Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000848-TA|BGIBMGA000848-PA|IPR007087|Zinc finger,
C2H2-type
(1130 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 51 5e-06
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 41 0.005
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 40 0.007
At5g43070.1 68418.m05258 MFP1 attachment factor, putative contai... 36 0.12
At5g26230.1 68418.m03123 expressed protein predicted protein, Ar... 36 0.20
At1g30750.1 68414.m03758 expressed protein 36 0.20
At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identica... 35 0.27
At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family... 35 0.27
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 35 0.35
At4g38900.2 68417.m05511 bZIP protein vsf-1 protein, Lycopersico... 34 0.47
At4g38900.1 68417.m05510 bZIP protein vsf-1 protein, Lycopersico... 34 0.47
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 33 0.82
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 33 0.82
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote... 33 0.82
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 33 1.1
At1g77310.1 68414.m09004 wound-responsive protein, putative simi... 33 1.4
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 32 2.5
At5g04140.2 68418.m00402 glutamate synthase (GLU1) / ferredoxin-... 32 2.5
At5g04140.1 68418.m00401 glutamate synthase (GLU1) / ferredoxin-... 32 2.5
At1g52690.2 68414.m05950 late embryogenesis abundant protein, pu... 32 2.5
At1g52690.1 68414.m05949 late embryogenesis abundant protein, pu... 32 2.5
At3g28980.1 68416.m03622 expressed protein 31 3.3
At1g68370.1 68414.m07809 gravity-responsive protein / altered re... 31 3.3
At5g17510.1 68418.m02054 expressed protein 31 4.4
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 31 4.4
At1g72390.1 68414.m08373 expressed protein 31 4.4
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 31 4.4
At3g10250.2 68416.m01227 expressed protein 31 5.8
At3g10250.1 68416.m01226 expressed protein 31 5.8
At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) ... 31 5.8
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 5.8
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 30 7.6
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 30 7.6
At3g21600.2 68416.m02725 senescence/dehydration-associated prote... 30 7.6
At3g21600.1 68416.m02724 senescence/dehydration-associated prote... 30 7.6
At3g19070.1 68416.m02422 cell wall protein-related similar to ve... 30 7.6
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 30 7.6
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 30 7.6
At1g05530.1 68414.m00567 UDP-glucoronosyl/UDP-glucosyl transfera... 30 7.6
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 50.8 bits (116), Expect = 5e-06
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 904 TTSTVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLW 963
TT + LC ++ C K F + L H +H+ G YVC C GK
Sbjct: 74 TTEILFLCSYDGCGKTFFDVSALRKH---SHIH---GERQYVCDQEGC---GKKFLDSSK 124
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L+RH L H G + + C +GC + FS L H+ H
Sbjct: 125 LKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
Score = 37.9 bits (84), Expect = 0.038
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHAL 969
+C E C K+F + L H G NY+C + C GK L H
Sbjct: 109 VCDQEGCGKKFLDSSKL-----KRHYLIHTGERNYICTYEGC---GKAFSLDFNLRSHMK 160
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERHV 998
+H C GC +R++ + L+ HV
Sbjct: 161 THSQENYHICPYSGCVKRYAHEYKLKNHV 189
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 40.7 bits (91), Expect = 0.005
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 914 EDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGG 973
++C EF+ L H+Q+ +E ++ C C + + L RH L+H G
Sbjct: 69 QECGAEFKKPAHLKQHMQSHSLE-----RSFTCYVDDCAASYR---RKDHLNRHLLTHKG 120
Query: 974 NKPFKCIVDGCERRFSTQILLERHVNNH 1001
K FKC + C+ FS Q + RHV +
Sbjct: 121 -KLFKCPKENCKSEFSVQGNVGRHVKKY 147
Score = 32.7 bits (71), Expect = 1.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 929 HIQNAH-VETQAGRENYVCLWSQ-------CKVRGKPSCSRLWLERHALSHGGNKPFKCI 980
HIQ+ H +E + R++ C + C+ G L++H SH + F C
Sbjct: 38 HIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCY 97
Query: 981 VDGCERRFSTQILLERHVNNH 1001
VD C + + L RH+ H
Sbjct: 98 VDDCAASYRRKDHLNRHLLTH 118
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 906 STVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLE 965
S C C K F N+ L HI++ H C++ G + ++
Sbjct: 244 SVEAFCSEPGCMKYFTNEECLKSHIRSCHQHIN------------CEICGSKHLKKN-IK 290
Query: 966 RHALSHGGNKP---FKCIVDGCERRFSTQILLERHV 998
RH +H + KC V+GC FS L++H+
Sbjct: 291 RHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHM 326
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 40.3 bits (90), Expect = 0.007
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 27/207 (13%)
Query: 801 QITVLKDVSSNVQNTVIEA-NFCGSTTESESGIGTDKSIDSPSDSQ--TSKECDEDSALS 857
++++ +VSS+ VIEA N G + ++ D+P S C+ +
Sbjct: 1107 ELSMESEVSSSENTEVIEAPNSMGEAKKKRKIESESETNDNPESSIGFIRSPCEGLRSRG 1166
Query: 858 LSISLCSVDIQ-SQKSPILKQP--KTLRFPPKSHLSKPGGNNKRKSSTDTTSTVLLCLWE 914
+ C ++ ++ S K+P K L+ PK+ + R+ TT+ C E
Sbjct: 1167 KRKATCETSLKHTETSDEEKKPIAKRLKKTPKAC------SGSRQQEVPTTTHPNRCYLE 1220
Query: 915 DCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALSHGGN 974
CK FE+ L H +N C C GK + +L H H
Sbjct: 1221 GCKMTFESKAKLQTHKRNR------------CTHEGC---GKKFRAHKYLVLHQRVHKDE 1265
Query: 975 KPFKCIVDGCERRFSTQILLERHVNNH 1001
+PF+C GC F Q H+ H
Sbjct: 1266 RPFECSWKGCSMTFKWQWARTEHLRLH 1292
>At5g43070.1 68418.m05258 MFP1 attachment factor, putative contains
similarity to MFP1 attachment factor 1 similar to MFP1
attachment factor 1 [Glycine max] gi|7546729|gb|AAF63659
Length = 155
Score = 36.3 bits (80), Expect = 0.12
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 664 IANYATQALHSSSIPIAPVKPPDN----PIQGTDP-PSSTVLESDLFEKTKKKCDIPWLS 718
+A T+++ +SS P P+ +N P T+ P+ + ++ T+K D
Sbjct: 1 MAETETESITTSSPP--PISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDA---- 54
Query: 719 KTVNNNIFSLDTNKISSRPFAEVGNLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIR 778
+N I +L T I S+ F G+L + A I+DE Y ++ +D EI
Sbjct: 55 -VINRLIETLSTESILSKRF---GSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEIL 110
Query: 779 KGYSEELRK 787
K YS+E+ K
Sbjct: 111 KAYSKEISK 119
>At5g26230.1 68418.m03123 expressed protein predicted protein,
Arabidopsis thaliana
Length = 341
Score = 35.5 bits (78), Expect = 0.20
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 248 TKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKK-----KQMHSKLEPKVNGIVSSTTS 302
T L + S ATT++ PS ++R +T+ +K K ++ KL PK + + + +S
Sbjct: 160 TNLHHHSSSSSTATTAAAPSSVKRMSSTAKEVIRKYMKKVKPLYEKLSPKQSSNIKTESS 219
Query: 303 TRLDSSMNGV 312
+ L S N +
Sbjct: 220 SSLKDSGNNI 229
>At1g30750.1 68414.m03758 expressed protein
Length = 212
Score = 35.5 bits (78), Expect = 0.20
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 415 SMTMNGPLGSLNVPVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPN- 473
S +N PL L+ P+ ++QP G +T++ + N LT P +
Sbjct: 58 SSPVNQPLTGLSQPLIGFNQPSSTGLKQPILGQPSTSSSVNQPLTGINQPLTGFNQPSST 117
Query: 474 GLTAPSIGQQNGISAFNRPNVNVQSPT 500
GL P +GQ + S+ N+P P+
Sbjct: 118 GLNNPILGQPSTSSSLNQPLTGFNQPS 144
>At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identical
to ARF6 [Arabidopsis thaliana] GI:4102600 (Science 276
(5320), 1865-1868 (1997))
Length = 933
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 490 NRPNVNVQSPTKLNSQFVFPLMQNLNGTVVQLPNLMTKMPNFMLQQASQLAMQRQDHLQN 549
N P ++QSP+ + Q L Q L+ QL + QQ QL+ Q+Q L
Sbjct: 465 NSPGFSMQSPSLVQPQM---LQQQLSQQQQQLSQQQQQQQQLSQQQQQQLSQQQQQQLSQ 521
Query: 550 QQSPQI 555
QQ Q+
Sbjct: 522 QQQQQL 527
>At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 480
Score = 35.1 bits (77), Expect = 0.27
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 18/193 (9%)
Query: 419 NGPLGSLNVPVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAP 478
N LGS+++P N L N P N+ + + +L + + L + P L P
Sbjct: 277 NSLLGSVDLP-NPLNNIRPENVPPQVSAASPLWSLDCPIQSENVLPLVSATSP---LDWP 332
Query: 479 SIGQQNGISAFNRPNVNVQSPTKLNSQFVFPLMQNLNGTVVQLPNLMTKMPNFMLQQASQ 538
+ QN + N P + T + FP QN V+ +L P LQ +
Sbjct: 333 N--PQNNLQPENVPPL--VPATSPSMSLDFPNFQNTPPQVLVTSSLDWPNPQNNLQPDNV 388
Query: 539 LAM---------QRQDHLQNQQSPQILVNGTLLKLGNTMTSAYPNMNKPTSVTNTIPMLN 589
L + Q ++++Q + P ++ L L N + P N P V T+P+++
Sbjct: 389 LPVTSPLDWTPNQLENYVQLENVPPLVPENLPLDLPNPQNNLQPE-NVPPLVPETLPLMS 447
Query: 590 KTVPGLQTVSVPV 602
+P Q PV
Sbjct: 448 VDLPNFQNTPPPV 460
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 964 LERHALSHGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
L RH L+H G K FKC + C+ FS Q + RHV +
Sbjct: 23 LNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKY 59
Score = 30.7 bits (66), Expect = 5.8
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 906 STVLLCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLE 965
S C C K F N+ L HI++ H C++ G + ++
Sbjct: 156 SVEAFCSEPGCMKYFTNEECLKSHIRSCHQHIN------------CEICGSKHLKKN-IK 202
Query: 966 RHALSHGGNKP---FKCIVDGCERRFSTQILLERHV 998
RH +H + KC V+GC FS L++H+
Sbjct: 203 RHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHM 238
>At4g38900.2 68417.m05511 bZIP protein vsf-1 protein, Lycopersicon
esculentum, PIR2:S52203
Length = 547
Score = 34.3 bits (75), Expect = 0.47
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 141 MDVEKQTEVASKHPAHSANGLLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGF 200
M++E + S S NG N + +KTNG + G S +NE + +MN
Sbjct: 235 MNLENIDVLNSSEADDSKNGNENRDDMESSRASGTKTNGSDTEGESSSVNESANNNMNSS 294
Query: 201 VEMRHSV 207
E R SV
Sbjct: 295 GEKRESV 301
>At4g38900.1 68417.m05510 bZIP protein vsf-1 protein, Lycopersicon
esculentum, PIR2:S52203
Length = 553
Score = 34.3 bits (75), Expect = 0.47
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 141 MDVEKQTEVASKHPAHSANGLLNTKSEAKKPSCKSKTNGLISFGNSKHINEKVSTSMNGF 200
M++E + S S NG N + +KTNG + G S +NE + +MN
Sbjct: 235 MNLENIDVLNSSEADDSKNGNENRDDMESSRASGTKTNGSDTEGESSSVNESANNNMNSS 294
Query: 201 VEMRHSV 207
E R SV
Sbjct: 295 GEKRESV 301
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 33.5 bits (73), Expect = 0.82
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 804 VLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSAL 856
V+K +S++V I NF E ES + S ++PSDS + + D S++
Sbjct: 763 VVKKISNSVTANKITTNFFKDAEEDESKTTSSDSSNAPSDSSSDNDSDVTSSM 815
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 33.5 bits (73), Expect = 0.82
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 805 LKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCS 864
+K +S++V NF E ES T S +PSDS + + D S++ + + S
Sbjct: 914 VKKISNSVTANKSTTNFFKDAEEDESKTTTSDSTKAPSDSSSDNDSDVTSSMHMKQGILS 973
Query: 865 VDI 867
I
Sbjct: 974 TQI 976
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 222 GLLDGKQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSK 268
G +DG K E K V PS++G ++ + N+ S P K
Sbjct: 835 GSIDGSMKMKETKGRVQPSSSGTSQLQSMAKNDRSGSKVDLSDAPMK 881
>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase (RKL1),
Arabidopsis thaliana, EMBL:AF084034
Length = 660
Score = 33.5 bits (73), Expect = 0.82
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 422 LGSLNVPVNNLQNC-HPLNIQQPCNGSVTTNNLASFVAVPQNMM-LTTLRIPPN-GLTAP 478
L SLN+ N L PLN+ + +V++NNL V + + ++ N GL
Sbjct: 172 LSSLNLEFNRLNGTLPPLNLSSLISFNVSSNNLTGLVPLTKTLLRFNASSFSSNPGLCGE 231
Query: 479 SIGQQNGISA----FNRPNVNVQSPTKLNSQFVFPLMQN-LNGTVVQL-PNLMTKMPN 530
I + G+ + F P N S T S P++Q+ NG + P ++ K+ N
Sbjct: 232 IINRSCGLHSSSPFFGSPKPNTTSSTSSASSSEAPVIQSEQNGEAAMIVPPVVKKVKN 289
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 910 LCLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHAL 969
+C + C K F + L+ H Q H + + + C W CK+ K + SR H
Sbjct: 1261 ICPIKGCGKNFFSHKYLVQH-QRVHSDDRPLK----CPWKGCKMTFKWAWSRT---EHIR 1312
Query: 970 SHGGNKPFKCIVDGCERRFSTQILLERH 997
H G +P+ C C + F RH
Sbjct: 1313 VHTGARPYVCAEPDCGQTFRFVSDFSRH 1340
Score = 31.1 bits (67), Expect = 4.4
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 15/91 (16%)
Query: 911 CLWEDCKKEFENDPDLLDHIQNAHVETQAGRENYVCLWSQCKVRGKPSCSRLWLERHALS 970
C E C F ++ L+ H +N +C C GK S +L +H
Sbjct: 1239 CNMEGCTMSFSSEKQLMLHKRN------------ICPIKGC---GKNFFSHKYLVQHQRV 1283
Query: 971 HGGNKPFKCIVDGCERRFSTQILLERHVNNH 1001
H ++P KC GC+ F H+ H
Sbjct: 1284 HSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH 1314
>At1g77310.1 68414.m09004 wound-responsive protein, putative similar
to wound-responsive protein 14.05 (GI:16506638)
[Castanea sativa]
Length = 699
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 202 EMRHSVSDQFSKEK-LPGILNGLLDGKQKNNELKNSVGPSTNGIVKITKLTSNESKRKLA 260
E+R ++ + + + L G + +D + + + + P + GI K + E K +
Sbjct: 528 EIRRAICREKERRRALEGNIGKEMDQTKITKKKQTQLVPKSEGITYPDKTSGVEVKASVV 587
Query: 261 TTSSEPSKIRRAPATSAGQTKKKQMHSKLE 290
T++ S + PA + + KQ H KL+
Sbjct: 588 LTATTTSLVDCQPAADSSFERSKQQHEKLK 617
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 973 GNKPFKCIVDGCERRFSTQILLERH-VNNH-FNXXXXXXXXXXXXXXXXXXLIRRNGKKL 1030
G ++C+V+GC +F T RH ++ H F L R++ KL
Sbjct: 205 GYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQRQHVSKL 264
Query: 1031 RYR--RQPWSARMFDFFDAGTMEGLVWRLMRCT 1061
++ ++ S+ + D G+++GLV L T
Sbjct: 265 KHEEDKEAASSDAMEVEDKGSLDGLVSALSSLT 297
>At5g04140.2 68418.m00402 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1648
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 90 HKMKPQNGLKRDASVLANDDTKKKCLPKNGVTHDLEKYISYLSQTLSPKVLMDVEKQTEV 149
H+ QNGL+ AS++A DT + C TH + Y + + P + ++ +Q +
Sbjct: 762 HQHLIQNGLRMSASIVA--DTAQ-CFS----THHFACLVGYGASAVCPYLALETCRQWRL 814
Query: 150 ASKHPAHSANGLLNTKS--EAKKPSCKSKTNGLI 181
++K A NG + T + +A+K K+ GL+
Sbjct: 815 SNKTVAFMRNGKIPTVTIEQAQKNYTKAVNAGLL 848
>At5g04140.1 68418.m00401 glutamate synthase (GLU1) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 1)
identical to ferredoxin-dependent glutamate synthase
precursor [Arabidopsis thaliana] GI:3869251
Length = 1622
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 90 HKMKPQNGLKRDASVLANDDTKKKCLPKNGVTHDLEKYISYLSQTLSPKVLMDVEKQTEV 149
H+ QNGL+ AS++A DT + C TH + Y + + P + ++ +Q +
Sbjct: 736 HQHLIQNGLRMSASIVA--DTAQ-CFS----THHFACLVGYGASAVCPYLALETCRQWRL 788
Query: 150 ASKHPAHSANGLLNTKS--EAKKPSCKSKTNGLI 181
++K A NG + T + +A+K K+ GL+
Sbjct: 789 SNKTVAFMRNGKIPTVTIEQAQKNYTKAVNAGLL 822
>At1g52690.2 68414.m05950 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 169
Score = 31.9 bits (69), Expect = 2.5
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 1/123 (0%)
Query: 227 KQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMH 286
+QK +E S T+ + T+ + ESK K + SE + + A A + K+
Sbjct: 48 QQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAE 107
Query: 287 SKLEPKVNGIVSSTTSTRLDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRS 346
+ E K +GI+ T +M + L L TR +
Sbjct: 108 AGKE-KTSGILGQTGEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTTTTTTTRET 166
Query: 347 NRK 349
RK
Sbjct: 167 QRK 169
>At1g52690.1 68414.m05949 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 169
Score = 31.9 bits (69), Expect = 2.5
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 1/123 (0%)
Query: 227 KQKNNELKNSVGPSTNGIVKITKLTSNESKRKLATTSSEPSKIRRAPATSAGQTKKKQMH 286
+QK +E S T+ + T+ + ESK K + SE + + A A + K+
Sbjct: 48 QQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAE 107
Query: 287 SKLEPKVNGIVSSTTSTRLDSSMNGVTCGSNNLSLNPVXXXXXXXXXXXXXXXXQVTRRS 346
+ E K +GI+ T +M + L L TR +
Sbjct: 108 AGKE-KTSGILGQTGEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTTTTTTTRET 166
Query: 347 NRK 349
RK
Sbjct: 167 QRK 169
>At3g28980.1 68416.m03622 expressed protein
Length = 445
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/79 (21%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 769 KREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCGSTTES 828
+++++ +E +E+ ++++E + ETI T+IT NT++ + +++
Sbjct: 147 RKKEENEETMTLTAEQQKEIKEGILKWETIITRIT----------NTMVSSTSTSASSSE 196
Query: 829 ESGIGTDKSIDSPSDSQTS 847
ES +G + + +S+TS
Sbjct: 197 ESSVGKESETSAKGESETS 215
>At1g68370.1 68414.m07809 gravity-responsive protein / altered
response to gravity protein (ARG1) identical to Altered
Response to Gravity [Arabidopsis thaliana] GI:4249662;
contains Pfam profile PF00226 DnaJ domain
Length = 410
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 723 NNIFSLDTNKISSRPFAEVGNLSEKLEELAA--VKIKDECYFNIDKSIKREDKRQEIRKG 780
+N F + I + + +EKL+E+ A ++ ++E + K + QE+
Sbjct: 269 DNFFKTASYTIEALCAKTYEDTTEKLKEIEAQILRKRNELRQFETEYRKALARFQEVTNR 328
Query: 781 YSEELRKVEEVARREETIFTQITVLKDVSSN 811
Y++E + V+E+ ++ +TI + +V+K S N
Sbjct: 329 YTQEKQTVDELLKQRDTIHSTFSVVKTPSGN 359
>At5g17510.1 68418.m02054 expressed protein
Length = 369
Score = 31.1 bits (67), Expect = 4.4
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 482 QQNGISAF-NRPNVNVQSPTKLNSQFVFPLMQNLNGTVVQLPNLMTKMPNFMLQQ----A 536
QQ +S F + +V+++ P + ++ + P Q N T PNL + PNF QQ +
Sbjct: 50 QQAAMSRFPSNIDVHLRPPGLIQNRPINPPPQQ-NPT--PNPNLGQQTPNFQQQQQQNVS 106
Query: 537 SQLAMQRQDHLQNQQSPQILVNGTLLKLG--NTMTSAYPNMNKPTS 580
SQ MQ+Q Q QQ +N L+ + +PN +P S
Sbjct: 107 SQQMMQQQQQQQQQQKLMRPLNHIELQCAYQDAWRVCHPNFKQPFS 152
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 31.1 bits (67), Expect = 4.4
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 3/152 (1%)
Query: 743 NLSEKLEELAA-VKIKDECYFNIDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQ 801
+LSE+ E A V + DE D ++ + E +G E ++ + ++ T T+
Sbjct: 440 DLSERTETKAPEVVVMDEAREEEDSVETKDTRTYETIRGLEIEANEMIDEETKKSTE-TK 498
Query: 802 ITVLKDVSSNVQNTVIEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSIS 861
+ + + + TE+ S I + D + + ++ DE ALS S
Sbjct: 499 TEAPSRIVMDKEGDEETKKSTETETEAPSRIVMETEKDEETMNSRARASDEAEALSKSSQ 558
Query: 862 LCSVDIQSQKSPILK-QPKTLRFPPKSHLSKP 892
+ S+++ +SP ++ RF SH +P
Sbjct: 559 VASMELSISQSPRVRFSSLAPRFLAASHHHRP 590
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 31.1 bits (67), Expect = 4.4
Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 8/143 (5%)
Query: 420 GPLGSLNVPVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVP-QNMMLTTLRIPPNGLTAP 478
G S++VP +P+N+ N + + L S P QN + T +R+
Sbjct: 805 GISSSMSVPGIGNMGQNPMNLNPASNLNAISQQLRSGALTPQQNALFTQIRMGMANRGGV 864
Query: 479 SIGQQNGISAFNRPNVNVQSPTKLNSQFVFPLMQNLNGTVVQ----LPNLMTKMPN-FML 533
Q GIS + P+ + NL P LM M N +M
Sbjct: 865 MGAPQTGISGVS--GTRQMHPSSAGLSMLDQNRANLQRAAAMGNMGPPKLMPGMMNLYMN 922
Query: 534 QQASQLAMQRQDHLQNQQSPQIL 556
QQ Q +Q+Q Q Q Q L
Sbjct: 923 QQQQQQQLQQQPQQQQLQHQQQL 945
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 31.1 bits (67), Expect = 4.4
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 109 DTKKKCLPKNGVTHDLEKYISYL-------SQTLSPKVLMDVEKQTEVASKHPAHSANGL 161
+TK+KCLP++ +H L +Y+S S + D EK + K + + N +
Sbjct: 733 ETKQKCLPESNKSHVLVRYLSPAIGGTDSGSVEQGKDICFDEEKWDDFNEKSISQAFNDV 792
Query: 162 LNTKSEAKKPSCKSKTNGLISFGNSKHINE 191
L K AK + K +T + N I+E
Sbjct: 793 LELKKMAKLVAPK-RTKSSREWSNRDIIDE 821
>At3g10250.2 68416.m01227 expressed protein
Length = 324
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Query: 421 PLGSLNVPVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSI 480
P G +V N + +N +Q C S T+ + M + NG + +
Sbjct: 96 PTGVASVQNTNGSHLQSMNQKQLCYPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNT 155
Query: 481 GQQNGISAFNRPNVNVQSPTKLNSQFV-FPLMQNLNGTVVQLPNLMTKMPNFM 532
+ I+ SP L+SQ P+MQ +NG +++ T +FM
Sbjct: 156 NVPSSINISTHARRVDASPNMLSSQTTNMPMMQGMNGGMIKSETAFTNPASFM 208
>At3g10250.1 68416.m01226 expressed protein
Length = 324
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Query: 421 PLGSLNVPVNNLQNCHPLNIQQPCNGSVTTNNLASFVAVPQNMMLTTLRIPPNGLTAPSI 480
P G +V N + +N +Q C S T+ + M + NG + +
Sbjct: 96 PTGVASVQNTNGSHLQSMNQKQLCYPSEHTDQSLKSESAHHPMASSLSNAFLNGSSTLNT 155
Query: 481 GQQNGISAFNRPNVNVQSPTKLNSQFV-FPLMQNLNGTVVQLPNLMTKMPNFM 532
+ I+ SP L+SQ P+MQ +NG +++ T +FM
Sbjct: 156 NVPSSINISTHARRVDASPNMLSSQTTNMPMMQGMNGGMIKSETAFTNPASFM 208
>At2g41220.1 68415.m05090 glutamate synthase, chloroplast (GLU2) /
ferredoxin-dependent glutamate synthase (Fd-GOGAT 2)
identical to SP|Q9T0P4 Ferredoxin-dependent glutamate
synthase 2, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT
2) {Arabidopsis thaliana}
Length = 1629
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 90 HKMKPQNGLKRDASVLANDDTKKKCLPKNGVTHDLEKYISYLSQTLSPKVLMDVEKQTEV 149
H+ QNGL+ AS++A DT +C TH I Y + + P + ++ +Q +
Sbjct: 738 HQHLIQNGLRMSASIIA--DT-AQCFS----THHFACLIGYGASAICPHLALETCRQWRL 790
Query: 150 ASKHPAHSANGLLN--TKSEAKKPSCKSKTNGLI 181
++K NG + T +A+K K+ GL+
Sbjct: 791 SNKTVNMMRNGKMPTVTMEQAQKNYRKAVNTGLL 824
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 30.7 bits (66), Expect = 5.8
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 874 ILKQPKTLRFPPKSHLSKPGGNNKRKSSTDTTSTVLLC----LWEDCKKEFENDPDLLDH 929
+++QP + PPK ++PG N + L+ + + C K F+ + +L H
Sbjct: 42 MIQQPNSSAPPPKKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLH 101
Query: 930 IQNAHV--------ETQAGRENYVCLWSQCKVRGKPSCS---RLWLERHALSHGGNKPFK 978
+ ++ + R+ Y+C C V PS + +++H G K +K
Sbjct: 102 RRGHNLPWKLKQKSTKEVKRKVYLCPEPTC-VHHDPSRALGDLTGIKKHYYRKHGEKKWK 160
Query: 979 CIVDGCERRFSTQ 991
C + C +R++ Q
Sbjct: 161 C--EKCSKRYAVQ 171
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 30.3 bits (65), Expect = 7.6
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 817 IEANFCGSTTESESGIGTDKSIDSPSDSQTSKECDEDSALSLSISLCSVDIQSQK 871
I A F G T ESE ++ S DS + S++S E +E SL+I CS +S K
Sbjct: 55 IPAIFSGYTAESEDSSSSEMSDDSRTYSKSSDENEELDQASLTI--CSERPRSVK 107
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 30.3 bits (65), Expect = 7.6
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 769 KREDKRQEIRKGYSEELRKVEEVARREETIFTQITVLKDVSSNVQNTVIEANFCG----S 824
K +D E+ G E+ + EV ++ T+ + + S +N V+E + +
Sbjct: 166 KGDDASSEVMHGTEEKSNEKVEVEGESKSNSTENVSVHEDESGPKNEVLEGSVIKEVSLN 225
Query: 825 TTESESGIGTDKSIDSPSDSQTSKECDEDS 854
TTE+ S G + S DS+T ++ DS
Sbjct: 226 TTENGSDDGEQQETKSELDSKTGEKGFSDS 255
>At3g21600.2 68416.m02725 senescence/dehydration-associated
protein-related similar to senescence-associated protein
12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; similar to early-responsive to
dehydration stress ERD7 protein [Arabidopsis thaliana]
gi|15320412|dbj|BAB63916
Length = 299
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 184 GNSKHINEKVSTSMNGFVEMRHSVSDQFSKEKLPGILNGLLD-GKQKNNELKNSVGPSTN 242
G + HI + + N + H D + NG + G NE KN +
Sbjct: 180 GGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQ 239
Query: 243 GIVKITKLTSNESKRKL 259
+ K++K T N SK L
Sbjct: 240 RVRKLSKATENLSKTML 256
>At3g21600.1 68416.m02724 senescence/dehydration-associated
protein-related similar to senescence-associated protein
12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; similar to early-responsive to
dehydration stress ERD7 protein [Arabidopsis thaliana]
gi|15320412|dbj|BAB63916
Length = 374
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 184 GNSKHINEKVSTSMNGFVEMRHSVSDQFSKEKLPGILNGLLD-GKQKNNELKNSVGPSTN 242
G + HI + + N + H D + NG + G NE KN +
Sbjct: 180 GGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQ 239
Query: 243 GIVKITKLTSNESKRKL 259
+ K++K T N SK L
Sbjct: 240 RVRKLSKATENLSKTML 256
>At3g19070.1 68416.m02422 cell wall protein-related similar to
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii] gi|12018147|gb|AAG45420;
Length = 346
Score = 30.3 bits (65), Expect = 7.6
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 743 NLSEKLEELAAVKIKDECYFNIDKSIKREDKRQEIRKGYSEELRKVEEVARREETIFTQI 802
NL E LEEL++++ + ID+ +K+ D +E ++ E+ K+ + R +I
Sbjct: 3 NLDEFLEELSSIESHSQKIVKIDEHLKKLD--EETKEDEDEDAAKI--IQDRSTAREAEI 58
Query: 803 TVLKDVSSN 811
+L D+ N
Sbjct: 59 ALLMDLRQN 67
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 764 IDKSIKREDKRQEIRKGYSEELRKVEEVARREE 796
I++ +RE++ E R+ EE RK EE RREE
Sbjct: 432 IEERKRREEEEIERRRKEEEEARKREEAKRREE 464
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 30.3 bits (65), Expect = 7.6
Identities = 23/79 (29%), Positives = 31/79 (39%)
Query: 193 VSTSMNGFVEMRHSVSDQFSKEKLPGILNGLLDGKQKNNELKNSVGPSTNGIVKITKLTS 252
+S S + VE R S LP +++G D + N I K TKL
Sbjct: 44 MSFSPSAPVESRDSSIKVNKNPSLPPLVDGEEDASWLEFGSSDYTDDELNKIAKSTKLQD 103
Query: 253 NESKRKLATTSSEPSKIRR 271
KL S+P K+RR
Sbjct: 104 IAKSTKLQEIVSDPKKVRR 122
>At1g05530.1 68414.m00567 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 30.3 bits (65), Expect = 7.6
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 503 NSQFVFPLMQNLNGTVVQLPNLMTKMPNFMLQQASQLAMQRQDHLQNQQSPQILVNGTLL 562
NS F FP + +L + LP+ ++ P+ + A + + D L+ + +P+ILVN T
Sbjct: 152 NSVFEFPNLPSLE--IRDLPSFLS--PSNTNKAAQAVYQELMDFLKEESNPKILVN-TFD 206
Query: 563 KLGNTMTSAYPNM 575
L +A PN+
Sbjct: 207 SLEPEFLTAIPNI 219
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,941,101
Number of Sequences: 28952
Number of extensions: 1037892
Number of successful extensions: 2901
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2848
Number of HSP's gapped (non-prelim): 77
length of query: 1130
length of database: 12,070,560
effective HSP length: 89
effective length of query: 1041
effective length of database: 9,493,832
effective search space: 9883079112
effective search space used: 9883079112
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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