTHLLPYPCTYQDCELRFATKQKLQNHVN 166
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 938 QAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERH 997
++ ++ + C + +C GK LE+H +H +PF C GC + F + L+ H
Sbjct: 17 RSAKKIFHCPYEEC---GKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Query: 998 VNNHFN 1003
H N
Sbjct: 74 KRCHTN 79
Score = 35.1 bits (77), Expect = 0.056
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 902 TDTTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSR 961
T + +C + C K F L H + H + + C + C + ++
Sbjct: 46 THSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHTNVKP----FSCHYDGCDAQ---FYTQ 97
Query: 962 LWLERHALSHGGNKPFKCIVDGCERRFSTQILLERHVN 999
LERH H KP+ C +GC+ FS L H++
Sbjct: 98 QHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHIS 135
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 26/114 (22%)
Query: 911 CLWEDCKKEFENDPDLLDHIQNAHV---------ETQAGRENYVCLWSQ----------- 950
C ++DC+ F L +H+ AH E+ G E + WSQ
Sbjct: 146 CTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFE-KWSQLQNHIREAHVP 204
Query: 951 -CKVRGKPSCSRLWLERHALSH----GGNKPFKCIVDGCERRFSTQILLERHVN 999
C + G+ + L H + H K + C ++GC++ F+ L++H++
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVET------------QAG--RENYVCLWSQCKVRG 955
+C W+ C+++ +L+ HI N G R Y C W C +G
Sbjct: 25 ICHWQSCEQDLLTLDNLVHHIHNGTTSNLRLISNINSILDHIGNRRPKYTCEWDDCPRKG 84
Query: 956 KPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERHV 998
SR L H SH G KPF C V C+R F+ L +H+
Sbjct: 85 MVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 966 RHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
RH SH G KPF+C C++RF+ + L RHV H
Sbjct: 21 RHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 966 RHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNHFN 1003
RH +H G KP C GC +RFS L RH H N
Sbjct: 43 RHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 37.9 bits (84), Expect = 0.008
Identities = 81/461 (17%), Positives = 150/461 (32%), Gaps = 23/461 (4%)
Query: 248 TKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKLEPKVNGIVSSTTSTRLDS 307
+ LTS+ + T+SS + TSA T S S+T+S+ S
Sbjct: 73 SSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASS 132
Query: 308 SMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRSNRKSSACIANSKNLTWSKANN 367
S+ + S++++ + + T + S A S +L+ + A+N
Sbjct: 133 SITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSS----ATSSSLSSTAASN 188
Query: 368 LKQVQKQKCANSPQNSPIXXXXXXXXXXXXXXXXXXXXXXXXGVRQVSMTMNGPLGSLNV 427
A+S NS ++ T + S ++
Sbjct: 189 --SATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLAS-SSLNSTTSATATSSSI 245
Query: 428 PVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSIGQQNGIS 487
+ + + PL + + + +S + +L + P+ S S
Sbjct: 246 S-STVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPS--STPSSTPLSSANSTTATS 302
Query: 488 AFNRPNVNVQSPTKLN-SQFVFPLMQNLNGTVVQLPNL--MTKMPNFMLQQASQ---LAM 541
A + P +V S T + S + + N T + ++ + + AS ++
Sbjct: 303 ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 542 QRQDHLQNQQSPQILVNGTLLKLGNTMTSAYPNMNKPTSVTNTIPMLN--KTVPGLQTVS 599
+P VN T ++ N TSV++T P N +P S
Sbjct: 363 NSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSS 422
Query: 600 VPVHS-KPNYAVNFSHPVLMPQPGFIMT---SVPNMNVKETWSYTGTNTVXXXXXXXXXT 655
P+ S A + S L T S P +V T + + ++T T
Sbjct: 423 TPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTAT 482
Query: 656 IMNHPPTVIANYATQALHSSSIPIAPVKPPDNPIQGTDPPS 696
+ P N +T A +SS P+ + + PS
Sbjct: 483 SASSTPLTSVN-STSATSASSTPLTSANSTTSTSVSSTAPS 522
Score = 34.3 bits (75), Expect = 0.098
Identities = 66/322 (20%), Positives = 103/322 (31%), Gaps = 21/322 (6%)
Query: 129 SYLSQTLSPKVLMDVEKQTEVASKHPAHSANGLLNTKSEAKKPSCKSKTNGLISFGNSKH 188
S +S T+S + T A+ A S++ NT S PS + L S NS
Sbjct: 243 SSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLL--PSSTPSSTPLSS-ANSTT 299
Query: 189 INEKVSTSMNGFVEMRHSVSDQFSKEKLPGILNGLLDGKQKNNELKNSVGPSTNGIVKIT 248
ST + V + S + N + L +SV +T T
Sbjct: 300 ATSASSTPLTS-VNSTTTTSASSTPLSSVSSANSTTATSTSSTPL-SSVNSTTATSASST 357
Query: 249 KLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKLEPKVNGI-----------V 297
LTS S + +S+ + + ATSA T +S V+
Sbjct: 358 PLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPT 417
Query: 298 SSTTSTRLDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRSNRKSSACIA-N 356
SS +ST L S+ + +++ L+ V T ++ S+ + N
Sbjct: 418 SSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477
Query: 357 SKNLTWSKANNLKQVQKQKCANSPQNSPIXXXXXXXXXXXXXXXXXXXXXXXXGVRQVSM 416
S T + + L V A S ++P+ VS
Sbjct: 478 STTATSASSTPLTSVNSTS-ATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSS 536
Query: 417 TMNGPLGSLNVPVNNLQNCHPL 438
T PL S N + PL
Sbjct: 537 T---PLSSANSTTATSASSTPL 555
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 35.5 bits (78), Expect = 0.042
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 890 SKPGGNNKRKSSTDTTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWS 949
S+ ++K KS + + + C + C K F +L H+ N H NY
Sbjct: 552 SENSSSSKAKSESKSQGNYV-CTFAGCNKRFTRAYNLKSHM-NTHT-------NYRPF-- 600
Query: 950 QCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERH 997
QC + K + RH H G K F C+ C +RF+ L RH
Sbjct: 601 QCSICKKSFARQHDKRRHEQLHTGIKAFACVT--CNQRFARMDALNRH 646
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 977 FKCIVDGCERRFSTQILLERHVNNHFN 1003
+ C GC +RF+ L+ H+N H N
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTN 596
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuclear
cluster type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 34.7 bits (76), Expect = 0.074
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L+ H SH G +PF C GC + F+ + + RH H
Sbjct: 483 LKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 34.7 bits (76), Expect = 0.074
Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 22/237 (9%)
Query: 568 MTSAYPNMNKPTSVTNTIPMLNKTVPGLQTVSVPVHSKPNYAVNFSHPVLMPQPGFIMTS 627
++S P M K SV +IP + VP +S P + P A N + P + + S
Sbjct: 342 LSSVAPLMQKSKSVPTSIPSV---VPA--NISSP-NPNPTLAPNPTGPSRVTSGTEDLLS 395
Query: 628 VPNMNVKETWSYTGTNTVXXXXXXXXXTIMNHPPTVIANYATQALHSSSIPIAPVKPPDN 687
+ T + T++ T + P V++ Q H+ P +P P++
Sbjct: 396 LDATPFSPTLAPQHTSSNATKHSAPPVT-KSAPFPVVS--PLQLNHTPGFPTSPAAKPNS 452
Query: 688 PIQGTDPPSS---TVLESDLFEKTKKKCDIPWLSKTVNNNIFSLDTNKISSRPFAEVGNL 744
P P SS T+ ++ + + + + +P + S + K++ AEV L
Sbjct: 453 PTSTFFPQSSFGQTIAKNTMDKPSAVRTSVPSQLAAPIPQVASAEQLKLA----AEVPKL 508
Query: 745 SEKLEELAAVKIKDECYFNI-DKSIKRED---KRQEIRKGYSEELRKVEEVARREET 797
+L ++ K D+ + D + D K EIRK Y EEL K ++++ ET
Sbjct: 509 ESQLSQVK--KSNDDLQKSSRDVAANLSDVKAKVSEIRKAYDEELAKAKQISLDIET 563
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 34.3 bits (75), Expect = 0.098
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 964 LERHALSHGGNKPFKC-----IVDGCERRFSTQILLERH 997
L+RH SH KPF C + GC R+FS + LL RH
Sbjct: 85 LKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 911 CLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALS 970
C WE C + + + H+ H CLW+ C + PS E H
Sbjct: 1002 CQWEGCLANLHSLENFIKHVLLLHHPKSCSVVK--CLWASCDMV-LPSEE---FEMHLRG 1055
Query: 971 HGGNKPFKCIVDGCERRFSTQILLERHVNN 1000
H N C V C++ FS + +H+ +
Sbjct: 1056 HLNNIRLNCEVSNCKKCFSNYEDMFKHLQH 1085
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 909 LLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYV 945
L C +CKK F N D+ H+Q++H+ + E+++
Sbjct: 1062 LNCEVSNCKKCFSNYEDMFKHLQHSHLPFKFTPESFI 1098
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 32.3 bits (70), Expect = 0.39
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 225 DGKQKNNELKNSVGP-STNGIVKIT--KLTSNESKRKLATTSSEPSKIRRAPATSAGQTK 281
+G +KNNE N V S I K + +L S+E + R++P T G T
Sbjct: 96 EGNEKNNEENNVVSSDSKEAITKESGAELESSEPASTNSNVGMTTRSGRQSPRTPIGSTT 155
Query: 282 KKQMHSKLEPKVNGIVSSTTSTRLDSSMN 310
K HS + TT+T S N
Sbjct: 156 PKSSHSPPSTRKRRGSVGTTATHTKRSKN 184
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.39
Identities = 65/335 (19%), Positives = 127/335 (37%), Gaps = 26/335 (7%)
Query: 549 NQQSPQILVNGTLLKLGNTMTSAYPNMNKPTSVTNTIPMLNKTVP----GLQTVSVPVHS 604
N +P + + T++ +TS+ +N TS+T++ +LN + P + S P+ S
Sbjct: 2347 NSSTP--ITSSTVVNTSTPITSSTA-LNTSTSITSS-SVLNSSTPITSSTVVNTSTPITS 2402
Query: 605 KPNYAVNFSHPVLMPQPGFIMTSVPNMNV-KETWSYTGTNTVXXXXXXXXXTIMNHPPTV 663
+N S P+ TS+ + +V + T ++ + T++N +
Sbjct: 2403 SS--VLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPI 2460
Query: 664 IANYATQALHSSSIPIAPVKPPDNPIQGTDPPSSTVLESD--LFEKTKKKCDIPWLSKTV 721
++ ++ +SS PI + T SS+VL S + T P S TV
Sbjct: 2461 TSS----SVLNSSTPITSSTALNT---STPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2513
Query: 722 NNNIFSLDTNKI--SSRPFAEVGNLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRK 779
N+ + ++ + SS P L+ ++ + + +
Sbjct: 2514 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTA 2573
Query: 780 GYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSID 839
S V T T TV+ + +TV+ ++ + S + + T I
Sbjct: 2574 LNSSTPITSSSVLN-SSTPITSSTVVNTSTPITSSTVVNSS---TPITSSTALNTSTPIT 2629
Query: 840 SPSDSQTSKECDEDSALSLSISLCSVDIQSQKSPI 874
S S +S +AL+ S S+ S + + +PI
Sbjct: 2630 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPI 2664
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.9 bits (69), Expect = 0.52
Identities = 24/117 (20%), Positives = 46/117 (39%)
Query: 236 SVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKLEPKVNG 295
SV + NG+++ T +S+ S +++SS PS TS + S +
Sbjct: 114 SVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173
Query: 296 IVSSTTSTRLDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRSNRKSSA 352
SS++S+ SS + + S++ S + + S+ SS+
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSS 230
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 1/121 (0%)
Query: 230 NNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKL 289
N L+ +V S+ + +S+ S TT++ PS + ++S+ + S
Sbjct: 120 NGVLQTTVSSSSVSSTTSSSSSSSPSSSS-TTTTTSPSSSSSSSSSSSSSSSSSSSSSSS 178
Query: 290 EPKVNGIVSSTTSTRLDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRSNRK 349
+ SS++S+ SS + + S+++ + +R S+
Sbjct: 179 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSS 238
Query: 350 S 350
S
Sbjct: 239 S 239
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.5 bits (68), Expect = 0.69
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 746 EKLEELAAVKIKDECYFNIDKSIKR--EDKRQEIRKGYSEELRKVEEVARREETIFTQIT 803
++LEE A + + NID IK+ E+K +E + +L+KV VA E +I+
Sbjct: 1622 KELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSANFDVKLKKV--VAETEFRSKAKIS 1679
Query: 804 VLKDVSSNVQN--TVIEANFCGSTTESESGIGTDKSIDSPSDSQ--TSK 848
V + + ++QN T +E + + TD+S S ++++ TSK
Sbjct: 1680 VYEKKTRDLQNKITQLEETIENLNKQLSNPEKTDESTSSVTETKPVTSK 1728
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 744 LSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSEELRKVEEVARRE 795
+ EK E A K +++ +++ KRE + Q R+ + R+ EE A+RE
Sbjct: 537 IQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKRE 588
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/169 (17%), Positives = 68/169 (40%), Gaps = 4/169 (2%)
Query: 743 NLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQI 802
N + EE A + +++ ++ KRE + + R+ + R+ EE A+RE +
Sbjct: 600 NAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKR 659
Query: 803 TVLKDVSSNVQNTVIEANFCGSTTESESGI--GTDKSIDSPSDSQTSKECDEDSALSLSI 860
++ + + E+E + T+++ ++ + +E D++ + S
Sbjct: 660 EAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSA 719
Query: 861 SLCS--VDIQSQKSPILKQPKTLRFPPKSHLSKPGGNNKRKSSTDTTST 907
L S ++ + K +P+ + L G + S+ + ST
Sbjct: 720 PLASSEANVDTSKQTNATEPEVVDKTKVEKLKASEGKSTSSLSSPSHST 768
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 31.1 bits (67), Expect = 0.91
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 800 TQITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPS--DSQTSKECDEDSALS 857
T I+V+K V++ + +EA E ++ +S P+ QT KE D DSA +
Sbjct: 62 TPISVIKSVTNKIDTNKLEAKDESKNVEKDATGNPQESKQEPNLEVQQTEKEKDVDSASA 121
Query: 858 LSISLCSVDIQSQKSPILKQPK 879
+ S+ S S++ Q K
Sbjct: 122 ENESINSSSSSSKECSTQTQSK 143
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 807 DVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSVD 866
D SSN ++ +++ S +ESES S S SDS +S ++ ++ + + + V
Sbjct: 271 DSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVS 330
Query: 867 IQSQKSPILKQPKT-LRFPPKSHLSKPGGNNKRKSSTDTTST 907
QS + + T ++ S + K + +TST
Sbjct: 331 AQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTST 372
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 1.2
Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 4/193 (2%)
Query: 671 ALHSSSIPIAPVKPPDNPIQGTDP-PSSTVLESDLFEKTKKKCDIPWLSKTVNNNIFSLD 729
A SS ++P K + + P PS ++ K K++ S++ ++ S
Sbjct: 41 AKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSS 100
Query: 730 TNKISSRPFAEVGNL---SEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSEELR 786
+ SS +E + S + EE VK +++ + + S E + +E EE +
Sbjct: 101 SESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKK 160
Query: 787 KVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQT 846
+ + E + + S + V+E SES ++ S DS S+S
Sbjct: 161 ESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGD 220
Query: 847 SKECDEDSALSLS 859
S + + S S
Sbjct: 221 SDSSSDSESESSS 233
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/139 (18%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 246 KITKLTSNESKRKLATTSSEPSKIRR-APATSAGQTKKKQMHSKLEPKVNGIVSSTTSTR 304
KITK + E ++ + T P K ++ A S+ + KK + + + K SS+ S
Sbjct: 31 KITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKE-ESSSESES 89
Query: 305 LDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRSNRKSSACIANSKNLTWSK 364
SS + S + S + + + +K S+ ++S + + +
Sbjct: 90 ESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEE 149
Query: 365 ANNLKQVQKQKCANSPQNS 383
+ +++++K ++S +S
Sbjct: 150 EEAVVKIEEKKESSSDSSS 168
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 1.6
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 700 LESDLFEKTKKKCDIPWLSKTVNNNIFSLDTNKISSRPFAEVGNLSEKLEELAA-VKIKD 758
LE+D+ + K K ++ L+ + ++ L K + A+V ++ L ++ K+
Sbjct: 1081 LEADVKQLPKLKKELESLND--KDQLYQLQATK-NKELEAKVKECLNNIKSLTKELENKE 1137
Query: 759 ECYFNIDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIE 818
E N+ + + + QEI + ++ +E ++ E + + LKDV +N Q +
Sbjct: 1138 EKCQNLSDASLKYIELQEIHENLLLKVSDLENYKKKYEGLQLDLEGLKDVDTNFQE--LS 1195
Query: 819 ANFCGSTTESESGIGTDKSIDSPSDSQTSKECD-EDSALSLSISLCSVDIQSQKSPILKQ 877
T ES + S +S+ D + SL+ + + ++ K P L++
Sbjct: 1196 KKHRDLTFNHESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELER 1255
Query: 878 PKTLRFPPKSHLSKPGGNNKRKS 900
T S L K + KRK+
Sbjct: 1256 KITNLMHEYSQLGKTFEDEKRKA 1278
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 157 SANGLLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNG 199
S+ L+ ++KK S S N ++S NS++ N +S+NG
Sbjct: 162 SSKNLVEDAHKSKKASTNSSINNMVSTVNSENSNVNNGSSLNG 204
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 2.1
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 15/148 (10%)
Query: 566 NTMTSAYPNMNKPTSVTNTI---PMLNKTVPGLQTVSVPVHSKPNYAVNFSHPVLMPQPG 622
+T TS+ P ++ TS T + P N T P TV S P N + +P
Sbjct: 378 STGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTS 437
Query: 623 FIMTSVP----NMNVKETWSYTG---TNTVXXXXXXXXXTIMNHPPTVIAN---YATQAL 672
+TS P N + YT T+T T + + T + + T
Sbjct: 438 TPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCT 497
Query: 673 HSSSIPI--APVKPPDNPIQGTDPPSST 698
S+S+P PV + I + P +ST
Sbjct: 498 TSTSVPYTSTPVTSSNYTISSSTPVTST 525
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 4/136 (2%)
Query: 565 GNTMTSAYPNMNKPTSVTNTIPMLN-KTVPGLQTVSVPVHSKPNYAVNFSHPVLMPQPGF 623
GN+ T P + PTS + + N T + S PV S P N + +P
Sbjct: 403 GNSTTPVTPTV-PPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTST 461
Query: 624 IMTSVPNMNVKETWSYTGTNTVXXXXXXXXXTIMNHPPTVIANYATQALHSSSIPIAPVK 683
+TS P T S T T N + Y + + SS+ I+
Sbjct: 462 PVTSTPLTTTNCTTS-TSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSST 520
Query: 684 P-PDNPIQGTDPPSST 698
P P+ T+ +ST
Sbjct: 521 PVTSTPVTTTNCTTST 536
Score = 28.3 bits (60), Expect = 6.4
Identities = 29/136 (21%), Positives = 45/136 (33%), Gaps = 8/136 (5%)
Query: 567 TMTSAYPNMNKPTSVTNTIPMLNKTVPGLQTVSVPVHSKPNYAVNFSHPVLMPQPGFIMT 626
T +++ P + P + T T + S PV S P N + +P +T
Sbjct: 428 TTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVT 487
Query: 627 SVP----NMNVKETWSYTGTNTVXXXXXXXXXTIMNHPPTVIANYATQALHSSSIPIAPV 682
S P N + YT T T + P N T S+S+
Sbjct: 488 STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTT----STSVLYTST 543
Query: 683 KPPDNPIQGTDPPSST 698
P+ T+ +ST
Sbjct: 544 PVTSTPLATTNCTTST 559
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 124 LEKYISYLSQTLSPKVLMDVEKQTEVASK---HPAHSANGLLNTKSEAKKPSCKSKTNGL 180
L + + + P +LM K+ AS + + S NG L S + PSC S+
Sbjct: 116 LSELNDFTKSLIQPSMLMCEPKEKPDASSINTNRSSSDNGFLTPSSSPRSPSC-SRVFNA 174
Query: 181 ISFGNSKHINEKVSTSMNGFVEMRHSVSDQFSK-EKLPGIL 220
+ + K + ++T +E +S + SK ++L +L
Sbjct: 175 VQLCSPKKSKDDITTPKKRLMEDTYSPRESPSKIQRLQDVL 215
>SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 392
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 872 SPILKQPKTLRFPPKSH--LSKPGGNNKRKSSTDTTSTVLLCL 912
SPI K P+ PPK H LS P G K V++CL
Sbjct: 83 SPIPKGPRRFLLPPKFHYRLSPPPGEFKSSPRVAIMVAVIVCL 125
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.5 bits (63), Expect = 2.8
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 771 EDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTESES 830
E++ E S E EE + EE+ ++ K V+++ +++ ++ E+ES
Sbjct: 39 EEESSEEESASSSESESSEEESESEESE-VEVPKKKAVAAS-EDSESDSESSEEEEETES 96
Query: 831 GIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSVDIQSQKSPILKQPKTLRFPPKSHLS 890
++ S +S S+S++ E +E+S S +S S LK+P+ P + L
Sbjct: 97 EEDSEVSDESESESESESESEEESE---SEEESDESERSGPSSFLKKPEKEEAKP-AGLK 152
Query: 891 KPGGNNKRKSSTDTTSTVLLCLWEDCKKEFENDPDLLDHIQNA 933
G + +SS + ++ +D K +E ++ I+NA
Sbjct: 153 FLRGESSEESSDEEEGRRVVKSAKD--KRYEEFISCMETIKNA 193
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.5 bits (63), Expect = 2.8
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 439 NIQQPCNGSVTTNNLASFVAVPQNMMLTTLR---IPPNGLTAPSIGQQNGISAFNRPNVN 495
NIQQP + S+ + + VP +L + +PPN + A + QQ+ P +
Sbjct: 85 NIQQPPSVSIASQPHYAEAIVPIQQVLQPQQYRQLPPNMVAATNAPQQH-------PQLQ 137
Query: 496 VQSPTKLNSQFVFPLMQNLNGTVVQLPNLMTKMPNFMLQQASQLAMQRQDHLQNQQSPQ 554
P ++Q P+ Q + LPN + LQQ Q Q+Q Q Q PQ
Sbjct: 138 RMMPILSSNQ---PIQQ------LPLPNQASPYIPVPLQQQQQSQPQQQPQQQQHQQPQ 187
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 777 IRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVI--EANFCGSTTESESGIGT 834
I K Y++ L K+ EV + I Q L+D SS ++ I + + G + + IG
Sbjct: 322 IEKNYTDLLDKMPEVVQLTYYIERQYVSLRDKSSYDESCFIIEQLLYIGLSQDMVDEIGR 381
Query: 835 DKSIDSPSDSQTSKECDEDSALSLSISL 862
K + S ++S ++ DS +SL I L
Sbjct: 382 RKLLKSLTNSLSTMAL-PDSLISLHIEL 408
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 829 ESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSVDIQ--SQKSPILKQPKTLRFPPK 886
++GI K + S S SQ++K E +++ + +Q S KSP+LK PK+ FP
Sbjct: 850 QNGIMKGK-LPSSSTSQSNKPFIEKASMHAPAKGRNSSMQEPSSKSPLLKTPKSNYFPGY 908
Query: 887 SHLS 890
LS
Sbjct: 909 GSLS 912
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.7 bits (61), Expect = 4.9
Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Query: 141 MDVEKQTEVASKHPAHSANGLLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGF 200
M T + SA+ + S + S ++ +I +S ++ +T+++
Sbjct: 1 MSFTNNTSSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSS 60
Query: 201 VEMRHSVSDQFSKEKLPGILNGLLDGK-QKNNELKNSVGPSTNGIVKITKLTSNESKRKL 259
S F+ + L+ Q+++ S+ S++ + + S S
Sbjct: 61 SSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSS 120
Query: 260 ATTSSEPSKIRRAPATSAGQTKKKQMHSKLEPKVNGIV--SSTTSTRLDSSMNGVT 313
SS S + A ++S+G + HS P + SS T++ L SS + V+
Sbjct: 121 HALSSSSSSLV-ASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVS 175
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 122 HDLEKYISYLSQTLSPKVLMDVEKQTEVASKHPAHSANGLLNTKSE 167
H L+KY++Y SQ S L D+ +T+ H + L++K E
Sbjct: 541 HQLKKYVTYFSQIWSTDELADI-SETKNLVGHDTKTNRSSLSSKHE 585
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 778 RKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKS 837
R+ + L V + + TI + +L+ S + + STT+S+ I + K+
Sbjct: 140 RRNSTSNLSSVSTNSDKSRTIGSNYNMLQSTKSTASQRRMSDSSTPSTTKSKEKIFSPKA 199
Query: 838 IDSPSDSQTSKECDE 852
+ SP+ +S E
Sbjct: 200 LSSPTQGASSNVTPE 214
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 499 PTKL-NSQFVFPLMQNLN----GTVVQLPNLMTKMPN---FMLQQASQLAMQRQDHLQNQ 550
P +L N+ V P +QN N + Q M P F+LQQ SQ+ QRQ Q
Sbjct: 107 PNRLANNPRVMPRLQNQNVPMQAGMQQFARNMKLTPQQRQFLLQQ-SQIQQQRQQQQQQS 165
Query: 551 QSPQ 554
Q PQ
Sbjct: 166 QQPQ 169
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 439 NIQQPCN--GSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSIGQQNGISAFNRPNVNV 496
N+QQ + GSVT + ++ P+ + R P+ AP++G +S +R +
Sbjct: 4 NVQQQVDSVGSVTEKLQKTNISRPRKYIPPFARDKPSAGAAPAVGDDESVS--SRGSSRS 61
Query: 497 QSPTKLNSQF 506
Q+P++ +S +
Sbjct: 62 QTPSEFSSNY 71
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 28.7 bits (61), Expect = 4.9
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 92 MKPQNGLKRDASVLANDDTKKKCLPKNGVTHDLEKYISYLSQTLSPKVLMDVEKQTEVAS 151
++ Q +K D ++ ++T + G D+E I +S ++ +V VEK ++
Sbjct: 908 IRTQFDVKIDIGDVSTEETTPVSV--RGAKADVENAIKEIS-AIAEEVKNLVEKVIKIDR 964
Query: 152 KHPAH--SANG--LLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGFVEM 203
++ + NG L NT E + K++T LISF N E+ S + G E+
Sbjct: 965 EYHRYLIGPNGSKLQNTIKECGGSTDKTETARLISFSNGNSEEERNSVVLRGDKEI 1020
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 87 YFNHKMKPQNGLKRDASVLANDDTKKKCLPKNGVTHDLEKYISYLSQTLSPKVLMDVEKQ 146
Y + P +GL D + K + + K +D+ K+ Y+ QTL ++ VE+
Sbjct: 304 YDETEFLPLSGLLPDMNCSTQQYVKLQVIYKEKSENDILKFKKYVQQTLK-RLNRSVEEI 362
Query: 147 TEVASKH 153
T++ KH
Sbjct: 363 TDLEIKH 369
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 28.3 bits (60), Expect = 6.4
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 190 NEKVSTSMNGF-VEMR----HSVSDQFSKE-KLPGILNGLLDGKQKNNELKNSVGPSTNG 243
N KV+ NG ++R HS S + G L G + + L +SV P ++
Sbjct: 67 NGKVAVQSNGVSTKLRMAKYHSKYSALSSVFRYAGRLCGTFEEDLVDKSLDSSVSPVSSK 126
Query: 244 IVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKLE 290
VK+ K + ES ++ E SK ++ + KKK KL+
Sbjct: 127 KVKVRKTSGKESSKR------EKSKKKKEKKEKKDKLKKKSKRLKLD 167
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 162 LNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGFVEMRHSVSDQFSKEKLPGILN 221
LNT +E P+ + N IS NS I +K + + E + + + E +L+
Sbjct: 65 LNTNTENNLPNIVNFQN--ISSANSGEIKQKDNEILFSSTEDINQHKENYQDENKIDLLD 122
Query: 222 GLLDGKQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRA 272
L K+ V PS+ ++ + SNE AT SSE S ++ A
Sbjct: 123 VALANP------KDCVVPSSGLLMPKEEFISNEEVGIPATNSSEKSNVKIA 167
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 228 QKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHS 287
+K ++ K S G + + K+ K+T + K SK R++ ++ + KKK++
Sbjct: 174 KKKSKKKTSTGSALDP-KKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKL 232
Query: 288 KLEPKVNGIVSSTTSTRLDSSMN 310
K +P+ V +S++
Sbjct: 233 KDKPESTSSVEKVKEGNRPASIH 255
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 28.3 bits (60), Expect = 6.4
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 9/158 (5%)
Query: 152 KHPAHSANGLLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGFVEMRHSVSDQF 211
+HP ++ NG + P +S N S S F E + S Q
Sbjct: 366 RHPLNATNGTSQSNISTPLPEPTPGQPRKVSGHNPPSARRLPSASSVKFNEKLKNASKQS 425
Query: 212 SKEKLPGILNGLLDGKQKNNELKNSVGPSTN--GIVKITKLTSNESKR----KLATTSSE 265
+ + + D + +N++ +VG T +V++ + +S + + T+S
Sbjct: 426 IQNENKASYSSYEDSEIQNDDETRTVGTPTETISVVRLRRSSSQSNIEPNGVRSPTSSPT 485
Query: 266 PSKIRRAPATSAGQTKKKQMHSKLEPKVNGIVSSTTST 303
S IRR TS + HSK + + +SS +T
Sbjct: 486 GSPIRR---TSGNRWSSGSSHSKKSAQRSVSMSSLNNT 520
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 606 PNYAVNFSHPVLMPQPGFIMTSVPNMNVKETWSYTGTNTVXXXXXXXXXTIMNHPPT-VI 664
P Y +++ + TS N E + YTG+ ++ TI T +
Sbjct: 41 PQYITIYTNGPVPGTTTIYPTSNVASNTSENYPYTGSKSLSSSSILSNSTISTSSSTPIT 100
Query: 665 ANYATQALHSSSIPIAPVKPPDNPIQGTDPPSSTVLES 702
A+ T + S+ I P P + P SS++L +
Sbjct: 101 ASVPTSSSILSNSTIPTTSPV--PTTSSTPTSSSILSN 136
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 27.9 bits (59), Expect = 8.5
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 567 TMTSAYPNMNKPTSVTNTIPMLNKTVPGLQTVSVPVH----SKPNYAVNFSHPVLMPQPG 622
T++ +Y N +K + I + N P T S +H S ++ V+ S P
Sbjct: 118 TVSHSYTNSSKDEKFLDPIALQNLFSPASDTHSQNIHDEALSPSSFRVSRSRYFPRPHRS 177
Query: 623 FIMTSVPNMNVKETWSYTGTNTVXXXXXXXXXTIMNHPPTVIANYATQALHSSSIPIAPV 682
SV N + T ++T+ I + PT ++ +SS P + +
Sbjct: 178 SKNLSVSNRLQLAVFKETTSSTLSHGNSVEADEINSFNPTPFSSSPLHFTNSSPNPNSDI 237
Query: 683 KPPDNPI 689
PD +
Sbjct: 238 VTPDKQL 244
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 769 KREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNT-VIEANFCGSTTE 827
+R ++ +E+ + +K EE+ + + T+ + SSNV+++ +EA + T E
Sbjct: 523 RRRNEEEELARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEAIY---TKE 579
Query: 828 SESGIGTDKSIDSPSD-SQTSKECDEDSALSLSISLCSVDIQS-QKSPILKQPKT--LRF 883
+S + + + S + ++ D + LS S I Q SP+ K L+
Sbjct: 580 PQSITNSPEGLHSNQETTEIDPSSPRDDSTPLSWRSHSHPIPPVQVSPLFTSDKNDPLQL 639
Query: 884 PPKSHLSKPGGNNKRKSSTD 903
P+S S + + S D
Sbjct: 640 NPQSDDSTSSPKHGKSRSID 659
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,853,703
Number of Sequences: 5004
Number of extensions: 202908
Number of successful extensions: 690
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 593
Number of HSP's gapped (non-prelim): 113
length of query: 1130
length of database: 2,362,478
effective HSP length: 80
effective length of query: 1050
effective length of database: 1,962,158
effective search space: 2060265900
effective search space used: 2060265900
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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