Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000845-TA|BGIBMGA000845-PA|IPR013057|Amino acid
transporter, transmembrane
(214 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 78 4e-15
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 66 2e-11
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 37 0.010
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 35 0.038
AC006610-3|AAK85449.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.12
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 33 0.21
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 32 0.27
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 31 0.63
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 31 0.83
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 27 7.7
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 27 7.7
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 27 7.7
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 27 7.7
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 27 7.7
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 27 7.7
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 78.2 bits (184), Expect = 4e-15
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T +FA EG+ VV+P+EN+M +P F+ GVLN + I V ++Y VG FG+L+YGN++
Sbjct: 241 TVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILVLLVYMTVGFFGFLRYGNDIKD 300
Query: 204 SVTINLPQ 211
++T+NLPQ
Sbjct: 301 TLTLNLPQ 308
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 25 FEHRTLEHKTSTIG-AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVH 83
F R + ++ T A H++K +G+G+L++P+AFK+ G+ G I + +I +C
Sbjct: 29 FASRVRDSRSITADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTR 88
Query: 84 ILVSTSRDVCKATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSV 143
L+ + + + Y + + ++GP +R + + V+ M G V
Sbjct: 89 QLIFGQHYITFIKREQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCV 148
Query: 144 TAIFAMEGI 152
+F + +
Sbjct: 149 YFVFMADNL 157
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T ++A+EG +V+P+EN M KPE G GVL+ + V V+Y G FG+L YGN+V
Sbjct: 224 TILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQD 283
Query: 204 SVTINLPQDEM 214
S+T+NLP D +
Sbjct: 284 SITLNLPNDHL 294
Score = 44.4 bits (100), Expect = 6e-05
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 30 LEHKTSTIGAFF---HLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILV 86
LEH I + F +L+K LG+G ++P+AFK G + G + VV+ + C+ LV
Sbjct: 14 LEHYKKAISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLV 73
Query: 87 STSRDVCKATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAI 146
+ + K ++ L Y + + +R + R V++++ + LG I
Sbjct: 74 KCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYI 133
Query: 147 FAMEGINVVMP-VENEMAKPEKFLGCPGVLNFTMIFVAV 184
F + ++ ++ V N++ P + P VL ++ V++
Sbjct: 134 FVVYHLHELLEFVMNDV--PSRATLFPMVLPAFILLVSL 170
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T ++A+EG +V+P+EN M KPE G GVL+ + V V+Y G FG+L YGN+V
Sbjct: 279 TILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQD 338
Query: 204 SVTINLPQDEM 214
S+T+NLP D +
Sbjct: 339 SITLNLPNDHL 349
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 31 EHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSR 90
+ K S+ A +L+K LG+G ++P+AFK G + G + VV+ + C+ LV +
Sbjct: 73 KEKISSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAG 132
Query: 91 DVCKATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIFAME 150
+ K ++ L Y + + +R + R V++++ + LG IF +
Sbjct: 133 YLSKVNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVY 192
Query: 151 GINVVMP-VENEMAKPEKFLGCPGVLNFTMIFVAV 184
++ ++ V N++ P + P VL ++ V++
Sbjct: 193 HLHELLEFVMNDV--PSRATLFPMVLPAFILLVSL 225
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 73.3 bits (172), Expect = 1e-13
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T +FA EG+ V+MP+EN M P F+ GVLN + + V ++ V G +GYL GN+V
Sbjct: 251 TVMFAFEGVAVIMPIENRMQSPHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDVKD 310
Query: 204 SVTINLP 210
+ T+NLP
Sbjct: 311 TATLNLP 317
Score = 64.5 bits (150), Expect = 5e-11
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 18 VENDYNPFEHRT-LEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAV 76
V D + F+ R E+ + AF H++K+ LG+G+L++P+AFK+ GL G I TV++ +
Sbjct: 32 VSEDTSLFQDRLPTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICL 91
Query: 77 IATHCVHILVSTSRDVCKATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGV 136
I +C+ +V + VC + Y + ++GP ++ + V+ M
Sbjct: 92 ICLYCMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFIS 151
Query: 137 CLGGTSVTAIFAMEGI 152
LG V +F + +
Sbjct: 152 QLGFCCVYFVFMADNL 167
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 146 IFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSV 205
I++ EG +V+P+EN + P+ G GVL+ M V VLY +G FGY+ +G V GS+
Sbjct: 270 IYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGPAVQGSL 329
Query: 206 TINLP 210
T+NLP
Sbjct: 330 TLNLP 334
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 35 STIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCK 94
S + + +G G ++ ++FK GL G +V ++ + +H +V+ S+ + K
Sbjct: 64 SATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAK 123
Query: 95 ATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIFAMEGINV 154
+ SL Y + E + + R + + ++A + LG +V +FA+E +V
Sbjct: 124 SNGDQSLDYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVE--HV 181
Query: 155 VMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLK 196
+ E P F C +L M FV + ++ G++K
Sbjct: 182 IEIWEFFADSPPPFSKCVMIL---MYFVPQM--LLNFIGHMK 218
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 135 GVCLGGTSVTAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGY 194
GV L S+ I++ EG +V+P+EN + P+ G GVL+ M V V Y +G FGY
Sbjct: 233 GVSLAAGSL--IYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGY 290
Query: 195 LKYGNEVMGSVTINLP 210
+ +G +V GS+T+NLP
Sbjct: 291 IAFGPDVRGSLTLNLP 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/118 (19%), Positives = 52/118 (44%)
Query: 35 STIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCK 94
S + + +G G ++ ++FK GL G ++ ++ + +H +V+ S+ + +
Sbjct: 36 SATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQFLSE 95
Query: 95 ATKTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIFAMEGI 152
L Y + ++ + + Y + V+ + LG +V+ IFA+E I
Sbjct: 96 KKGDQKLDYGEMAKSAMENSYGWAKKYGKIAKVVVNTCLLAFQLGVITVSMIFAVEHI 153
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 58.4 bits (135), Expect = 4e-09
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 111 FKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVT---AIFAMEGINVVMPVENEMAKPEK 167
F IG + Y++ D A GT +++A EG +++P+EN++ P
Sbjct: 206 FVIGAAVIMQYTVQQPNQWDKLPAATNFTGTITMIGMSMYAFEGQTMILPIENKLDNPAA 265
Query: 168 FLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMGSVTINLPQD 212
FL GVL+ TMI +G FGY +G+ + ++T N+P++
Sbjct: 266 FLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIAPTITTNVPKE 310
Score = 44.4 bits (100), Expect = 6e-05
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 39 AFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKT 98
A L KS +G ++P A+K GL + + V+A + + HILV S+ + K +
Sbjct: 42 AVLTLSKSMFNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKSDR 101
Query: 99 PSLSYTDTCETVFKIGP-RKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIFAMEG-INVV 155
+L Y + V R LR S V YFV+ + LG SV +F + +N+V
Sbjct: 102 SALDYGHFAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLV 160
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 24 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 82
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 120 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 179
Query: 83 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 114
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 180 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 213
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 24 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 82
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 154 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 213
Query: 83 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 114
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 214 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 247
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 24 PFEH-RTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCV 82
PFE + + K +I F + + +G+ +LAMP A + GL+ G I + +A I +
Sbjct: 152 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 211
Query: 83 HILVSTSRDVCKATKTPSLS-YTDTCETVF-KIG 114
+I++ + + + + P L+ ++D C+++F +IG
Sbjct: 212 YIVIESPKRLQDLSVDPLLAEFSDVCKSLFGRIG 245
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T IFA G + + ++M P+ + C +L++ +F+ LY V +FG+ YG+ V
Sbjct: 202 TIIFAYGGHPCIPTIVHDMKTPQHYFRC-FLLSYIALFL--LYTPVSLFGFWIYGDSVSD 258
Query: 204 SVTINLPQDEM 214
S+ ++ D +
Sbjct: 259 SIISSIQNDSL 269
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 49 GSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 85
GSG++A+P A +++G + G+I +V+ +I + +L
Sbjct: 20 GSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLL 56
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.038
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 31 EHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 85
+HK + A ++ +G G++AMP+AFK GL G + + VAV + ++L
Sbjct: 41 KHKIGWVIAAIFIIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLL 95
>AC006610-3|AAK85449.1| 264|Caenorhabditis elegans Hypothetical
protein C30F12.3 protein.
Length = 264
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 134 AGVCLGGTSVTAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFG 193
AGV + GT + AIFA E P L G+ + FV+ +Y +G+FG
Sbjct: 103 AGVFIAGTVLWAIFAQRA---------EFLVPYLLLQGAGLAIGLIFFVSFMY--IGLFG 151
Query: 194 YLKYGNEVMGSVTINL-PQDE 213
K G V+GS I + P+DE
Sbjct: 152 DKKVGTTVLGSYGIPVNPRDE 172
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 37 IGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKAT 96
IGA F ++ + G G++A+ A ++GLIPG I + ++ + + L T K
Sbjct: 28 IGAIF-IIGETAGGGMIALSYALTSMGLIPGLILLSLCSIFSLYTALELCWT----WKIM 82
Query: 97 KTPSLSYTDTCETVFKIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIFAMEGINVVM 156
+ Y D C + G R +R F+ + +G +V + A + +++++
Sbjct: 83 QNRWPEYRDHCRKPY--GEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILL 140
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEV 201
T +FA G + ++++M KP F+ + +IF +LY + + GY YG+ V
Sbjct: 222 TFVFAFGGHATLPTIQHDMKKPAHFVHS---VVLAIIFCTMLYMCIAVGGYFVYGSTV 276
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 32.7 bits (71), Expect = 0.21
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 43 LLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHILVSTSRDVCKATKTPSLS 102
++ + G G++A+P A + G + G+ +V AV+ T+ IL++ + + +
Sbjct: 20 IVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTY-TGILLAENWTILQELYP---E 75
Query: 103 YTDTCETVF-KIGPRKLRPYSLHVRYFVDAAMAGVCLGGTSVTAIF--AMEGINVV 155
Y D C + +G R + P H FV +AM V GT+V + A G N++
Sbjct: 76 YRDHCRKPYPAMGLRAIGPKFAH---FV-SAMLQVTQFGTAVVFVLLAAKNGENML 127
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T +F+ G ++++M KP F ++ F +IF+ Y V + GY YG+ +
Sbjct: 209 TIMFSYGGHCAFPTIQHDMKKPHHFSRSI-IIAFIIIFI--FYLPVSMSGYFVYGSSLTD 265
Query: 204 SV 205
S+
Sbjct: 266 SI 267
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 32.3 bits (70), Expect = 0.27
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T +F++ G + ++++M +P++F L FT++ A +Y V I GYL YG+ +
Sbjct: 253 TLLFSVGGHSAFPTIQHDMKQPKEFTRSV-FLAFTIM--AFMYIPVCIMGYLVYGDSLRD 309
Query: 204 SV 205
S+
Sbjct: 310 SI 311
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 144 TAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVVGIFGYLKYGNEVMG 203
T +FA G ++++MA P +F V++ + I + ++Y V I G + YG+ ++
Sbjct: 237 TIVFAFGGHGAFPTIQHDMAMPHQF--NKSVIS-SYILITLVYLAVSITGLIAYGDSMID 293
Query: 204 SV 205
+V
Sbjct: 294 TV 295
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/65 (21%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 14 KDAVVENDYNPFEHRTLEHKTSTIGAFFHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVV 73
+++ V D + H + H S + A ++ +G+G++++P+A GLI G + ++
Sbjct: 21 ENSTVSTDSSSTYHNS--HGISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILL 78
Query: 74 VAVIA 78
++ +
Sbjct: 79 ASIFS 83
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 174 VLNFTMIFVAVLYGVVGIFGYLK-YGNEVMGSVTINLP 210
V++ ++ A +Y VG+FGY+ Y +E+ G V + P
Sbjct: 271 VVSNSINICAAMYAAVGVFGYVAFYSHELHGDVLVQFP 308
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 41 FHLLKSSLGSGILAMPMAFKNIGLIPGSIGTVVVAVIATHCVHIL 85
F+L +G +LAMP F+ G++ +I + AV+ H L
Sbjct: 56 FNLANCIIGVSVLAMPYVFQQCGILLAAIMIALCAVLTKLTCHFL 100
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 143 VTAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVV 189
VT++ + GI + KP KFLG P + T F A +GVV
Sbjct: 150 VTSLCILTGIIQAVMAIFRCDKPMKFLGAPAISAIT--FSACFFGVV 194
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 143 VTAIFAMEGINVVMPVENEMAKPEKFLGCPGVLNFTMIFVAVLYGVV 189
VT++ + GI + KP KFLG P + T F A +GVV
Sbjct: 150 VTSLCILTGIIQAVMAIFRCDKPMKFLGAPAISAIT--FSACFFGVV 194
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 11 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 40
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 11 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 40
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 11 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 40
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 11 LDRKDAVVENDYNPFEHRTLEHKTSTIGAF 40
LD+ D V +N+Y+P E L + T G F
Sbjct: 160 LDKVDVVRQNNYDPSEQDILRCRVMTTGIF 189
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,007,337
Number of Sequences: 27539
Number of extensions: 190107
Number of successful extensions: 378
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 39
length of query: 214
length of database: 12,573,161
effective HSP length: 78
effective length of query: 136
effective length of database: 10,425,119
effective search space: 1417816184
effective search space used: 1417816184
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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