Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000848-TA|BGIBMGA000848-PA|IPR007087|Zinc finger,
C2H2-type
(1130 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 53 2e-06
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 51 5e-06
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 43 0.002
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 42 0.004
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 40 0.015
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 39 0.026
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 37 0.11
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 36 0.18
12_01_0921 - 9102983-9103360,9104505-9104606,9104709-9104801,910... 34 0.74
08_02_1244 - 25537090-25537467,25538612-25538713,25538816-255389... 34 0.74
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 34 0.74
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 34 0.74
08_02_1079 + 24190453-24190483,24191201-24191475,24191619-241919... 33 0.98
08_02_0985 + 23299996-23300208,23300355-23300520,23300790-233010... 33 0.98
11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495 33 1.3
06_03_1360 + 29558789-29559020,29559203-29559378,29560285-295603... 33 1.7
03_02_0077 - 5463347-5463445,5463557-5463622,5463736-5463801,546... 33 1.7
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 33 1.7
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 32 2.3
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 32 2.3
07_03_0146 + 14389350-14390372 32 3.0
05_05_0267 - 23704249-23704401,23704476-23704780,23704967-237056... 31 5.2
05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363... 31 5.2
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 31 5.2
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521... 31 6.9
05_07_0043 - 27284814-27285190,27285287-27285488,27285576-272856... 31 6.9
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 31 6.9
04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548... 31 6.9
03_02_0823 - 11538677-11539324 31 6.9
02_05_0760 + 31548272-31548508,31548746-31548787,31548837-31550006 31 6.9
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 31 6.9
08_02_1242 - 25513665-25513997,25514184-25514257,25514317-255144... 30 9.2
05_01_0488 - 4070506-4072277,4072455-4072557 30 9.2
03_06_0445 - 33982018-33982965,33984308-33984463 30 9.2
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 30 9.2
01_01_0763 + 5898719-5899021,5899124-5899518,5899619-5899703,589... 30 9.2
>05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 52.8 bits (121), Expect = 2e-06
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 904 TTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLW 963
TT + LC +E+C K F + L H AHV + Y+C C GK
Sbjct: 82 TTEILFLCSYENCGKTFVDVAALRKH---AHVHNE---RQYICQEPGC---GKKFVDSSK 132
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L+RH L H G K F C GC + FS L H+ H
Sbjct: 133 LKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTH 170
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHAL 969
+C C K+F + L H H+ G+++++C C GK L H
Sbjct: 117 ICQEPGCGKKFVDSSKLKRH----HL-IHTGQKDFICPHPGC---GKAFSLDFNLRSHLK 168
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
+H C C +RF++ L+ HV H
Sbjct: 169 THALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
>02_04_0194 + 20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 51.2 bits (117), Expect = 5e-06
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 904 TTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLW 963
TT + LC +E C K F + L H AHV G YVC ++ C + S
Sbjct: 38 TTEVLFLCSYEGCGKTFVDAGALRKH---AHVH---GERQYVCHYAGCDKKFLDSSK--- 88
Query: 964 LERHALSHGGNKPFKCIVDGCER--RFSTQILLERHVNNH 1001
L+RH L H G K F C +GC + FS L+ H+ H
Sbjct: 89 LKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTH 128
Score = 30.3 bits (65), Expect = 9.2
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLW--LERH 967
+C + C K+F + L H G +N+VC C GK L L+ H
Sbjct: 73 VCHYAGCDKKFLDSSKL-----KRHFLIHTGEKNFVCPHEGC---GKVLAFSLDFNLKAH 124
Query: 968 ALSHGGNKPFKCIVDGCERRFSTQILLERHV 998
+H + C C RRF+ + L H+
Sbjct: 125 MKTHSVDNYHVCKYPECARRFTQESKLRAHI 155
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 42.7 bits (96), Expect = 0.002
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 914 EDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGG 973
++C F+ L H+Q+ + +++C C + L RH L H G
Sbjct: 63 QECGASFQKPAHLKQHMQS-----HSDERSFICPLEDCPFS---YIRKDHLNRHMLKHQG 114
Query: 974 NKPFKCIVDGCERRFSTQILLERHV 998
K F C +DGC R+FS + ++RHV
Sbjct: 115 -KLFTCSMDGCGRKFSIKANMQRHV 138
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 909 LLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHA 968
++C C K F N L H Q H YV QC + G+ + ++RH
Sbjct: 186 VVCCEPGCMKTFTNVECLRAHNQACH--------QYV----QCDICGEKHLKKN-IKRHL 232
Query: 969 LSHG---GNKPFKCIVDGCERRFSTQILLERHV 998
+H + KC +GCE FS + L +H+
Sbjct: 233 RAHEEVPSTERIKCSFEGCECSFSNKSNLTKHI 265
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 41.5 bits (93), Expect = 0.004
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 920 FENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKC 979
F+ D + D E +A + N +C C GK S +L+RH H +PFKC
Sbjct: 794 FQCDIEFCDMTFETKAELRAHQRN-ICTDESC---GKRFSSHKYLKRHQCVHRDERPFKC 849
Query: 980 IVDGCERRFSTQILLERHVNNH 1001
DGC F H+ H
Sbjct: 850 PWDGCPMTFKWLWAQTEHIRVH 871
Score = 34.7 bits (76), Expect = 0.43
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLE-RHA 968
+C E C K F + L H Q H + + + C W C + K LW + H
Sbjct: 818 ICTDESCGKRFSSHKYLKRH-QCVHRDERP----FKCPWDGCPMTFK----WLWAQTEHI 868
Query: 969 LSHGGNKPFKCIVDGCERRFSTQILLERHVN--NHF 1002
H G +P+KC C + F RH NH+
Sbjct: 869 RVHTGERPYKCSAPDCGQSFRYVSDYSRHRKKFNHY 904
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 39.5 bits (88), Expect = 0.015
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 16/164 (9%)
Query: 839 DSPSDSQTSKECDEDSALSLSISLCSVDIQSQKSPIL-----KQPKTLRFPPKSHLSKPG 893
D S+ + C+ ++ ++S+ + DI+ + K+ + RF + +
Sbjct: 491 DDKVASERTGPCESVTSTAVSVEIKIADIKRELEDNSTASKGKKKRAKRFQCEIDYCRMT 550
Query: 894 GNNKRKSSTDTTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKV 953
N+ + S +T C + C + F + L H Q+ H + Y C W C +
Sbjct: 551 FKNRAELSVHKKNT---CTVKSCGRHFRSHKYLRRH-QSIHNDDMP----YKCPWEGCSM 602
Query: 954 RGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQILLERH 997
K S R H H G +P+KC GC + + RH
Sbjct: 603 AFKWSWDR---GEHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRH 643
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 38.7 bits (86), Expect = 0.026
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 951 CKVRGKP-SCSRL-WLERHALSHGGNKPFKCIVDGCERRFSTQILLERHV 998
C V G P S SR L RH L+H G K F C ++GC R+F+ + ++RHV
Sbjct: 289 CHVDGCPFSYSRKDHLNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRHV 337
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 975 KPFKCIVDGCERRFSTQILLERHVNNH 1001
+PF C VDGC +S + L RH+ H
Sbjct: 285 RPFSCHVDGCPFSYSRKDHLNRHLLTH 311
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHAL 969
+C + CKK+F LL H + H++ + + C W CK K +R H
Sbjct: 1254 ICPVKGCKKKFFCHKYLLQH-RKVHIDERPLK----CTWKGCKKAFKWPWART---EHMR 1305
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERH 997
H G +P++C GC + F RH
Sbjct: 1306 VHTGVRPYECQEPGCGQTFRFVSDFSRH 1333
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 35.9 bits (79), Expect = 0.18
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 731 NKISSRPFAEVGNLSEKLEELAAVKIKDECYFN-IDKSIKREDKRQEI-RKGYSEELRKV 788
N +S + + NLS ++ + ++ EC N ++ S+KR + ++ K Y+EE+R +
Sbjct: 240 NDLSRKTETLIANLSHQITAKSKYLVELECRCNQMNLSVKRAMEETDLLHKSYNEEMRNM 299
Query: 789 EEVAR-REETIFTQITVLKDVSSNVQNTV 816
+ AR + IF + L+ + +N +
Sbjct: 300 QSAAREHSQKIFEETDQLRKQLDDKENAI 328
>12_01_0921 -
9102983-9103360,9104505-9104606,9104709-9104801,
9104875-9105087,9105172-9105412,9105501-9105859,
9106006-9106218
Length = 532
Score = 33.9 bits (74), Expect = 0.74
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 805 LKDVSSNVQNTVIE---ANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSIS 861
+KD+++ +++ + + S T+ G G+D S P D + +CD+DS L
Sbjct: 6 IKDIAATIKHIETQHASSKTKNSGTKKSHGEGSDTSEFLPEDDEQGVQCDDDSYLEAEQP 65
Query: 862 L-CSVDIQSQ---KSPILKQPKTLRFPPKSHLSK 891
+ ++ Q K K+ TL+ PP +SK
Sbjct: 66 VPIMIEYPRQTRRKKCATKKKPTLKMPPGVRISK 99
>08_02_1244 -
25537090-25537467,25538612-25538713,25538816-25538908,
25538982-25539194,25539279-25539532,25539801-25539966,
25540114-25540326
Length = 472
Score = 33.9 bits (74), Expect = 0.74
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 805 LKDVSSNVQNTVIE---ANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALS---- 857
+KD+++ +++ + + S T+ G G+D S P D + +CD+DS L
Sbjct: 6 IKDIAATIKHIETQHASSKTKNSGTKKSHGEGSDTSEFLPEDDEQGVQCDDDSYLEPEQP 65
Query: 858 LSISLCSVDIQSQKSPILKQPKTLRFPPKSHLSK 891
+ I + +K K+ TL+ PP +SK
Sbjct: 66 IPIMIEYPRQTRRKKCATKKKPTLKMPPGVRISK 99
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 33.9 bits (74), Expect = 0.74
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 767 SIKREDKRQEIRKGYSEELRKVEE--VARREETIFTQITVLKDVSSNVQNTVIEANFCGS 824
S+ ED+R I K YS L +E +R ++ ++ L+D+ + NT I + S
Sbjct: 294 SMTDEDRRSSISKDYSPPLETQQEHNACKRLPSVVAKLMGLEDLPEHKDNTAISSQVSKS 353
Query: 825 TTE--SESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSVDIQSQKSPILKQPKTLR 882
TE E + S+ S +++ ++ + D+ + ++ + + +P KQ + +
Sbjct: 354 VTERSEEPTMLRPLSLSSQNEATPRQQRNLDATIK---NVPNSKFPVETAP-WKQQEKIV 409
Query: 883 FPPKSHLSKPGGNNKRKSSTDTTSTV 908
P K G + K + + S +
Sbjct: 410 LPRKLPKGSKGAHGKEQHAASVYSEI 435
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 33.9 bits (74), Expect = 0.74
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHAL 969
+C + C K+F + LL H + H + + C W C + K +R H
Sbjct: 1110 ICPVKGCGKKFFSHKYLLQH-RKVHTDDRP----LTCPWKGCNMAFKWPWART---EHLR 1161
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERH 997
H G++P+ C GC + F RH
Sbjct: 1162 VHTGDRPYVCHEPGCAQTFRFVSDFSRH 1189
>08_02_1079 +
24190453-24190483,24191201-24191475,24191619-24191977,
24192066-24192306,24192391-24192603,24192677-24192769,
24192872-24192973,24194104-24194481
Length = 563
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 805 LKDVSSNVQNTVIE---ANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALS---- 857
+KD+++ +++ + + S T+ G G+D S P D + +CD+DS L
Sbjct: 37 IKDIAATIKHIETQHASSKTKNSGTKKSHGEGSDTSEFLPEDDEQGVQCDDDSYLEPEQP 96
Query: 858 LSISLCSVDIQSQKSPILKQPKTLRFPPKSHLSK 891
+ I + +K K+ TL+ PP +SK
Sbjct: 97 VPIMIEYPRQTRRKKCATKKKPTLKMPPGVRISK 130
>08_02_0985 +
23299996-23300208,23300355-23300520,23300790-23301043,
23301128-23301340,23301414-23301506,23301609-23301710,
23302852-23303229
Length = 472
Score = 33.5 bits (73), Expect = 0.98
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 805 LKDVSSNVQNTVIE---ANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALS---- 857
+KD+++ +++ + + S T+ G G+D S P D + +CD+DS L
Sbjct: 6 IKDIAATIKHIETQHASSKTKNSGTKKSHGEGSDTSEFLPEDDEQGVQCDDDSYLEPEQP 65
Query: 858 LSISLCSVDIQSQKSPILKQPKTLRFPPKSHLSK 891
+ I + +K K+ TL+ PP +SK
Sbjct: 66 VPIMIEYPRQTRRKKCATKKKPTLKMPPGVRISK 99
>11_08_0010 + 27605105-27607919,27607954-27608013,27608110-27608495
Length = 1086
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 715 PWLSKTVNNNIFSLDTNKISSRPF-AEVGNLS 745
PWL K N NI SL NK+ + P A +GNL+
Sbjct: 314 PWLGKLTNLNIVSLGGNKLDAGPIPAALGNLT 345
>06_03_1360 +
29558789-29559020,29559203-29559378,29560285-29560346,
29560426-29561212,29561516-29562244
Length = 661
Score = 32.7 bits (71), Expect = 1.7
Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 459 VPQNMMLTTLRIPPNGLTAPSIGQ--QNGISAFNRPNVNVQSPTKLNSQFVFPLMQNLNG 516
VPQN + T + I Q QN + A +V Q PT++ Q V + N
Sbjct: 306 VPQNQLPTQIPQSVQNQLPTQIPQSVQNQLPAQIPQSVQNQLPTQI-PQSVQNRLSTQNP 364
Query: 517 TVVQLPNLMTKMPNFMLQQASQLAMQRQDHLQNQQSPQILVNGTLLKLGNTMTSAYPNMN 576
Q +P+ QQ +Q Q H Q PQ N +++ + N+
Sbjct: 365 QSTQTLQTTQNLPSIQTQQLTQPQFYNQTHFPQNQIPQTQANIPQMQIPHIQIPQLSNIT 424
Query: 577 K 577
K
Sbjct: 425 K 425
>03_02_0077 -
5463347-5463445,5463557-5463622,5463736-5463801,
5463886-5464182,5464268-5464714
Length = 324
Score = 32.7 bits (71), Expect = 1.7
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 789 EEVARREETIFTQITVLKDVSSNVQNTVIEANFCG-STTESESGIGTDKSIDSPSDSQTS 847
+ VAR++ V K + N Q+ + C S+ + ES G D + S T+
Sbjct: 136 DNVARKKARSTAATVVQKKGNKNAQSKKAQKGACSRSSNQKESNGGGDGG--NVQSSSTN 193
Query: 848 KECDEDSALSLSISLCSVDIQSQKSPILKQPKT 880
D+DS LSL ++ CS + K L P T
Sbjct: 194 YLSDDDS-LSLEMTSCSNVSSASKKSSLSSPAT 225
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 32.7 bits (71), Expect = 1.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 229 KNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKI-RRAPATSAGQTKKKQMHS 287
K+ ++ PS NG + K S +SK++ A+ + P K+ + +P T M S
Sbjct: 238 KDTRKTSASSPSQNGSAVVKKQMSKDSKKESASEKNSPPKLYKTSPPTPTPTPPPPAMTS 297
Query: 288 ----KLEPKVNGIVSSTTST 303
L K NG + TST
Sbjct: 298 PPKLNLAAKPNGTSGTVTST 317
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 32.3 bits (70), Expect = 2.3
Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 665 ANYATQALHSSSIPIAPVKPPDNPIQGTDPPSSTVLESDLFEKTKKKCDIPWLSKTVNNN 724
A A++ L++S +P +P +PP P S +L F+ + I LS+ + +
Sbjct: 40 AREASKHLYASLVPFSPAQPP---------PLSNLLAGPAFDAEQIWSQIELLSRPLIPH 90
Query: 725 IFSLDTNKISSRPFAEVGNLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSEE 784
+ ++ +P ++ +E A K ++E D+ ++ D + + EE
Sbjct: 91 L-RRQLRRLEQQPPSQPPPRTESKSADAEEKSEEEEDGEGDEELEELDDVDDEEESEEEE 149
Query: 785 LRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDS 844
++ + + +KD+ + EA + G + + T+ ++ SDS
Sbjct: 150 KEELGLEGEAGNEVEDEFFKIKDLDKFMVKGE-EAEYGGGAKQGKKKKKTENWMEEDSDS 208
Query: 845 QTSKECDED 853
+ + DED
Sbjct: 209 EDEEYLDED 217
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 227 KQKNNELKNSVGPSTNGIVKITKLTSN---ESKRKLATTSSEPSKIRRAPATSAGQTKK- 282
+Q EL+ +G T + + K E + KLA ++E SK+ + + SA KK
Sbjct: 1731 RQYAAELEKQIGALTQQLQLVEKQYEQKVTEEREKLALVNTEVSKLTQKLSKSAEMEKKI 1790
Query: 283 KQMHSKLEPKVNGIVSSTTSTRLDSS 308
+ + KL+ K + + S++ LDSS
Sbjct: 1791 EHLEQKLQAK-DSVESTSRDFSLDSS 1815
>07_03_0146 + 14389350-14390372
Length = 340
Score = 31.9 bits (69), Expect = 3.0
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Query: 565 GNTMTSAYPNMNKPTSVTNTIPMLNKTVPGL--QTVSVPVHSKPNYA-VNFSHPVLMPQP 621
G +T++Y PT T+ +TVP + QTV P P+ A V S L P
Sbjct: 107 GTGLTTSYAGQTVPTMADQTVYYAGQTVPTIAGQTVIYPGQIAPHVAGVTGS---LEISP 163
Query: 622 GF-IMTSVPNMNVKETWSYTGTNTVXXXXXXXXXTIMNH-PPTVIANYATQALHSSSIPI 679
GF MTS + N + T ++T + + P T Y A + PI
Sbjct: 164 GFHTMTSSIDFNYYSSPVNTVSHTTPHIPNAYNDSNRRYSPDTRYGQYNNIAPQTQ--PI 221
Query: 680 APVKPPDNP 688
P PP +P
Sbjct: 222 RPPSPPPDP 230
>05_05_0267 -
23704249-23704401,23704476-23704780,23704967-23705674,
23707772-23708114,23708300-23708374,23708625-23708675,
23708747-23708818,23708903-23709042,23709227-23709280,
23709446-23709553,23709769-23709864,23709946-23710005,
23710352-23710411,23711699-23711927
Length = 817
Score = 31.1 bits (67), Expect = 5.2
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Query: 226 GKQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQM 285
G++K + S +S+ K+K TTS + +I + TKKKQ
Sbjct: 4 GEEKEERKRGSKSQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLANTKKKQE 63
Query: 286 HSKL----EPKVNGIVSSTTSTRLDSSMNGVTCG 315
K+ + V G++ + + G G
Sbjct: 64 EGKIKRNKKAPVQGVIQKDKECKSSKEIEGKNIG 97
>05_01_0458 +
3630218-3630274,3630383-3630507,3630635-3630710,
3630884-3630985,3631075-3631290,3632217-3632297,
3633152-3633235,3633405-3633509,3634338-3634516,
3634681-3634765,3634889-3635090,3635165-3635234,
3635353-3635422,3635745-3635834,3636020-3636088,
3636520-3636618,3636804-3636914
Length = 606
Score = 31.1 bits (67), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 909 LLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQ-CKV 953
L ++ K F+ D + D Q A V Q G E Y W++ C++
Sbjct: 218 LQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWNKICEI 263
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 31.1 bits (67), Expect = 5.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 914 EDCKKEFENDPDLLDHIQNAHVETQAG 940
+DC+KEFEN+ DLL I++ ++ + G
Sbjct: 237 QDCEKEFENELDLLGSIRHLNIVSLLG 263
>11_06_0346 -
22549699-22549721,22549857-22549999,22550100-22552175,
22552305-22552822
Length = 919
Score = 30.7 bits (66), Expect = 6.9
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 694 PPSSTVLESDLFEKTKK---KCDIPWLS--KTVNNNIFSLDTNKISSRPFAEVGNLS--E 746
P + V+E + F++ ++ C +PWL+ + + L N + + P +E+ S
Sbjct: 792 PENPIVIEKEGFKELERFSLDCPVPWLTFEEEAMPKLTYLRLN-LHASPASEMSVPSGIN 850
Query: 747 KLEELAAVKIKDECYFNIDKSIKRE-DKRQEIRKGYSEELRKVEEVARREETIFTQITVL 805
L+EL V + CY NI K + R DK++E G + + A E T+ T I V
Sbjct: 851 NLKELTEVTL---CY-NIRKDVIRSSDKKEESATGSEVDAAEDGAQAADEATLRTTIQVQ 906
Query: 806 KDV 808
++
Sbjct: 907 SEI 909
>05_07_0043 -
27284814-27285190,27285287-27285488,27285576-27285650,
27285743-27285816,27285909-27285996,27286081-27286203,
27288374-27288580,27288631-27288636
Length = 383
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 674 SSSIPIAPVKPPDNPIQGTDPPSSTVLESDLFEKTKKKCDIPWLSKTVNNNIFSLDTNKI 733
SSS + K P N G PP S +L S TKK DI T + LDT +
Sbjct: 213 SSSKSHSTKKVPRNSTPGVQPPKSEILHSKTIRATKKTEDI----NTPSPGHKGLDTVGL 268
Query: 734 SSRPFAEVGNLSEKLE 749
R N S LE
Sbjct: 269 PIRKLFPSSNSSTLLE 284
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 30.7 bits (66), Expect = 6.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 915 DCKKEFENDPDLLDHIQNAHVETQAG 940
DC+KEFEN+ DLL I++ ++ + G
Sbjct: 266 DCEKEFENELDLLGRIRHPNIVSLLG 291
>04_04_1159 -
31352922-31353098,31354117-31354267,31354581-31354812,
31354902-31355112,31355791-31355909,31355994-31356176,
31356283-31356481,31356636-31357015,31357127-31357191,
31357925-31357990,31358427-31358501,31358781-31358852,
31359318-31359386,31359476-31359547,31359658-31359729,
31360126-31360230,31360282-31360353,31361053-31361230,
31361707-31361791
Length = 860
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 445 NGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSIGQQNG 485
NG+ NN F A + + T R+ P+ L IG QNG
Sbjct: 365 NGTTIINNARQFQATLDSELFQTARMSPSSLRYYGIGLQNG 405
>03_02_0823 - 11538677-11539324
Length = 215
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 7 CGVAVLSPTESGGCSGSDITEPRSPRSPESACSTAEEGAG 46
CGVAV +PT + + + + R+ SP + C G G
Sbjct: 58 CGVAVAAPTPAVSSENAVVLKTRASLSPSARCRLGPAGGG 97
>02_05_0760 + 31548272-31548508,31548746-31548787,31548837-31550006
Length = 482
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 876 KQPKTLRFPPKSHLSKPGGNNKRKSSTDTTSTVLLCLWE 914
K+P+T+ P K+ SKP + S TDT+S L +W+
Sbjct: 443 KKPRTV--PSKNSASKPDVESANNSGTDTSSKPNLSVWQ 479
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 789 EEVARREETIFTQITVLKDVSSNVQNTVIEAN 820
EE ARR++ + Q T LK+ SS +QN + + N
Sbjct: 766 EERARRDQEVENQRTKLKEASSTIQNLLDQLN 797
>08_02_1242 -
25513665-25513997,25514184-25514257,25514317-25514422,
25514507-25514557,25514629-25514700,25514785-25514924,
25515109-25515162,25515328-25515435,25515652-25515747,
25515828-25515887,25516234-25516293,25517581-25517809
Length = 460
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Query: 226 GKQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQM 285
G++K + S +S+ K+K TTS + +I + TKKKQ
Sbjct: 4 GEEKEERKRGSKSQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLENTKKKQE 63
Query: 286 HSKL----EPKVNGIVSSTTSTRLDSSMNGVTCG 315
K+ + V G++ + + G G
Sbjct: 64 EGKIKRNKKAPVQGVIQKDKECKSSKEIEGKNIG 97
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 723 NNIFSLDTNKISSRPFAEVGNLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYS 782
N+IF + KI E+ + KL+ ++ C F + + +++Q++ +
Sbjct: 172 NSIFYALSQKIIELE-DELHEVRGKLDASEEKNMRCHCNFGANSELSEHEEKQQVSDVET 230
Query: 783 EELRK-VEEVARREETIFTQITVLKDVSSNVQNTVIEA 819
L+K ++EV +E + + V KD ++ +++ A
Sbjct: 231 SSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSA 268
>03_06_0445 - 33982018-33982965,33984308-33984463
Length = 367
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 245 VKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMHSKLEPKVNGIVSSTTSTR 304
+K+ K+T+N+SK + P + R P TKK PK+ +V TR
Sbjct: 139 IKVEKITNNDSKNQQVKVERAPKEATRTP-----DTKKPSSVPNGPPKLTSLVKCNDPTR 193
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 30.3 bits (65), Expect = 9.2
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 703 DLFEKTKK-KCDIPWLSKTVNNNIFSLDTNKISSRPFAEVGNLSEKLEELAAVKIKDECY 761
+L E T+K K +I + K ++N L K ++ E+ LSEK+++L+ IK+
Sbjct: 262 ELDESTEKLKSEIQEMDKNISN----LAAEK-EAKLGGEMKTLSEKVDKLSHALIKETSV 316
Query: 762 F-NIDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEAN 820
N +++IK E+ KG + L+ +E++ R +I + T +K+ + A+
Sbjct: 317 MNNQEETIKSEE------KGAEKILKNIEDIKR---SIIERDTAVKNAEDGAADMKKRAD 367
Query: 821 FCGSTTESESGIGTDKSIDSPSDSQTSKECDED 853
T E + + + + + K+C ED
Sbjct: 368 --DLTKELDESEKEYQGVLAGKSNANEKKCLED 398
>01_01_0763 +
5898719-5899021,5899124-5899518,5899619-5899703,
5899810-5900032,5900131-5900327,5900531-5900601,
5904034-5904218,5905914-5906068,5906241-5907632,
5907973-5908269
Length = 1100
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 744 LSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSE 783
L EKL +L + E F++D +R D +QEI GYS+
Sbjct: 691 LFEKLADLQQARATMELLFSVDWYKERIDGKQEIMIGYSD 730
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,888,292
Number of Sequences: 37544
Number of extensions: 1193662
Number of successful extensions: 2909
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2866
Number of HSP's gapped (non-prelim): 62
length of query: 1130
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1040
effective length of database: 11,414,388
effective search space: 11870963520
effective search space used: 11870963520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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