Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000847-TA|BGIBMGA000847-PA|undefined
(104 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 32 0.10
SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_26221| Best HMM Match : RVT_1 (HMM E-Value=1.6e-24) 31 0.13
SB_16221| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 31 0.18
SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.31
SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_52526| Best HMM Match : LEA_4 (HMM E-Value=0.98) 30 0.41
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.41
SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 0.71
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.94
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 1.6
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 1.6
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91) 27 2.2
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 27 2.2
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 27 2.9
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 27 3.8
SB_12801| Best HMM Match : TSP_3 (HMM E-Value=2.3e-39) 27 3.8
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 3.8
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 26 5.0
SB_30782| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6) 26 5.0
SB_27924| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.7
SB_25612| Best HMM Match : Cadherin (HMM E-Value=0.034) 26 6.7
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 26 6.7
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 25 8.8
SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 25 8.8
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 25 8.8
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 25 8.8
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 25 8.8
SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014) 25 8.8
SB_9984| Best HMM Match : Orthopox_C10L (HMM E-Value=4.4) 25 8.8
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 25 KGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDES 83
+G +S +D D ES+ + + R SES +DR E+ + V+ Y KP +S
Sbjct: 560 RGISESLSSTDFEEDLESLASTNLRSRDDSESISSADRRSRGENESEDVSTYSKPEFDS 618
>SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 39 DDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKR 91
+D + S F + +T E ++ + + TVV YR+P D+S+ D + K+
Sbjct: 57 EDVDIVDSDFSQSETEEVIEQDEDEPKRKKKKTVVKAYRRPKDDSDEDKKSKQ 109
>SB_26221| Best HMM Match : RVT_1 (HMM E-Value=1.6e-24)
Length = 488
Score = 31.5 bits (68), Expect = 0.13
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 42 SVKLSYFKKR-KTSESCDKSDRHGVAEDGTTVVT-----DYRKPSDESEVDDRK 89
S +L+Y ++ K + +CDKS HG +DG T T +Y K D V DR+
Sbjct: 435 SAELTYQERSAKITLNCDKSKSHGSFDDGITETTTIASSEYLKIIDNCNVFDRR 488
>SB_16221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 26 GHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAED 68
G R S CS DD+ + + K+ TS SC +S RH +D
Sbjct: 567 GSRRSSSCSSSDADDDELD-KHMKRLDTSSSCRRSPRHRQHDD 608
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 31.1 bits (67), Expect = 0.18
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 32 KCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGT-----TVVTDYRKPSDESEVD 86
K D+ DD++VK + DK D V +D +VV D K D+S VD
Sbjct: 754 KKKDVDVDDDNVKEG---NDADDDEDDKDDDDSVVDDNDKDDDDSVVDDNDKDDDDSVVD 810
Query: 87 DRKK---RCIDRYDSSESSD 103
D K +D YD + D
Sbjct: 811 DNDKDDDDSVDDYDDDDHDD 830
>SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 30.3 bits (65), Expect = 0.31
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 40 DESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPS-DESEVDDRKKRCIDRYDS 98
DE KL K R+ S D GTT++ D S +S +D R+++ D+ DS
Sbjct: 362 DEDAKLEG-KSREDEISEHYQDTGEDVLQGTTLMLDLNDDSLQKSPIDQREQKAEDKADS 420
Query: 99 SESSD 103
S+ +D
Sbjct: 421 SKEAD 425
>SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 29.9 bits (64), Expect = 0.41
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 9 RAGLKQMNNLTFTATDKGHRDSKKCSDIVFD 39
R+ L + L AT+ GH D+KK +D VFD
Sbjct: 48 RSKLASLIELANEATEGGHADNKKVADQVFD 78
>SB_52526| Best HMM Match : LEA_4 (HMM E-Value=0.98)
Length = 243
Score = 29.9 bits (64), Expect = 0.41
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 52 KTSESCDKSDRHGVAEDGTTVVTDYRKPSDESE-VDDRKKRCIDRYDS-SESSDR 104
KT + CDK+D+ G D TD KP D+++ + D+ + D+ D S+ +D+
Sbjct: 149 KTDKPCDKTDKPGDKTDKPCDKTD--KPGDKTDKLGDKTDKPADKTDKPSDKTDK 201
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 29.9 bits (64), Expect = 0.41
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 13 KQMNNLTFTATDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSE----SCDK----SDRHG 64
++ L+++ ++ R+ K SD + KK+K E S DK SD G
Sbjct: 746 RKHEQLSYSDSEDEKREVKSVSDDMLSSNKDNKKRKKKKKEKEKSKQSDDKMRLLSDSPG 805
Query: 65 VAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESSD 103
D ++ RK +V D+K R +D Y S++SSD
Sbjct: 806 -DSDSSSSRDRKRKHRHNDDVTDKKPRLVD-YSSADSSD 842
>SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 29.1 bits (62), Expect = 0.71
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 45 LSYFKKRKTSESCDKSDRHGVAEDGTTVV-TDYRKPSDESEVDDRK 89
++ F ++ S+SC +S +GT VV DY +PS +S R+
Sbjct: 47 IAEFPYKRRSKSCVRSSATTYDREGTVVVFDDYDRPSTKSMTQQRR 92
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 0.71
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 3 DGSPE---DRAGLKQMNNLTFTATDKGHRDSKKCSDIVFD-DESVKLSYFKKRKTSESCD 58
DG E D G+ + + + + D SD + DES + + S D
Sbjct: 67 DGEEEVVTDERGISSSKDESDESDESNESDESNESDKSNESDESNESDESNESDESNESD 126
Query: 59 KSDRHGVA-EDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESS 102
KS+ + E + +D R SDES+ DD + +S ES+
Sbjct: 127 KSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNESDESN 171
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 28.7 bits (61), Expect = 0.94
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 3 DGSPEDRAGLKQMNNLTFTATDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDR 62
DG+ D N + F K D + DI+ +D+++ S+ DK D
Sbjct: 402 DGNFHDVHDGSDENGIVFNT--KKEEDKVEGQDIIDEDKTIPESHTIHLHKPPRDDKQDL 459
Query: 63 HGVAEDGTTVVTDYRKPSDESEV 85
HG ++ D+ K D +E+
Sbjct: 460 HGNIKENGEQEKDHEKAHDATEL 482
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 35 DIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSD--ESEV---DDRK 89
D V DD S LSY + +K + D R V E ++++ + E EV DD +
Sbjct: 1729 DFVPDDSSEGLSYDETKKKVQEIDDDTRKEVQEIDDDTKKEFQEIGNDMEKEVQVNDDAQ 1788
Query: 90 KRCIDRYDSSESSD 103
K+ + +S+S +
Sbjct: 1789 KKEVQEIANSDSEE 1802
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 2 ADGSPEDRAGLKQMNNLTFTATDK-GHRDSKK------CSDIVFDDESVKLSYFKKRKTS 54
+D + +KQ+ + TD+ GH K+ S+ D+ + KK+KTS
Sbjct: 66 SDSGERNTYWMKQLTEFESSCTDRWGHSGYKELYPEEFASNFTDSDDDSEDEKKKKKKTS 125
Query: 55 ESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDR 95
+ KS + + + + E+E++ K++ I R
Sbjct: 126 KKRKKSSSKDERKRKSKKIRTVQSSDSETELNQEKRKRIKR 166
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 21 TATDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAE 67
++ D+ R SKK + D +L+ K+++ + DK+ R E
Sbjct: 132 SSKDERKRKSKKIRTVQSSDSETELNQEKRKRIKRTKDKTSRKSKTE 178
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 40 DESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSS 99
DE+ S K KT ++ K D+ V E D K DE + DD+K +S
Sbjct: 142 DEASGESDDAKPKTKDAEKKDDKKKVDEKKEDEKKDDDKKVDEKKEDDKKNDSSASGESE 201
Query: 100 ESSD 103
+S D
Sbjct: 202 DSDD 205
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 44 KLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDY-RKPS--DESEVDDRK 89
+LS+ +K K ++ +K D G A +GT + +KP ++SE + R+
Sbjct: 478 RLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPELVNQSEAESRE 526
>SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91)
Length = 817
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 29 DSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDR 88
+ ++C D + K++T E DK G++ + + + D SE D+
Sbjct: 334 EKRECGTHAIRDANGHPLQKNKKETGECLDKEKAPGLSGSSAPIADEEAEMMDGSEDDES 393
Query: 89 KKRCIDRYDSSESSDR 104
K+ ++ E D+
Sbjct: 394 DKKQCEKKRDKELQDK 409
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 32 KCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDD 87
KC+D +D ++ FK+ + + + + E GT + + +K + E E +D
Sbjct: 1438 KCTDAGVNDVKIEAKDFKQGNNDVTSNDDKKTAIKEKGTEMSQEDQKFAHEDEDED 1493
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 49 KKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESSDR 104
KK+K E+ ++ D+ E+ +K +E+E +D KK+ + E ++
Sbjct: 1901 KKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEEDDKKKKTKKKKKKEEEEQ 1956
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 49 KKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESSDR 104
KK K + + +R GV ED T + + E+ ++KK+ D+ DR
Sbjct: 40 KKEKRKKMKKEKERKGVPEDADTEMKKKERKEKETFEPEQKKKKKDKKAGKVRDDR 95
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/77 (25%), Positives = 30/77 (38%)
Query: 28 RDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDD 87
RDS + S DD + KK K ++ D S+ +ED K + + D
Sbjct: 183 RDSSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDSEDDRERRKKKVKKEIKHKAKD 242
Query: 88 RKKRCIDRYDSSESSDR 104
+ ID D E +R
Sbjct: 243 SSESSIDSEDDRERKER 259
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 49 KKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESSD 103
+ + S+S DK D GV E G +P D E ++ ++ + E D
Sbjct: 196 ENKDDSKSADKDDDKGVDEKGVDEEGASEEPQDGEEEEEEEEEEESEEEEEEEED 250
>SB_12801| Best HMM Match : TSP_3 (HMM E-Value=2.3e-39)
Length = 252
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 59 KSDRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSE 100
++DR G DG DY + +D +DDR C + +S++
Sbjct: 114 QADRDG---DGIGDACDYNEDTDRDGIDDRHDNCPGKPNSAQ 152
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 KKRKTSESCDKSDRHGVAED-GTTVVTDYRKPSDESEVDD 87
KK+ +S+S +KSD G ED V DY +P ++ + D
Sbjct: 366 KKKSSSDSDNKSDLDGHDEDEDEDSVGDYVEPPEDIPLQD 405
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 25 KGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKS 60
KGHR+ K V D + +LS+F+ K SC ++
Sbjct: 349 KGHRNKWKRMFCVLDADEQRLSFFENEKVG-SCTQT 383
>SB_30782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 25 KGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKS 60
KGHR+ K V D + +LS+F+ K SC ++
Sbjct: 78 KGHRNKWKRMFCVLDADEQRLSFFENEKVG-SCTQT 112
>SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 478
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 23 TDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRK 78
T+K H+D+ + + F +E V+L +K +E +++ ++ T + Y++
Sbjct: 113 TEKKHKDTLQQMEHKFFEEKVRLQQEASKKIAELAERAHTEAISNLDETTRSVYKE 168
>SB_27924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 39 DDESVKLSYFKKRK-TSESCDKSDRHGVAEDGTTVVTDYRKPSDESEV 85
DD+S R S++ S RH + DG D +KPS +S V
Sbjct: 67 DDQSGPRGRLSSRVIVSQTSQVSARHSLDSDGEEEEDDSKKPSIQSSV 114
>SB_25612| Best HMM Match : Cadherin (HMM E-Value=0.034)
Length = 177
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 39 DDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVD 86
D+ES K + KKR+ + DK+ ++ A V + + PS S VD
Sbjct: 72 DNESAKKAPGKKRQAQKKTDKAAKN-PANKEENVSEENKWPSSRSTVD 118
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 29 DSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDR 88
D K+ V DES + K+++ + D S R + D D K +S +DD+
Sbjct: 398 DDKEKRPDVNKDESQRSRDDKEKRPDINKDDSQR---SRDDKEKRPDVNKDDSQSSIDDK 454
Query: 89 KKR 91
+KR
Sbjct: 455 EKR 457
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 25.4 bits (53), Expect = 8.8
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 22 ATDKGHRDSKKCSDIVFDDESVK---LSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRK 78
A+ + R S + D+ D ++ K L F + K S + DK RH V + +++V +
Sbjct: 1350 ASPRSGRKSLESGDVSLDAQAQKSTGLPRFMEVKYSVT-DKDKRHRVPVEMSSLVKKGEE 1408
Query: 79 PSDESEVDDRKKRCIDRYD 97
DE + D + D D
Sbjct: 1409 IEDELKTDSQANEHFDDAD 1427
>SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 32 KCSDIVFDDESVKLSYFKKRKTSESCDKS 60
+C + D+ ++ YFK+R+ S+ D S
Sbjct: 703 ECPLVSSDESEAEVEYFKERQNSKQSDSS 731
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 49 KKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKK 90
K + S+ K D+H A T D R S S +++RK+
Sbjct: 979 KMKDLSKGLSKDDKHAPALQATVKRQDERWTSMRSALEERKR 1020
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 25.4 bits (53), Expect = 8.8
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Query: 3 DGSPEDRAGLKQMNNLTFTATDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDR 62
D P++ K+ + F D+ D KK D D+ +K ES ++SD
Sbjct: 175 DEDPKEDVAAKKYEDDQF---DEDDDDDKKDDDDDKTDDDDDKKDAEKEDKDESGNESDS 231
Query: 63 HGVAEDGTTVVTDYRKPSDESEV-DDRKKRCIDRYDSSESSDR 104
+ ++ +D E + DD +K+ D Y S++
Sbjct: 232 SSSSSSSSSSSSDDDDSDHEKDADDDDEKKDKDEYKDDFESEK 274
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 12 LKQMNNLTFTATDKGHRDSKKCSDIVFDDESVKLSYFKKRKTSESCDKSDR 62
+ + N+T A D GH D C D DD++ K + T++ K +
Sbjct: 322 IDKQENVTSEA-DNGHNDCYTCIDDADDDKAAKNAMTTNATTAKKRKKRSK 371
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 25.4 bits (53), Expect = 8.8
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 8 DRAGLKQMNNLTFTATDKGHRDSKKCSDIVFDDE-------SVKLSYFKKRKTSESCDKS 60
+R+G + LT ++ K + + +K I+ DD+ K + +RK +E K
Sbjct: 474 NRSGKDSQSKLTTQSSAKKNTEEQKQEVIILDDDYSSSEEPVTKRTTRSERKRNELVKKE 533
Query: 61 DRHGVAEDGTTVVTDYRKPSDESEVDDRKKRCIDRYDSSESSD 103
G D + + K + ++ + DSSESSD
Sbjct: 534 VLSG--NDSESSLEKQNKKGTQKGKKGKQAKTSPESDSSESSD 574
>SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014)
Length = 916
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 64 GVAEDGTTVVTDYRKPSDE--SEVDDRKKRCIDRYDSSE 100
GV EDG+T + +YR + V + +K + Y+S+E
Sbjct: 436 GVQEDGSTGIGEYRNRGVQKYGRVWEYRKMGVQEYESTE 474
>SB_9984| Best HMM Match : Orthopox_C10L (HMM E-Value=4.4)
Length = 431
Score = 25.4 bits (53), Expect = 8.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 36 IVFDDESVKLSYFKKRKTSESCDKSDRHGVAEDGTTVVTDYRKPSDESEVDDRKK 90
+VF+ E KLS + S + S G G + +R P D+S++ DR+K
Sbjct: 90 VVFEGEEGKLSVIGGN-SGFSTNHSGHCGGGGGGGVIQVFHRTP-DDSQISDRRK 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,899,381
Number of Sequences: 59808
Number of extensions: 151095
Number of successful extensions: 375
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 349
Number of HSP's gapped (non-prelim): 43
length of query: 104
length of database: 16,821,457
effective HSP length: 72
effective length of query: 32
effective length of database: 12,515,281
effective search space: 400488992
effective search space used: 400488992
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 53 (25.4 bits)
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