SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000846-TA|BGIBMGA000846-PA|IPR001683|Phox-like,
IPR001736|Phospholipase D/Transphosphatidylase
         (1199 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d...   392   e-109
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase...   392   e-109
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    33   0.93 
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    33   0.93 
Z68161-2|CAA92297.1|  361|Caenorhabditis elegans Hypothetical pr...    31   3.7  
AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical ...    31   3.7  

>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
            protein 1 protein.
          Length = 1427

 Score =  392 bits (965), Expect = e-109
 Identities = 202/472 (42%), Positives = 294/472 (62%), Gaps = 30/472 (6%)

Query: 737  DALEGVEGNSKLWIGKDYTNFIVKDFNNLDLPFVDLVDRNTTPRMPWHDVGLVVQGAAAR 796
            D  + ++G +KLW GKDY N+I KDF  +D+PF D +DR +TPRMPWHD+  V  GA AR
Sbjct: 977  DGDDEIDGGAKLWYGKDYVNYIAKDFVEVDMPFHDFIDRGSTPRMPWHDIHSVTFGAPAR 1036

Query: 797  DVARHFIQRWNAIKLEKARQNTNYPYLVPKTYSDIQPLGDFDKLLNIDMNNVSCQVLRSV 856
            D+ARHFIQRWNA K EK + + NYPYL+PK+Y +++    F      +M NV  QVLRS+
Sbjct: 1037 DLARHFIQRWNATKTEKLKDDKNYPYLLPKSYENVRVPRVFKTANASEMVNV--QVLRSL 1094

Query: 857  SSWSGGFLDPDTVEQSIHEAYVDTITRAQHYLYIENQFFITLSRSSVAVRNQIGEALFNR 916
            S+WSG     +  E SI  AY+  I  ++HY+YIENQFF+++  S+  V N++ + ++NR
Sbjct: 1095 SNWSGLI---NQTEDSIQMAYLSLIANSKHYIYIENQFFVSMIESN-DVTNEVCKVIYNR 1150

Query: 917  IMRAHRGGEAFRVYVVMPLLPAFEGEVGAPSGTSLHAVTHWNYQSISRSREAILTRLYEA 976
            I+RA++  + +RVY+++PLLP FEG+VGAP G+SL AV HW YQS+S+   +++ RL +A
Sbjct: 1151 IVRAYKEKDNYRVYIMIPLLPGFEGDVGAPGGSSLQAVLHWTYQSLSQGPNSLIQRL-KA 1209

Query: 977  GVSDPSEYITFHGLRTHSRLEGEPVTELIYVHSKLLIADDKTVICGSANLNDRSMLGSRD 1036
             + DP +YI    LRT+ +L  + V+EL+Y+H KLLI DD+ VI GSAN+NDRS  G+RD
Sbjct: 1210 VMPDPFKYIHVGSLRTYDQLGQKLVSELVYIHCKLLIVDDEHVIIGSANINDRSQCGNRD 1269

Query: 1037 SEIAVLLQARSLVIIYYCYQDEQFTDGTMNEQAFPCGRVAGALRK---------XXXXXX 1087
            SE+  +            Y D       M+ + F  GR A +LR                
Sbjct: 1270 SEVCCV------------YTDVVKERSVMDGKPFEAGRFAKSLRMQCMREHLGLLPDSRR 1317

Query: 1088 XXXXXXXXXVDDPCCERFYRHVWQAVSRQNTEIYEDVFHSIPTDAVHTFAQLKRYQEEHC 1147
                      DDP  + F+  VWQ+ ++ N +IYE+VF S PTD V TF + +++  +  
Sbjct: 1318 KAKFPYAVSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIP 1377

Query: 1148 QTLWHTDPALANRKIDLIQGHLVDMPLDFLCNETLTPRNTSMEGMMPTSLWT 1199
             + +   P  A  ++  ++G LVD PL+FLC   LTP  TS EG++P++++T
Sbjct: 1378 MSEY--SPQQAEERVRDLKGVLVDFPLNFLCKAVLTPGITSKEGLVPSAVFT 1427



 Score =  338 bits (830), Expect = 2e-92
 Identities = 180/404 (44%), Positives = 241/404 (59%), Gaps = 30/404 (7%)

Query: 158 SFKNTVDTEEKAERVAL-EAVPRSNSKRITKPRKRRG-------ALPRFPKKPEVMITYE 209
           +FK  V  ++  +   L E V  +N+   T  R+RR         LPRFP  P+ M+T  
Sbjct: 292 AFKKEVHMQQAVQSGILDETVNEANTSEGTPKRQRRQQRKKDRHTLPRFPMMPDSMVT-- 349

Query: 210 GIQLRMKQLEEYLYNLLNISIYRNHHETVKFLEVSNLSFISELGSKGKEGMIQKRTGSTQ 269
            ++ R + LE +L  +L+I I RNHHET +FLEVS  SF++ELG K  EG ++KR G ++
Sbjct: 350 NLEHRKELLENWLQMVLHIPINRNHHETAEFLEVSRYSFVNELGGKHTEGFVKKRPGGSR 409

Query: 270 PGQAGCNCFGLLGTVVCVRCNYFCTGLVCAKWQERWFFVKDTFFGYIRPRDGIVKGIMLF 329
                  C        CVR            W +RW  V+D+F  Y+  R   ++ ++L 
Sbjct: 410 VFLGWKQC--------CVR--------YLLPWSKRWLMVRDSFVAYMDHRTEQIRMVLLM 453

Query: 330 DQGFEVSSGMYST-GMNHGLQILNQSRQMVIKCWTKRKSKEWMNYLKTVANQSARDFTYP 388
           D+ F+V++G   T G+  GL I N   ++ +KC   + +  W   ++         +  P
Sbjct: 454 DRDFKVAAGGKETEGIPTGLIITNSQHELHLKCRRLQDTATWKYIIEQAMGGIGNTWLQP 513

Query: 389 NVHHSFXXXXXXXXXXXLVDGAEYFSAAADAMELAREEIFIADWWLSPEVYMKRPALNGN 448
           +   S             VD   Y   AAD MELAREEI+I DWWLSPE+YMKRPAL GN
Sbjct: 514 HRFSSSFPVRENCHAKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIYMKRPALEGN 573

Query: 449 YWRLDMILKRKAAQGVKIFILLYKEVEMALGINSYYSKSRL--ANDNIKVFRHPDH-AKA 505
           YWRLD ILKRKA QGVKIFILLYKE+EMALG+NS YSK  L   ++NIKV RHPDH    
Sbjct: 574 YWRLDEILKRKAEQGVKIFILLYKEMEMALGLNSIYSKRTLQGLHENIKVMRHPDHYPST 633

Query: 506 GVFFWAHHEKIVVVDQSVAFLGGIDLCYGRWDDHRHRLTDLGNI 549
           G FFWAHHEK++++DQ ++F+GG+DLC+GRWDDHRH LTDLG++
Sbjct: 634 GTFFWAHHEKLLIIDQLISFVGGVDLCFGRWDDHRHLLTDLGSV 677



 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)

Query: 33  ESLAVPESLSVIDIDKVDNKDC-DAVLAKSVPFKHIHEPPIKFNSVH--------RKVFI 83
           +SL   +S    D D++   DC  A L +S+P     +  I + S++        R  +I
Sbjct: 92  QSLDYGDSDDSSDDDEIQYCDCVAAALQQSLPGTPGRKGIIPYMSIYDTQQQARRRGYWI 151

Query: 84  PGVEIKVRFVENERSVTT--HLLNPNLYTISLQHGDFTWTIKKRYKHILNLHQQLTLYRA 141
           PGV +  + V+ ER+     H +N  LYTI L+HG F W++ + YK    L+ +L  +RA
Sbjct: 152 PGVPVNAKIVKVERNTDRGIHFINTLLYTIELEHGQFRWSVIRNYKDFTLLNNRLMAHRA 211

Query: 142 SLNIPFPTKAHKSR 155
                 P K  + R
Sbjct: 212 REQFMAPIKRTQER 225


>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
            protein.
          Length = 1427

 Score =  392 bits (965), Expect = e-109
 Identities = 202/472 (42%), Positives = 294/472 (62%), Gaps = 30/472 (6%)

Query: 737  DALEGVEGNSKLWIGKDYTNFIVKDFNNLDLPFVDLVDRNTTPRMPWHDVGLVVQGAAAR 796
            D  + ++G +KLW GKDY N+I KDF  +D+PF D +DR +TPRMPWHD+  V  GA AR
Sbjct: 977  DGDDEIDGGAKLWYGKDYVNYIAKDFVEVDMPFHDFIDRGSTPRMPWHDIHSVTFGAPAR 1036

Query: 797  DVARHFIQRWNAIKLEKARQNTNYPYLVPKTYSDIQPLGDFDKLLNIDMNNVSCQVLRSV 856
            D+ARHFIQRWNA K EK + + NYPYL+PK+Y +++    F      +M NV  QVLRS+
Sbjct: 1037 DLARHFIQRWNATKTEKLKDDKNYPYLLPKSYENVRVPRVFKTANASEMVNV--QVLRSL 1094

Query: 857  SSWSGGFLDPDTVEQSIHEAYVDTITRAQHYLYIENQFFITLSRSSVAVRNQIGEALFNR 916
            S+WSG     +  E SI  AY+  I  ++HY+YIENQFF+++  S+  V N++ + ++NR
Sbjct: 1095 SNWSGLI---NQTEDSIQMAYLSLIANSKHYIYIENQFFVSMIESN-DVTNEVCKVIYNR 1150

Query: 917  IMRAHRGGEAFRVYVVMPLLPAFEGEVGAPSGTSLHAVTHWNYQSISRSREAILTRLYEA 976
            I+RA++  + +RVY+++PLLP FEG+VGAP G+SL AV HW YQS+S+   +++ RL +A
Sbjct: 1151 IVRAYKEKDNYRVYIMIPLLPGFEGDVGAPGGSSLQAVLHWTYQSLSQGPNSLIQRL-KA 1209

Query: 977  GVSDPSEYITFHGLRTHSRLEGEPVTELIYVHSKLLIADDKTVICGSANLNDRSMLGSRD 1036
             + DP +YI    LRT+ +L  + V+EL+Y+H KLLI DD+ VI GSAN+NDRS  G+RD
Sbjct: 1210 VMPDPFKYIHVGSLRTYDQLGQKLVSELVYIHCKLLIVDDEHVIIGSANINDRSQCGNRD 1269

Query: 1037 SEIAVLLQARSLVIIYYCYQDEQFTDGTMNEQAFPCGRVAGALRK---------XXXXXX 1087
            SE+  +            Y D       M+ + F  GR A +LR                
Sbjct: 1270 SEVCCV------------YTDVVKERSVMDGKPFEAGRFAKSLRMQCMREHLGLLPDSRR 1317

Query: 1088 XXXXXXXXXVDDPCCERFYRHVWQAVSRQNTEIYEDVFHSIPTDAVHTFAQLKRYQEEHC 1147
                      DDP  + F+  VWQ+ ++ N +IYE+VF S PTD V TF + +++  +  
Sbjct: 1318 KAKFPYAVSCDDPVADSFFVDVWQSTAKSNGQIYEEVFRSYPTDFVETFEEFQKWTSQIP 1377

Query: 1148 QTLWHTDPALANRKIDLIQGHLVDMPLDFLCNETLTPRNTSMEGMMPTSLWT 1199
             + +   P  A  ++  ++G LVD PL+FLC   LTP  TS EG++P++++T
Sbjct: 1378 MSEY--SPQQAEERVRDLKGVLVDFPLNFLCKAVLTPGITSKEGLVPSAVFT 1427



 Score =  338 bits (830), Expect = 2e-92
 Identities = 180/404 (44%), Positives = 241/404 (59%), Gaps = 30/404 (7%)

Query: 158 SFKNTVDTEEKAERVAL-EAVPRSNSKRITKPRKRRG-------ALPRFPKKPEVMITYE 209
           +FK  V  ++  +   L E V  +N+   T  R+RR         LPRFP  P+ M+T  
Sbjct: 292 AFKKEVHMQQAVQSGILDETVNEANTSEGTPKRQRRQQRKKDRHTLPRFPMMPDSMVT-- 349

Query: 210 GIQLRMKQLEEYLYNLLNISIYRNHHETVKFLEVSNLSFISELGSKGKEGMIQKRTGSTQ 269
            ++ R + LE +L  +L+I I RNHHET +FLEVS  SF++ELG K  EG ++KR G ++
Sbjct: 350 NLEHRKELLENWLQMVLHIPINRNHHETAEFLEVSRYSFVNELGGKHTEGFVKKRPGGSR 409

Query: 270 PGQAGCNCFGLLGTVVCVRCNYFCTGLVCAKWQERWFFVKDTFFGYIRPRDGIVKGIMLF 329
                  C        CVR            W +RW  V+D+F  Y+  R   ++ ++L 
Sbjct: 410 VFLGWKQC--------CVR--------YLLPWSKRWLMVRDSFVAYMDHRTEQIRMVLLM 453

Query: 330 DQGFEVSSGMYST-GMNHGLQILNQSRQMVIKCWTKRKSKEWMNYLKTVANQSARDFTYP 388
           D+ F+V++G   T G+  GL I N   ++ +KC   + +  W   ++         +  P
Sbjct: 454 DRDFKVAAGGKETEGIPTGLIITNSQHELHLKCRRLQDTATWKYIIEQAMGGIGNTWLQP 513

Query: 389 NVHHSFXXXXXXXXXXXLVDGAEYFSAAADAMELAREEIFIADWWLSPEVYMKRPALNGN 448
           +   S             VD   Y   AAD MELAREEI+I DWWLSPE+YMKRPAL GN
Sbjct: 514 HRFSSSFPVRENCHAKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIYMKRPALEGN 573

Query: 449 YWRLDMILKRKAAQGVKIFILLYKEVEMALGINSYYSKSRL--ANDNIKVFRHPDH-AKA 505
           YWRLD ILKRKA QGVKIFILLYKE+EMALG+NS YSK  L   ++NIKV RHPDH    
Sbjct: 574 YWRLDEILKRKAEQGVKIFILLYKEMEMALGLNSIYSKRTLQGLHENIKVMRHPDHYPST 633

Query: 506 GVFFWAHHEKIVVVDQSVAFLGGIDLCYGRWDDHRHRLTDLGNI 549
           G FFWAHHEK++++DQ ++F+GG+DLC+GRWDDHRH LTDLG++
Sbjct: 634 GTFFWAHHEKLLIIDQLISFVGGVDLCFGRWDDHRHLLTDLGSV 677



 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 11/134 (8%)

Query: 33  ESLAVPESLSVIDIDKVDNKDC-DAVLAKSVPFKHIHEPPIKFNSVH--------RKVFI 83
           +SL   +S    D D++   DC  A L +S+P     +  I + S++        R  +I
Sbjct: 92  QSLDYGDSDDSSDDDEIQYCDCVAAALQQSLPGTPGRKGIIPYMSIYDTQQQARRRGYWI 151

Query: 84  PGVEIKVRFVENERSVTT--HLLNPNLYTISLQHGDFTWTIKKRYKHILNLHQQLTLYRA 141
           PGV +  + V+ ER+     H +N  LYTI L+HG F W++ + YK    L+ +L  +RA
Sbjct: 152 PGVPVNAKIVKVERNTDRGIHFINTLLYTIELEHGQFRWSVIRNYKDFTLLNNRLMAHRA 211

Query: 142 SLNIPFPTKAHKSR 155
                 P K  + R
Sbjct: 212 REQFMAPIKRTQER 225


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
            protein Y51A2D.13b protein.
          Length = 490

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)

Query: 1007 VHSKLLIADDKTVICGSANLNDRSMLGSRDSEIAVLLQ 1044
            +HSK L+AD K+   GSANL+ RS+  ++  E+ VL++
Sbjct: 181  MHSKFLVADRKSFYLGSANLDWRSL--NQKMELGVLVE 216


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
            protein Y51A2D.13a protein.
          Length = 487

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)

Query: 1007 VHSKLLIADDKTVICGSANLNDRSMLGSRDSEIAVLLQ 1044
            +HSK L+AD K+   GSANL+ RS+  ++  E+ VL++
Sbjct: 178  MHSKFLVADRKSFYLGSANLDWRSL--NQKMELGVLVE 213


>Z68161-2|CAA92297.1|  361|Caenorhabditis elegans Hypothetical
           protein F20C5.4 protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 915 NRIMRAHRGGEAFRVYVVMPLLPAFEGEVGAPSGTSLHAVTHWNYQSISRSREAILTRLY 974
           +RIMR   G + F+    + L   + GEV    G S     +  Y + SR+ + +  ++ 
Sbjct: 84  SRIMRTEMGNQTFKCAYTITLNDDYTGEVKFYYGLSKFYQNNRLYFN-SRNDQQLRGKVT 142

Query: 975 EAGVSDPSEYITFHGLR 991
           E    DP EY+  +G +
Sbjct: 143 ETDGCDPLEYVDVNGTK 159


>AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical
            protein F09G2.8 protein.
          Length = 516

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 14/95 (14%)

Query: 959  YQSISRS-REAILTRLYEAGVSDPSE-----YITFHGLRTHSRLEGEPVTELI---YVHS 1009
            Y++I R+ +  +  R+ + G S+ S+     Y+   GL     +    VT LI    +H+
Sbjct: 184  YEAIIRAGKRGVKIRIAQDGASNLSDNKESAYLVQEGLAEVREIN---VTRLIGSGIIHT 240

Query: 1010 KLLIADDKTVICGSANLNDRSMLGSRDSEIAVLLQ 1044
            K +++D  T+  GSAN++ +S+  S   E+ V+ Q
Sbjct: 241  KFILSDIATLYIGSANMDWKSL--SEVKEVGVVFQ 273


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.321    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,680,746
Number of Sequences: 27539
Number of extensions: 1199903
Number of successful extensions: 2830
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2797
Number of HSP's gapped (non-prelim): 13
length of query: 1199
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1109
effective length of database: 10,094,651
effective search space: 11194967959
effective search space used: 11194967959
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)

- SilkBase 1999-2023 -