SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000844-TA|BGIBMGA000844-PA|IPR013057|Amino acid
transporter, transmembrane
         (503 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.53 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   1.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   1.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   5.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   6.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   8.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.53
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 245 VFLVICFGITLYYIFKDLPVKSEATMVASVSKWPLFISTVVFAMEGIGVVMPIENEMAKP 304
           VF    +  T+YYI+  +   S      +++K+ +F ST ++      ++  IE + +K 
Sbjct: 146 VFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYT----NLLRIIEADFSKL 201

Query: 305 QHFL 308
            H L
Sbjct: 202 NHLL 205


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 430 FLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNIFIAMISLLAFFAGTFIAIQDMVNKIS 489
           ++ T   L P  +  V N  +   F +W L +N  + +I L A    T+ AI D+++   
Sbjct: 25  YVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLILLGAL---TYHAIFDLISFKD 81

Query: 490 AD 491
           +D
Sbjct: 82  SD 83


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 430 FLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNIFIAMISLLAFFAGTFIAIQDMVNKIS 489
           ++ T   L P  +  V N  +   F +W L +N  + +I L A    T+ AI D+++   
Sbjct: 25  YVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLILLGAL---TYHAIFDLISFKD 81

Query: 490 AD 491
           +D
Sbjct: 82  SD 83


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 61  EVINEKAYDPFEHRNVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLVMG--VIGNI 118
           EV+ E+ Y PF + N      T+ ++A     +           +K + + MG  ++  +
Sbjct: 162 EVLKEECYKPFVNVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGEFLLYRL 221

Query: 119 FIGFICTHCVYV 130
              ++ + C+YV
Sbjct: 222 LRCWLISKCIYV 233


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 61  EVINEKAYDPFEHRNVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLVMG--VIGNI 118
           EV+ E+ Y PF + N      T+ ++A     +           +K + + MG  ++  +
Sbjct: 162 EVLKEECYKPFINVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGEFLLYRL 221

Query: 119 FIGFICTHCVYV 130
              ++ + C+YV
Sbjct: 222 LRCWLISKCIYV 233


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 386 KDKITVRYHNITQIAIRTAAVVGSVILAAAIPNLELVI 423
           +D+  VR+ +IT+I I T  ++  V  A  +P  + ++
Sbjct: 348 EDQCDVRFRHITEITILTVQLI--VEFAKRLPGFDKLL 383


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 418 NLELVINLCGAIFLSTLGLLTPAIVDTVH 446
           N+ L+  LC   F   L    P I+ TVH
Sbjct: 67  NVHLLFLLCSGYFTVHLLFYCPFIIFTVH 95


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 221 LVPLVLMSQIRNLKWLVPFSAIANVFLV 248
           L P  L+ QIR + ++  F  IAN+ L+
Sbjct: 63  LSPFELI-QIRTINFVATFRTIANIILM 89


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 171 VRIFVDYALTCTYLAALCVYVVFIAENFKQVLDV--YAPND 209
           V  F+   L    L ++C Y  +I E  K  LD+  Y P +
Sbjct: 319 VYYFISLGLLILRLVSVCFYGSWINEESKLSLDLLSYVPRE 359


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,995
Number of Sequences: 317
Number of extensions: 4756
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 11
length of query: 503
length of database: 114,650
effective HSP length: 60
effective length of query: 443
effective length of database: 95,630
effective search space: 42364090
effective search space used: 42364090
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)

- SilkBase 1999-2023 -