GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000846-TA|BGIBMGA000846-PA|IPR001683|Phox-like,
IPR001736|Phospholipase D/Transphosphatidylase
         (1199 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   4.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   6.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   8.5  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 335 VSSGMY--STGMNHGLQILNQSRQMVIKCWTKRKSKEWMNYLKTVANQSARDFTYPN 389
           +S+G Y     M +G+QI N    + I  W          +LK   ++S +   YPN
Sbjct: 41  ISNGDYIEENNMPNGMQIWNDKVFITIPRWKNGVPSNLNFFLKNDESESPKLNPYPN 97


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 440 MKRPALNGNYWRLDMILKRKAAQGVKIFILLYKEVEMALGINSYYSKSRLAN 491
           MK      + W ++ IL +K  +GV  +++ +K  +  L  N++   S L N
Sbjct: 234 MKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWD--LKYNTWEPISNLIN 283


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 11/51 (21%), Positives = 25/51 (49%)

Query: 634 GDRLMIATQPDYRTDTPEIQKRNVLDKLTDRGKDIISSILFDEERNEHKFD 684
           G +  + T P+ + +  +++  ++  +L+    D I     +EE N+ K D
Sbjct: 281 GSKCSMITTPEIKKEVEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLD 331


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 150 KAHKSRRASFKNTVDTE---EKAERVALEAVPRSNSKRITKPRKRRGALPRFPKKPEVMI 206
           K   SR     N  DT+   E+ E VAL+  P +      K  +     P     P ++ 
Sbjct: 319 KDRGSREYPTSNATDTDGTKERTEEVALDRTPVTQGLLRVKKEEELQEAPSCGGGPTILT 378

Query: 207 T----YEGIQLRMKQLE 219
           T     +GI+L  +++E
Sbjct: 379 TPGLDSDGIRLPCREVE 395


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,231
Number of Sequences: 429
Number of extensions: 13839
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 4
length of query: 1199
length of database: 140,377
effective HSP length: 66
effective length of query: 1133
effective length of database: 112,063
effective search space: 126967379
effective search space used: 126967379
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)