GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000845-TA|BGIBMGA000845-PA|IPR013057|Amino acid
transporter, transmembrane
         (214 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 166 EKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGN 199
           ++F  C G+    ++FV V+Y    IF  L +G+
Sbjct: 224 DEFNECFGLQILGILFVGVIYTTYTIFLLLIFGS 257


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query: 44  LKSSLGSGILAMPMAFKNIGL 64
           L S LG G+  MPM     GL
Sbjct: 83  LSSGLGGGLSGMPMPALGFGL 103


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 33  KTSTIGAFFHLLKSSLGSGIL 53
           K +T    +H L S LG+G+L
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLL 116


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 9   ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 51
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 83   HILVSTSRDVCKATKTPSLS 102
            HIL ST  ++C   K   LS
Sbjct: 1355 HILASTELNLCCTKKKEELS 1374


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 9   ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 51
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 83   HILVSTSRDVCKATKTPSLS 102
            HIL ST  ++C   K   LS
Sbjct: 1355 HILASTELNLCCTKKKEELS 1374


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 9   ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 51
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 83   HILVSTSRDVCKATKTPSLS 102
            HIL ST  ++C   K   LS
Sbjct: 1355 HILASTELNLCCTKKKEELS 1374


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 9   ITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSG 51
           I++DRK  + EN Y       ++ + S +     L+K +   G
Sbjct: 717 ISVDRKAVIAENTYLLTLDGDIDFQPSAVLLLIDLMKKNRNLG 759



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 83   HILVSTSRDVCKATKTPSLS 102
            HIL ST  ++C   K   LS
Sbjct: 1355 HILASTELNLCCTKKKEELS 1374


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 33  KTSTIGAFFHLLKSSLGSGIL 53
           K +T    +H L S LG+G+L
Sbjct: 96  KQNTKSFIYHFLHSWLGTGLL 116


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 36  TIGAFFHLLKSSLGS 50
           T G FFH+ KS++ S
Sbjct: 291 TAGGFFHVKKSTIFS 305


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 2   PSKTQSTITLDRKDAVVENDYNPFEHRTLEH 32
           PS   + + L  K AVV    +P E    +H
Sbjct: 86  PSSDMADVLLSLKHAVVHPGQSPAEKYDQQH 116


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 25 FEHRTLEHKTSTIG 38
          F++R ++HK  T+G
Sbjct: 52 FQNRRMKHKRQTLG 65


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 172 PGVLNFTMIFVAVLYGVVGIFGYL 195
           P  L+FT     VLY  +  FGYL
Sbjct: 50  PEKLHFTFKSWKVLYTSLTSFGYL 73


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 25  FEHRTLEHKTSTIG 38
           F++R ++HK  T+G
Sbjct: 183 FQNRRMKHKRQTLG 196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,037
Number of Sequences: 317
Number of extensions: 1923
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 214
length of database: 114,650
effective HSP length: 54
effective length of query: 160
effective length of database: 97,532
effective search space: 15605120
effective search space used: 15605120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)