Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000845-TA|BGIBMGA000845-PA|IPR013057|Amino acid
transporter, transmembrane
(214 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 60 1e-09
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 47 1e-05
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 45 4e-05
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 39 0.004
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018) 36 0.019
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 33 0.24
SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02) 31 0.95
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047) 31 0.95
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 29 2.9
SB_14447| Best HMM Match : EutH (HMM E-Value=1.1) 28 6.7
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_47334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 146 IFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSV 205
+F EGI V++PVEN MA P +F VL M V +LY ++G+ GYL G GS+
Sbjct: 202 VFTYEGIGVILPVENMMAIPRRFRW---VLYAGMSLVTLLYLLMGVLGYLSCGTSCQGSI 258
Query: 206 TINLP 210
T+NLP
Sbjct: 259 TLNLP 263
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 30 LEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTS 89
L++ TS H+LK+++G G+L++P A N G++ ++ VV V +LV
Sbjct: 69 LKNPTSEWQTLTHILKANIGPGMLSLPAAMMNAGIV--ALDEVVNLDPKIWIVILLVPVI 126
Query: 90 R-DVCKATKTPSLSYT--DTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAI 146
+ + S+ T + C + + + ++H + L +
Sbjct: 127 LLSYIHSLRVLSVLSTMANICCLIGLVITFQYLGRNVHNPKLLPEFDGWAALPLFFGMVV 186
Query: 147 FAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKY 197
F EGI VV+P+EN+MA+P+ F VLN M + ++ ++G+ GYL +
Sbjct: 187 FTFEGIGVVLPLENQMARPQHF---RLVLNVGMGIILAIFYLMGVLGYLAF 234
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 154 VVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTINLP 210
+V+PVEN M P F VLN M V +LY VVG GY+ GS T+NLP
Sbjct: 134 LVLPVENMMRTPRDFTW---VLNLAMSVVVILYLVVGTMGYISCAAMCKGSFTLNLP 187
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 30 LEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLI 65
+ + T++ + HL+K +G G+ MP+A GL+
Sbjct: 99 MSNTTTSFTSLMHLIKGCVGIGVYGMPLAVAYAGLL 134
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 40 FFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 90
F ++LK+ +G+ LA+P AFK GL G + V++A I HC +++ +
Sbjct: 389 FANVLKAFIGTSYLALPFAFKQSGLALGIVALVLIATITDHCCQMIIKCKK 439
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 148 AMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTI 207
A EGI ++P+E+ M P L+ T+ ++VL G G+ G+L YGN+V VT
Sbjct: 650 AYEGIGCIIPIESGMGSNRPRF--PLYLHLTLAQLSVLLGSFGVLGFLIYGNDVPQIVTD 707
Query: 208 NL 209
L
Sbjct: 708 KL 709
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/84 (22%), Positives = 43/84 (51%)
Query: 7 STITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIP 66
S IT + + N P + E + + + F L+ + +G G+L++P AF+ G +
Sbjct: 203 SPITTISESTPLINSSTPIKAEHHERHGTILSSIFTLVSTMIGGGVLSLPFAFQQGGFVM 262
Query: 67 GSIGTVVVAVIATHCVHILVSTSR 90
S+ + V + +TH +++++ +
Sbjct: 263 SSLVLIFVLMASTHGGFLIINSKK 286
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 148 AMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTI 207
A +GI ++P+E+ MA E P L+ + ++ + G GI GYL YG V VT
Sbjct: 594 AYQGIGTLIPIESSMA--ENRHRYPLYLHLALGLLSAILGGFGITGYLVYGENVDQIVTS 651
Query: 208 NLPQ 211
LPQ
Sbjct: 652 ELPQ 655
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 12 DRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGT 71
D K+ + ++ E + TST A + + GSG +A+P A GL G++G
Sbjct: 21 DGKEKAIHSNEARQERDVNDGTTSTWRATLNTINYMEGSGFVALPYAVARGGL-AGALGF 79
Query: 72 VVVAVIATHCVHILV 86
++V +I T+ HI+V
Sbjct: 80 ILVPIIFTYTAHIMV 94
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 31 EHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 86
E++T + AFF++ +++G+GILAMP + G +I ++VA++ + IL+
Sbjct: 23 ENETHSFQAFFNIFNANMGTGILAMPYVIRLTGYWGVAI-VILVALLGNYTGKILI 77
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 158 VENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTINLP 210
+E M P +F ++NFT V ++ GI Y +G +T++LP
Sbjct: 229 IERSMKYPAEF---NAMMNFTYTLVTIIKYNYGILVYFAFGKHTEQLMTLSLP 278
>SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018)
Length = 288
Score = 36.3 bits (80), Expect = 0.019
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 15 DAVVENDYNP--FEHRTLEHKTSTIG------AFFHLLKSSLGSGILAMPMAFKNIGLIP 66
DA E+DYNP + E + G AF++L+ G+G+L +P A + G+I
Sbjct: 31 DADTESDYNPGVTDEEGDEESDAEKGGCSLWHAFWNLVNVIEGTGVLGLPYAVREGGIIV 90
Query: 67 GSIGTVVVAVIATHCVHILVSTSRDVCKATKTP 99
+G +++AVI+ + IL+ C TK P
Sbjct: 91 -VLGLIILAVISNYTGQILIG-----CLYTKDP 117
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 2 PSKTQSTITLDRKDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKN 61
P + S+I L + + +V FE + A F ++ +++G+GIL P AF
Sbjct: 278 PPSSDSSIGLRKSEYLVRRSNGNFEEA--DSGIPMFRAVFVVMNAAMGAGILNFPQAFGK 335
Query: 62 IGLIPGSIGTVVVAVIATHCVHILVSTSRDVC 93
G I ++ +V ++ ++++ ++C
Sbjct: 336 AGGITAAMSIELVMLVFITGSFVIMAYCANMC 367
>SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 703
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 140 GTSVTAIFAMEGINVVMP-VENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYG 198
G +V + MP +E M +P F V + FV V +G +G YL +
Sbjct: 155 GAAVGIVVVSYSSQPYMPAIEGSMQRPHNFNNVMNVTYIAVTFVKVFFGFIG---YLTFT 211
Query: 199 NEVMGSVTINLPQ 211
+ +T NLP+
Sbjct: 212 RDTDQVITNNLPE 224
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 146 IFAMEGINVVMPVENEMAKPEKF--LGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
+F+ G +V +E+ M KP KF + C + T+ VA +G+ L YG +
Sbjct: 347 VFSYCGHSVFPGIESSMRKPRKFKKIACTSFTSVTLCKVA-----IGLLCCLLYGPHTLP 401
Query: 204 SVTINLPQD 212
+T+N+ +
Sbjct: 402 LITLNIQSE 410
>SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02)
Length = 385
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 34 TSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIA 78
++ + A F L G GILA+P + G+I GSI +VA +A
Sbjct: 13 SAKVAAVF-LFNVLTGVGILALPSSIAKAGIISGSICLTIVAFMA 56
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 153 NVVMP-VENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTINLPQ 211
+ V P VE M P+KF P ++N + A ++G+ L++G++ VT+N+
Sbjct: 311 HAVFPGVEGSMQDPQKF---PLMMNTSFTLAAFNKVLLGLLAVLRFGDQTEQVVTVNMGS 367
Query: 212 DE 213
E
Sbjct: 368 KE 369
>SB_745| Best HMM Match : Aa_trans (HMM E-Value=0.047)
Length = 261
Score = 30.7 bits (66), Expect = 0.95
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 20/200 (10%)
Query: 26 EHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 85
E R L + A F+ + G+GILA+P + +G +P I ++ ++A + IL
Sbjct: 19 EKRPLLAGNTAWRAIFNCVNYLEGAGILAVPYTMQ-LGGLPAVIAYILFPILAGYTARIL 77
Query: 86 VST--SRDVCKATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAA----MAGVCLG 139
V D K +Y + + LR + L + +FV AA A LG
Sbjct: 78 VDCLYDDDALLREKRVRSTYQEILLECWPPAADILR-WFLCIHWFVWAASYFTAAKSLLG 136
Query: 140 G---------TSVTAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVG 190
++ A+F V +E M+ +F V+ T I A + G
Sbjct: 137 DLWPIPSVALIAIIALFTYSIAEVAPAIEGSMSDRSQF---TVVIVITYIIEATIKCSFG 193
Query: 191 IFGYLKYGNEVMGSVTINLP 210
+ L Y + V NLP
Sbjct: 194 LVAVLVYSTDTQDVVINNLP 213
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 39 AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 82
AF + +SL +G++ P+ + GLIP + T +V IAT V
Sbjct: 345 AFPTVAVTSLAAGVMPQPLITGSPGLIPVAPATPIVTPIATPVV 388
>SB_14447| Best HMM Match : EutH (HMM E-Value=1.1)
Length = 418
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 57 MAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCK 94
+A NIGL+ G G VV IA ILVS+ D K
Sbjct: 252 VAVSNIGLVSGIFGHVVSLAIAGLTGTILVSSRTDARK 289
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 4 KTQSTITLDRKDAVVENDYNPFE 26
KT++ T + K AVV YNPFE
Sbjct: 345 KTEAETTKNTKTAVVRPGYNPFE 367
>SB_47334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 42 HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSL 101
+L + L G+++MP +IGL G I T V+ + + +++ + + +
Sbjct: 22 NLCIADLFVGLMSMPFCIYDIGLRSG-IFTTVIPKMTFYFLYVFIDICFGLSSVVNLTFI 80
Query: 102 SYTDTCETVFKIGPRKLRP----YSLHVRYFVDAAMAG 135
+ TV+ I RP Y + + + AA+AG
Sbjct: 81 ALERMRATVWPIRHHSSRPQMYFYLIVAAWLIPAAIAG 118
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 30 LEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTS 89
L +++ST + + G+G LA+P A GL G++ V ++ + ++L+
Sbjct: 30 LRNRSSTWRVTMNTINYMEGTGFLALPYAVSRGGL-AGALSFAFVGILMAYTSYLLIECV 88
Query: 90 RDVCKATKTPSL--SYTDTCETVF 111
+ K+TK + SY D + +
Sbjct: 89 YE-GKSTKRKRVHTSYRDIAQAAW 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,679,403
Number of Sequences: 59808
Number of extensions: 247660
Number of successful extensions: 605
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 30
length of query: 214
length of database: 16,821,457
effective HSP length: 79
effective length of query: 135
effective length of database: 12,096,625
effective search space: 1633044375
effective search space used: 1633044375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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