Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000848-TA|BGIBMGA000848-PA|IPR007087|Zinc finger,
C2H2-type
(1130 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 44 2e-05
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 28 1.2
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 27 2.8
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 27 2.8
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 26 6.4
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 8.5
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 44.0 bits (99), Expect = 2e-05
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 916 CKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNK 975
CK+ PD + H +T G + Y C + C S S LE H L H K
Sbjct: 329 CKRCDSTFPDRYSY--KMHAKTHEGEKCYRCEY--CPYA---SISMRHLESHLLLHTDQK 381
Query: 976 PFKCIVDGCERRFSTQILLERHVNNHFN 1003
P+KC D C + F + LL+RH+N + N
Sbjct: 382 PYKC--DQCAQTFRQKQLLKRHMNYYHN 407
Score = 41.9 bits (94), Expect = 9e-05
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 919 EFENDPD-LLDHIQNAHVETQA-GRENYVCLWS--QCKVRGKPSCSRLWLERHALSHGGN 974
+FE DPD ++ Q +TQ G+ S C S L RH +H +
Sbjct: 94 DFE-DPDYIVQEEQEPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSED 152
Query: 975 KPFKCIVDGCERRFSTQILLERHVNNH 1001
+P KC+V CER F T L+ HVN H
Sbjct: 153 RPHKCVV--CERGFKTLASLQNHVNTH 177
Score = 31.9 bits (69), Expect = 0.098
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 934 HVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGNKPFKCIVDGCERRFSTQIL 993
H+ T G + + C C S + L RH H G KP+ C D C RF+
Sbjct: 230 HIRTHTGEKPFQC--PHCTYA---SPDKFKLTRHMRIHTGEKPYSC--DVCFARFTQSNS 282
Query: 994 LERHVNNH 1001
L+ H H
Sbjct: 283 LKAHKMIH 290
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L+RH +H G KPF+C C + L RH+ H
Sbjct: 227 LKRHIRTHTGEKPFQC--PHCTYASPDKFKLTRHMRIH 262
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHV 998
L+ H +H G KP +C C+ F+T L RH+
Sbjct: 170 LQNHVNTHTGTKPHRC--KHCDNCFTTSGELIRHI 202
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 198 NGFVEMRHSVSDQFSKEKLPGILNGLLDGKQKNNELKNSV 237
NG ++ HS S+Q K LN G +KN+ NSV
Sbjct: 1237 NGLLDAEHSKSEQLLKYNSARFLNVSQAGSRKNSADSNSV 1276
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 27.1 bits (57), Expect = 2.8
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 521 LPNLMTKMPNFMLQQASQLAMQRQDHLQNQ---QSPQILVNGTLLKLGNTMTSAYPNMNK 577
+P+L + N L Q Q+ +QRQ LQ Q Q+ LV+ L L + N
Sbjct: 7 IPSLDDEAENLRLLQQQQMVLQRQYLLQQQYHLQAQLNLVHQQQLALEQQSAAISTNTAA 66
Query: 578 PTSVTNTIPMLNKTVPGLQTVSVPVHSKPN 607
P + + P S+P + N
Sbjct: 67 PGTAGPNAATVTAATPQPPAASMPPSTTTN 96
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query: 806 KDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSV 865
+D ++ N G + E + D D S T + D SA + +
Sbjct: 756 EDTKADNMNNNHSDQLTGDNSADERAVPNDADDDDESTMTTLQATDAHSAPHALLFAANK 815
Query: 866 DIQSQKSPILKQPKTLRFPPKSHLSKPGGNNKRKSSTDTT 905
Q+S + + + PPK H S+ G +S + T
Sbjct: 816 SKIKQESLVQQSSRMFLEPPKHHASR--GAKPHRSRCEAT 853
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 681 PVKPPDNPIQGTDPPSSTVLESDLFEKTKKKCDIPWLSKTVNNNIFSLDTNKI 733
P PP++ +QG+ P+ V+E E+T + S + F + +K+
Sbjct: 61 PRSPPNDNVQGSVSPAVDVVEVMPEEQTSASMECQETSHPIKEQGFEVSASKL 113
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.4 bits (53), Expect = 8.5
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 471 PPNGLTAPSIGQQNGISAFNRPNVNVQSPTKLNSQFVFPLMQNLNGTVVQLPNLMTKMPN 530
P + +PS + +++ N N+ + + Q +QNLN + M P
Sbjct: 67 PSSSSASPS--SPSSVASPNSRASNMSPESSASDQSAAYTLQNLN--LSSSAGTMN-YPG 121
Query: 531 FMLQQASQLAMQRQDHLQNQQSPQ 554
QQ Q Q+Q H Q+QQ Q
Sbjct: 122 MGYQQQQQQQQQQQQHHQHQQLQQ 145
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,062,431
Number of Sequences: 2123
Number of extensions: 41180
Number of successful extensions: 64
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 10
length of query: 1130
length of database: 516,269
effective HSP length: 71
effective length of query: 1059
effective length of database: 365,536
effective search space: 387102624
effective search space used: 387102624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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