Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000844-TA|BGIBMGA000844-PA|IPR013057|Amino acid
transporter, transmembrane
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 110 3e-24
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 93 4e-19
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 3e-18
SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 6e-14
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 6e-14
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 68 2e-11
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 2e-11
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 4e-10
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 4e-10
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 4e-10
SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35) 63 4e-10
SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 4e-10
SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35) 51 3e-06
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-06
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.011
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 32 1.2
SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02) 30 3.8
SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08) 30 5.0
SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 110 bits (264), Expect = 3e-24
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 8/236 (3%)
Query: 172 RIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSVQAYCALTLVPLVLMSQIR 231
RI ++ L T +Y +F+AE+ +Q D Y + L V+ + + LVP++L+S IR
Sbjct: 91 RILINIFLLITMFGFCAIYFLFVAESLQQAFDAYT-SFKLDVKLWVLIILVPVILLSFIR 149
Query: 232 NLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVASVSKW-PLFISTVVFAMEG 290
LK L S+++NV + FG + V +T+ + K PL VVF EG
Sbjct: 150 TLKILAVLSSVSNVLAL--FGTVCVLSYAGSTVHDPSTLPLTQWKTLPLAFGAVVFTYEG 207
Query: 291 IGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPK 350
IGV++P+EN MA P+ F VL M ++ G + GS+TLNLP
Sbjct: 208 IGVILPVENMMAIPRRF---RWVLYAGMSLVTLLYLLMGVLGYLSCGTSCQGSITLNLP- 263
Query: 351 DDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKITVRYHNITQIAIRTAAV 406
+ + K+++A +I TY +Q YV +++ +K ++ + IA R V
Sbjct: 264 NTPFYMSVKLIIAASIFLTYFIQFYVITSILFPFVKGRVRQTIAPLVDIAFRMLLV 319
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 93.5 bits (222), Expect = 4e-19
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 293 VVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPKDD 352
+V+P+EN M P+ F VLN+AM ++ GS TLNLP D
Sbjct: 134 LVLPVENMMRTPRDFTW---VLNLAMSVVVILYLVVGTMGYISCAAMCKGSFTLNLP-DT 189
Query: 353 VLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKITVRYHNITQIAIRTAAVVGSVIL 412
K+L+A ++ TY LQ YVP+E++ + +++ +Y + + RT+ V+ +V+L
Sbjct: 190 PFYTTLKLLIAGSMFLTYFLQFYVPVEILLPSVLKRVSKKYQTVADLGFRTSLVLVTVVL 249
Query: 413 AAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNIFIAMISLLA 472
AA +P LE VI + G++ +TL + PA +D + + ++ L K+I I +I +
Sbjct: 250 AACVPRLEDVIAVIGSLASTTLCMTFPAAMD-IASLRMSSKLTWYLLLKDIVIILIGITG 308
Query: 473 FFAGTFIAIQDMV 485
G ++++ ++
Sbjct: 309 SVTGLYMSMAKLI 321
Score = 36.3 bits (80), Expect = 0.058
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 76 VEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVL-VKT 134
+ + T++ SL HL+K +G GV MP A AGL++ + N+ +VL +
Sbjct: 99 MSNTTTSFTSLMHLIKGCVGIGVYGMPLAVAYAGLLVLPVENMM--RTPRDFTWVLNLAM 156
Query: 135 SQEVCVEAKKPSMGF---AETCGAAFEFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYV 191
S V + +MG+ A C +F P+ +++ + ++ TY V V
Sbjct: 157 SVVVILYLVVGTMGYISCAAMCKGSFTLNLPD-TPFYTTLKLLIAGSMFLTYFLQFYVPV 215
Query: 192 -VFIAENFKQVLDVYAPNDNLSVQAYCALTLVPLVLMSQIRNLKWLVP-FSAIANVFLVI 249
+ + K+V Y +L + +L LV +VL + + L+ ++ ++A+ L +
Sbjct: 216 EILLPSVLKRVSKKYQTVADLGFRT--SLVLVTVVLAACVPRLEDVIAVIGSLASTTLCM 273
Query: 250 CFGITLYYIFKDLPVKSEATMVASVSKWPLFISTVVFAMEGI-GVVMPIENEMAK 303
F + L + S+ T W L + +V + GI G V + MAK
Sbjct: 274 TFPAAM--DIASLRMSSKLT-------WYLLLKDIVIILIGITGSVTGLYMSMAK 319
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 90.2 bits (214), Expect = 3e-18
Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 210 NLSVQAYCALTL---VPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKS 266
N SV ++ L L VPL+LM+ IR ++ L P S I+N+ L+ F L Y+ K
Sbjct: 514 NSSVPSFPLLLLIPVVPLILMAFIRRVRKLGPVSFISNLALLFAFLAVLGYMLTGWTFKL 573
Query: 267 EATMVASVSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXX 326
+ S S +P+F V A +GIG ++PIE+ MA+ +H P L++A+
Sbjct: 574 NEIRLFSWSTFPVFFGQVTSAYQGIGTLIPIESSMAENRH--RYPLYLHLALGLLSAILG 631
Query: 327 XXXXXXXMTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMI 381
+ +G+ V VT LP+ +L +IL+ LAILFTY LQL+ E+I
Sbjct: 632 GFGITGYLVYGENVDQIVTSELPQ-GLLVTVVQILLCLAILFTYPLQLFPVTEII 685
>SB_27382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 76.2 bits (179), Expect = 6e-14
Identities = 96/403 (23%), Positives = 169/403 (41%), Gaps = 40/403 (9%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVKTSQE-VCVEAKKPSMGFAETC 153
G+G LA+P A GL G + F+G + + Y+L++ E + K+ + +
Sbjct: 3 GTGFLALPYAVARGGLA-GALSFAFVGILMAYTSYLLIECVYEGKSTKRKRVHTSYRDIA 61
Query: 154 GAAFEFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSV 213
AA+ P V I L +L + Y+V +A + ++DV P L+
Sbjct: 62 QAAW-------LPAGGTVSIL----LIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQ 107
Query: 214 QAYCALTLV---PLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATM 270
++ AL V P + ++++ W+ S I+N+ L+I F I L + T+
Sbjct: 108 SSWAALAGVCVFPALFCKSLKSMAWV---SCISNITLIISFIIVLISEVSNYAAWDFRTL 164
Query: 271 VASVSKWPLF-ISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXX 329
++ LF I+ +VF+ VV+ IE M F VL +
Sbjct: 165 FFWDTRGVLFSINIIVFSYSIQAVVIDIEESMTHRSRF---NWVLTMTYSAACAVKTLFA 221
Query: 330 XXXXMTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKI 389
++F + V LN+P + +++L TY L P M+ L++
Sbjct: 222 VFGFLSFKQNTNQVVILNIPHG-IPRIIVITAFVISVLSTYPL----PAHMLINTLQNGK 276
Query: 390 TVRYHNITQIA-------IRTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIV 442
N + I R+ VV +VI A IP+ L+ +L G+I + L P ++
Sbjct: 277 LGELANASDITSRLFPFFARSVLVVSTVIAAICIPHYALLTSLSGSIVSYAVCLFFPPVL 336
Query: 443 DTVHNWDRGLGFFYWKLFKNIFIAMISLLAFFAGTFIAIQDMV 485
D+G+ W++F +IF M ++L G F AI+ ++
Sbjct: 337 HLGLKLDQGMP--RWQMFADIFCIMFAILGSSLGCFAAIETII 377
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 76.2 bits (179), Expect = 6e-14
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 210 NLSVQAYCALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEAT 269
NL + + + LVP++L+S I +L+ L S +AN+ +I IT Y+ +++
Sbjct: 111 NLDPKIWIVILLVPVILLSYIHSLRVLSVLSTMANICCLIGLVITFQYLGRNVHNPKLLP 170
Query: 270 MVASVSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAM 318
+ PLF VVF EGIGVV+P+EN+MA+PQHF VLNV M
Sbjct: 171 EFDGWAALPLFFGMVVFTFEGIGVVLPLENQMARPQHF---RLVLNVGM 216
Score = 47.2 bits (107), Expect = 3e-05
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 377 PMEMIWRQLKDKITVRYHNITQIAIRTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGL 436
PME++ ++ + R+H I RT V + LA IP L I+L G+I S L L
Sbjct: 237 PMEIMQPPIRQCVGERFHGIADYGFRTLLVCVTCALALGIPQLSNFISLVGSIGSSALAL 296
Query: 437 LTPAIVDTVHNWDRGLGFFYWKLFKNIFIAMISLLAFFAGTFIAIQDMVNKISADPVLEK 496
+ P + + + + K++FI LL G + +I ++V ++ P+
Sbjct: 297 VFPITIHLLTLYSTH-QLTISVIIKDVFILAFGLLGSVVGLYTSILNIV-RVYRGPLPSH 354
Query: 497 HLNTTRS 503
N T S
Sbjct: 355 KANATIS 361
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 75 NVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLV 111
++++PTS +L H+LK+++G G+L++PAA NAG+V
Sbjct: 68 HLKNPTSEWQTLTHILKANIGPGMLSLPAAMMNAGIV 104
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 68.1 bits (159), Expect = 2e-11
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 206 APNDNLSVQAYCALTLVPL---VLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDL 262
A + S + L L+PL V M+ IR ++ L P S +AN+ L+ F L I L
Sbjct: 566 ATHGQRSAPMFPLLLLIPLPFVVAMAFIRKIRKLGPISGLANIALLAGFFGLLVQILDGL 625
Query: 263 PVKSEATMVASVSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXX 322
K +A+ +P+F + A EGIG ++PIE+ M + P L++ +
Sbjct: 626 HFKLNDVTLANWITFPIFFGQLTCAYEGIGCIIPIESGMGSNRPRF--PLYLHLTLAQLS 683
Query: 323 XXXXXXXXXXXMTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMIW 382
+ +G+ V VT L + AQ ++ + +A+LFTY LQL+ +++
Sbjct: 684 VLLGSFGVLGFLIYGNDVPQIVTDKL-TTGLFAQLVRVTLIIAVLFTYPLQLFPVIQIAE 742
Query: 383 RQLKDKITVRY-HNITQIAIRTAAVVG 408
+ +KI ++ +++ I A +G
Sbjct: 743 SLVFEKIRRKHKSHLSDIVSCPADAIG 769
Score = 47.2 bits (107), Expect = 3e-05
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 87 AHLLKSSLGSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVK 133
A++LK+ +G+ LA+P AFK +GL +G++ + I I HC +++K
Sbjct: 390 ANVLKAFIGTSYLALPFAFKQSGLALGIVALVLIATITDHCCQMIIK 436
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 68.1 bits (159), Expect = 2e-11
Identities = 68/361 (18%), Positives = 136/361 (37%), Gaps = 22/361 (6%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVKTSQEVCVEAKKPSMGFAETCG 154
G+G L +P + + G G+ + + ++C +L++ C+ ++ S G +
Sbjct: 431 GTGTLGIPYSVRMGGWA-GITTILILAWVCCFTGKLLIE-----CLYSESKSTGKIKRVY 484
Query: 155 AAF-EFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSV 213
+ E G W F V C +Y+V +A + P
Sbjct: 485 TNYPELGGAV---WPKFGNHLVSVIQVCEMFGGTIMYIVLLATLLTDLFTTCTPLRQQHW 541
Query: 214 QAYCALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVAS 273
C +PL + ++ + W S A F I +Y I + + +
Sbjct: 542 AVICTYIALPLAFVRRVSVIAWASMISVFA--FTCALTTIIIYTITQYHHMSIQNIPAFD 599
Query: 274 VSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXX 333
+K+P+ +VF+ V +E M P+ + P ++NVA
Sbjct: 600 FTKFPVGFGIIVFSYTAHAVFPGVEASMRNPRMY---PQMMNVAFVVAAIVKTSLGLLTV 656
Query: 334 MTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQL------KD 387
M FG T +VT+N+ V+ + + + +LF++ + L+V E + + D
Sbjct: 657 MVFGTTTQQAVTVNIKNSTVVNYLSNGFVIINVLFSFPINLFVITETLDSKFLRFFPHMD 716
Query: 388 KITVRYHNITQIAIRTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHN 447
+ + Y+ Q RT + +++L +P+ L + G+ + L + P +
Sbjct: 717 R-SSEYNWAWQGLTRTLVLTLALVLVLIVPHFALFVGFVGSFTGTCLCFVLPCYFNIKLK 775
Query: 448 W 448
W
Sbjct: 776 W 776
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 63.3 bits (147), Expect = 4e-10
Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 15/255 (5%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVKTSQEVCVEAKKPSMGFAETCG 154
G+G+L +P A + G GV + + ++C +LV C+ + G +
Sbjct: 125 GTGILGVPYAVRMGGWA-GVAAIVVVAWVCCFTGKLLVD-----CLYEESKRTGQRKRVR 178
Query: 155 AAF-EFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSV 213
+ + G W N + V C + +Y+V +A F +L +AP D
Sbjct: 179 ENYPDVGEATWPGWGNKI---VSVVQVCEMYGGIVMYIVLLATIFYDMLKDFAPLDIYMW 235
Query: 214 QAYCALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVAS 273
CA+ +PL+ ++++ + W+ S A + ++ I + F + +++ V
Sbjct: 236 AVACAVVALPLIFITRVSVIAWISMMSVFALLSGLLAIIIYCFTEFDRMSLRN--IPVFE 293
Query: 274 VSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXX 333
S +P+ +VF+ V +E M PQ F P ++N +
Sbjct: 294 PSTFPIGFGIIVFSYCAHAVFPGVEGSMQDPQKF---PLMMNTSFTLAAFNKVLLGLLAV 350
Query: 334 MTFGDTVHGSVTLNL 348
+ FGD VT+N+
Sbjct: 351 LRFGDQTEQVVTVNM 365
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 63.3 bits (147), Expect = 4e-10
Identities = 84/362 (23%), Positives = 153/362 (42%), Gaps = 41/362 (11%)
Query: 97 GVLAMPAAFKNAGLV-MGVIGNIFIGFICTHCVYVLVKTSQEVCVEA---KKPSMGFAET 152
GVL +P A G + VI + +G + + VL+ EV ++ K+ +AE
Sbjct: 167 GVLGIPFAVSQGGFAALAVI--VLVGLMTLYTGVVLIDCMYEVSPKSRLRKRVRGSYAEI 224
Query: 153 CGAAFEFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAEN--FKQVLDVYAPNDN 210
A W + VD+ +T + CV + + N F +
Sbjct: 225 AADA----------WGPVGGVIVDF-MTVAFCYCTCVVLFMMLGNTVFSFLKSFMTLGFG 273
Query: 211 LSVQAY--CALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPV-KSE 267
L+ + Y CA LVPLVL+ Q+ L WL S +A + L+ C I + Y ++ K
Sbjct: 274 LN-ECYLICAALLVPLVLIHQLTVLAWL---SMLAVLSLITCLFIIIGYSLQEWQSWKIH 329
Query: 268 ATMVASVSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHF--LGCPGVLNVAMXXXXXXX 325
++ +P+ I +VF+ G V IE+ M KP+ F + C +V +
Sbjct: 330 NIPDFDINNFPVAIGIIVFSYCGHSVFPGIESSMRKPRKFKKIACTSFTSVTL-----CK 384
Query: 326 XXXXXXXXMTFGDTVHGSVTLNL---PKDDVLAQAAKILMALAILFTYSLQLYVPMEMIW 382
+ +G +TLN+ K+ V+ + + + F++ L ++V E +
Sbjct: 385 VAIGLLCCLLYGPHTLPLITLNIQSEAKNVVMRSFMAVFIIVNTYFSFPLNIFVASETLD 444
Query: 383 RQLKDKITVRYHN-----ITQIAIRTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGLL 437
K+ N I ++ RT V+ + +A AIP+L L++++ G++ + + +
Sbjct: 445 LIALPKLPSCSVNKLKRAIWKLLTRTTLVLSTCGIAVAIPHLGLLMSIFGSLLGACISFI 504
Query: 438 TP 439
P
Sbjct: 505 LP 506
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 63.3 bits (147), Expect = 4e-10
Identities = 74/361 (20%), Positives = 136/361 (37%), Gaps = 22/361 (6%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFI-GFICTHCVYVLVKTSQEVCVEAKKPSMGFAETC 153
G G+L +P A + G+ V IF+ +C +LV E+ ++K +
Sbjct: 117 GMGILGIPYAVREGGIAAAVC--IFVVAIVCDVTGILLVDCLYEISPRSQKKKRIRSNYP 174
Query: 154 GAAFEFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSV 213
E G W V T A +Y++ + F Q+ + Y
Sbjct: 175 ----EVGEAV---WPGIGGKVVSVVQTIELYTAAMLYLILLTTMFSQITEKYISLSMNVW 227
Query: 214 QAYCALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVA- 272
CA+ ++P V ++++ + W+ S IA + L+ +TL Y + S +
Sbjct: 228 AVLCAVAVLPSVFITRLSLIAWM---SMIAVLALMSSIAVTLAYCILNYDRWSINNIPTF 284
Query: 273 SVSKWPLFISTVVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXX 332
+ +P+ V F+ V IE M P+++ +++ +
Sbjct: 285 DGNTFPIGFGIVTFSYCAHAVFPGIEASMKHPENY---NKMMHTSFLVSATVKTLFGAFA 341
Query: 333 XMTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKITV- 391
+TFG VT+NL AA +AL + F++ L L+V +E L
Sbjct: 342 VLTFGLVTDQVVTVNLADSLAFNTAATAFVALNVFFSFPLPLFVVIETFDGLLLPHFPYV 401
Query: 392 ----RYHNITQIAIRTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHN 447
YH + + RT V ++ ++ +P+ L++ G+ + L P I
Sbjct: 402 GRESNYHWVWLLITRTLLVTFALFISLIVPHFGLLMGFIGSFTGTCLSFCFPCIAHLKLK 461
Query: 448 W 448
W
Sbjct: 462 W 462
>SB_27863| Best HMM Match : rve (HMM E-Value=4.7e-35)
Length = 742
Score = 63.3 bits (147), Expect = 4e-10
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 27/322 (8%)
Query: 175 VDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSVQAYCALTLV---PLVLMSQIR 231
V L +L + Y+V +A + ++DV P L+ ++ AL V P + ++
Sbjct: 433 VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQSSWAALAGVCVFPALFCKSLK 489
Query: 232 NLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVASVSKWPLF-ISTVVFAMEG 290
++ W+ S I+N+ L+I F L + T+ ++ LF I+ +VF+
Sbjct: 490 SMAWV---SCISNITLIISFIAVLISELSNYATWDFRTLFFWDTRGVLFSINIIVFSYSI 546
Query: 291 IGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPK 350
VV+ IE M F VL + ++F + V LN+P
Sbjct: 547 QAVVIDIEESMTHRSRF---NWVLTMTYSASCVVKTLFAVFGFLSFKKNTNQVVILNIPH 603
Query: 351 DDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKITVRYHNITQIA-------IRT 403
+ I +++L TY VP M+ L+ N + I R+
Sbjct: 604 G-IPRIVGIIAFVISVLSTYP----VPAHMLINTLQSGRLGELANASDITSRLFPFFARS 658
Query: 404 AAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNI 463
V+ +VI A IP+ L+ +L G+I + L P ++ D+G+ W++F +I
Sbjct: 659 VLVISTVIAAICIPHYALLTSLSGSIVSYAICLFFPPVLHLGLKLDQGMP--RWQMFADI 716
Query: 464 FIAMISLLAFFAGTFIAIQDMV 485
F M +++ G F AI+ ++
Sbjct: 717 FCIMFAIVGSSLGCFAAIETII 738
>SB_27381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 63.3 bits (147), Expect = 4e-10
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 27/322 (8%)
Query: 175 VDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSVQAYCALTLV---PLVLMSQIR 231
V L +L + Y+V +A + ++DV P L+ ++ AL V P + ++
Sbjct: 1083 VSILLIINWLNLMTGYLV-VASSL--LVDVEIPGLILTQSSWAALAGVCVFPALFCKSLK 1139
Query: 232 NLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVASVSKWPLF-ISTVVFAMEG 290
++ W+ S I+N+ L+I F L + T+ ++ LF I+ +VF+
Sbjct: 1140 SMAWV---SCISNITLIISFIAVLISELSNYATWDFRTLFFWDTRGVLFSINIIVFSYSI 1196
Query: 291 IGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPK 350
VV+ IE M F VL + ++F + V LN+P
Sbjct: 1197 QAVVIDIEESMTHRSRF---NWVLTMTYSASCVVKTLFAVFGFLSFKKNTNQVVILNIPH 1253
Query: 351 DDVLAQAAKILMALAILFTYSLQLYVPMEMIWRQLKDKITVRYHNITQIA-------IRT 403
+ I +++L TY VP M+ L+ N + I R+
Sbjct: 1254 G-IPRIVGIIAFVISVLSTYP----VPAHMLINTLQSGRLGELANASDITSRLFPFFARS 1308
Query: 404 AAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNI 463
V+ +VI A IP+ L+ +L G+I + L P ++ D+G+ W++F +I
Sbjct: 1309 VLVISTVIAAICIPHYALLTSLSGSIVSYAICLFFPPVLHLGLKLDQGMP--RWQMFADI 1366
Query: 464 FIAMISLLAFFAGTFIAIQDMV 485
F M +++ G F AI+ ++
Sbjct: 1367 FCIMFAIVGSSLGCFAAIETII 1388
>SB_58414| Best HMM Match : Aa_trans (HMM E-Value=3.1e-35)
Length = 436
Score = 50.8 bits (116), Expect = 3e-06
Identities = 91/444 (20%), Positives = 178/444 (40%), Gaps = 29/444 (6%)
Query: 48 NSGFQSTLTLGSKEVINEKAYDPFEHRNV-EHPTSTMGSLAHLLKSSLGSGVLAMPAAFK 106
N G+ + G ++ I+ + + R+V + TST + + + GSG +A+P A
Sbjct: 12 NRGYTAVPGDGKEKAIHSN--EARQERDVNDGTTSTWRATLNTINYMEGSGFVALPYAVA 69
Query: 107 NAGLVMGVIGNIFIGFICTHCVYVLVKTSQEV--CVEAKKPSMGFAETCGAAFEFGPKKL 164
GL G +G I + I T+ +++V E E K+ + E A + L
Sbjct: 70 RGGLA-GALGFILVPIIFTYTAHIMVDCLYEGGRYTEKKRVRSSYEEIATAVWPPAGYML 128
Query: 165 RPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSVQAYCALTLVPL 224
+ FV F D+ LT L + + +A +D+ ++ + A ++P
Sbjct: 129 N--TLFVFSFFDH-LTSYNLVSSSL----LAGLQTPGVDISQRYWSIIIGA----VVLPT 177
Query: 225 VLMSQIRNLKWLVPFSAIANVFLVICFGITLYYIFKDLPVKS-EATMVASVSKWPLFIST 283
+ + R++ WL S +A L++ + Y F + + + + + L I+
Sbjct: 178 LFIKTFRSIAWL---SLLATAALLLALLTVIVYDFHNYKSWDFNSLLFWDLQGFLLAINI 234
Query: 284 VVFAMEGIGVVMPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGS 343
F+ V+ E M F L ++ + F
Sbjct: 235 SAFSNGIHASVISFEKSMLHKSQF---SLALAISYTSTCIIKTAFAVLGFLAFKANTSEV 291
Query: 344 VTLNLPKDDVLAQAAKILMALAILFTYSLQLYVPMEMIW-RQLKDKITVRYHNITQIAI- 401
V LN+P+ + I ++ + Y L + + + +I R++ + ++ R + I
Sbjct: 292 VILNIPQG-TMRTVVTITTVVSTMSGYPLVVQLLISIIEKRKIGEFLSARLSPLAFFVIS 350
Query: 402 RTAAVVGSVILAAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFK 461
R A VV + + A IP+ L +L G++ L L PA + D+GL W+L
Sbjct: 351 RVAIVVITTLAAICIPHFALWTSLGGSVVSYALSLFFPAALHLGLRLDQGLP--TWQLLA 408
Query: 462 NIFIAMISLLAFFAGTFIAIQDMV 485
+ F + ++ G + A++ +V
Sbjct: 409 DWFCVVFAMAGSVLGVYSAVKAIV 432
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 50.0 bits (114), Expect = 4e-06
Identities = 92/436 (21%), Positives = 165/436 (37%), Gaps = 32/436 (7%)
Query: 60 KEVINEKAYDPFEHRNVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLVMGVIGNIF 119
+E N+ D E + ST + + + G+G LA+P A G+ G +G I
Sbjct: 856 QEKANDSNKDREERDANDGTNSTWRATLNTINYMEGTGFLALPYAVSRGGIA-GALGFIL 914
Query: 120 IGFICTHCVYVLVKTSQEVC-VEAKKPSMGFAETCGAAFEFGPKKLRPWSNFVRIF---V 175
+ I + Y+ V + E +AKK G A + + V +F
Sbjct: 915 VPIILAYTAYISVDCAYEGGKYKAKKRVRSSLAEIGKAVWAPAEHIIDGLFIVSLFDTLT 974
Query: 176 DYALTCTYLAALCVYVVFIAENFKQVLDVYAPNDNLSVQAYCALTLVPLVLMSQIRNLKW 235
+ L C+ L A + + I++ + V+ +P + + R+L W
Sbjct: 975 SFNLVCSSLLA-GLQIPSISQRYWSVI--------------IGAVALPSLFIKTFRSLVW 1019
Query: 236 LVPFSAIANVFLVICFGITLYYIFKDLPVKSEATMVASVSKWPLFISTVVFAMEGIG-VV 294
L S + L++ F + Y F++ ++ LF + GI V
Sbjct: 1020 L---SLLGTASLLLAFITVIVYEFREYKSWDFRALLFWDFNGFLFSLNIALFSNGIHCAV 1076
Query: 295 MPIENEMAKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPKDDVL 354
+ IE M C +L ++ + F V LN+P+ +
Sbjct: 1077 LSIEKSMKHKSQI--CQ-LLAISYTSTSIIKTLFAVLGFLAFKANTSEVVILNIPQG-TM 1132
Query: 355 AQAAKILMALAILFTYSLQLYVPMEMIW-RQLKDKITVRYHNITQIAI-RTAAVVGSVIL 412
I ++ L YSL ++ + +I +++ + I R + I R A V+ S +
Sbjct: 1133 RTVVIITTVISTLSGYSLLSHLLISIIESKKIGEFIGSRLSSFAFFIISRFAVVIISSLT 1192
Query: 413 AAAIPNLELVINLCGAIFLSTLGLLTPAIVDTVHNWDRGLGFFYWKLFKNIFIAMISLLA 472
A IP+ L I+L I L PA + D+GL WKL + F + +++
Sbjct: 1193 AICIPHFALWISLSACIGGYVTCLFFPAALHLGLRLDQGLP--TWKLLADWFCVLFAMVG 1250
Query: 473 FFAGTFIAIQDMVNKI 488
G + A+ +V +I
Sbjct: 1251 SVFGFYSAVVPVVLQI 1266
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 47 SNSGFQSTLTLGSKEVINEKAYDPFEHRNVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFK 106
++ G S +T S+ + P + + E + + S+ L+ + +G GVL++P AF+
Sbjct: 197 TDMGETSPITTISESTPLINSSTPIKAEHHERHGTILSSIFTLVSTMIGGGVLSLPFAFQ 256
Query: 107 NAGLVMGVIGNIFIGFICTHCVYVLVKTSQEVC 139
G VM + IF+ TH ++++ S++ C
Sbjct: 257 QGGFVMSSLVLIFVLMASTHGGFLII-NSKKYC 288
>SB_54782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 38.7 bits (86), Expect = 0.011
Identities = 81/391 (20%), Positives = 150/391 (38%), Gaps = 39/391 (9%)
Query: 66 KAYDPFEHRNVEHPTSTMGSLAHLLKSSLGSGVLAMPAAFKNAGLVMGVIGNIFIGFICT 125
KA E E+ T + + ++ +++G+G+LAMP + G GV I + +
Sbjct: 12 KAKSIEEIHKEENETHSFQAFFNIFNANMGTGILAMPYVIRLTG-YWGVAIVILVALLGN 70
Query: 126 HCVYVLVKTSQEVCVEAKKPSMGFAETCGAAFEFGPKKLRPWSNFVRIFVDYALTCTYLA 185
+ +L+ E E +A+ G A F PK R + F ++ CT
Sbjct: 71 YTGKILIHCLHENTPEGHFNKFTYAD-LGEA--FWPKYGRLMVHITNFFEQFS-HCTLFL 126
Query: 186 ALCVYVVFIAENFKQVLDVYAPNDNLSVQAY-C--ALTLVPLVLMSQIRNLKWLVPFSAI 242
+C V+ F P+ +S + C + +VP + ++++ + + I
Sbjct: 127 IMCGTVMH--HTF--------PDSGISESLWICIVSFAVVPCAFVRTMKHISHISILTVI 176
Query: 243 ANVFLVIC-FGITLYYIFKDLPVKSEATMVASVSKWPLFISTVVFAMEGIGVVMPIENEM 301
++ C G +LY+ D + + + I TV F+ + IE M
Sbjct: 177 VSMGSSTCVLGYSLYH-HDDWKTHNLTSFNFRHMSIAMGIVTVTFS--STAYLPAIERSM 233
Query: 302 AKPQHFLGCPGVLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPKD------DVLA 355
P F ++N FG +TL+LP D L
Sbjct: 234 KYPAEF---NAMMNFTYTLVTIIKYNYGILVYFAFGKHTEQLMTLSLPLGPFRTALDFLV 290
Query: 356 QAAKILMALAILFT----YSLQLYVPMEMIWRQLKDKITVRYHNIT-QIAIRTAAVVGSV 410
+L + +FT + QL +P + R++ D+ Y+ T ++ R VV S+
Sbjct: 291 IITALLFYVVPMFTLYDIFENQLDIP---LLRKVGDQPLKCYNGCTPKLVFRFGFVVVSM 347
Query: 411 ILAAAIPNLELVINLCGAIFLSTLGLLTPAI 441
++A +P+ L++ G S L + P +
Sbjct: 348 VVAIFVPHFGLLMAFVGGFTGSILVYIFPCM 378
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 313 VLNVAMXXXXXXXXXXXXXXXMTFGDTVHGSVTLNLPKDDVLAQAAKILMALAILFTYSL 372
V +AM +TFG + +N +DV+ A++ +AL ++ T++
Sbjct: 498 VCTIAMVLCCTAYSVTACFGFLTFGAKCKSDILMNYSSNDVMVNIARVAIALVVISTFAS 557
Query: 373 QLY---VPMEMIWRQLKDKITVRYHNIT---QIAIRTAAVVG-SVILAAAIPNLELVINL 425
+ +E +W ++T+ I + ++T VG ++ +A A+ ++ VI++
Sbjct: 558 VHFSGRSAVEGLWLTAW-RMTLYEAEINARKRRVVQTVLWVGFTLFIAVAVSDISYVISI 616
Query: 426 CGAI 429
G +
Sbjct: 617 IGGL 620
>SB_54489| Best HMM Match : Aa_trans (HMM E-Value=0.02)
Length = 385
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVK--TSQEVCVEAKKPSMGFAET 152
G G+LA+P++ AG++ G I + F+ L++ ++ V +G +T
Sbjct: 27 GVGILALPSSIAKAGIISGSICLTIVAFMAFVSATFLIEVLSTANAWVRFHPIHIGKGQT 86
Query: 153 CGAAF-EFGPK 162
AF EFG K
Sbjct: 87 KACAFKEFGEK 97
>SB_27864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 95 GSGVLAMPAAFKNAGLVMGVIGNIFIGFICTHCVYVLVKTSQE 137
G+G LA+P A GL G + F+G + + Y+L++ E
Sbjct: 49 GTGFLALPYAVSRGGLA-GALSFAFVGILMAYTSYLLIECVYE 90
>SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08)
Length = 1420
Score = 29.9 bits (64), Expect = 5.0
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Query: 89 LLKSSLGSGVLAMPAAFKNAGLVM-GVIGNIFIGFICTHCVYVLVKTSQEVCVEAKKPSM 147
+L + SGV+ PA N GLV + F+ + + ++KTS + + A K +
Sbjct: 1174 ILYENTTSGVV--PAKGPNGGLVFCNATASYFMSY------HTILKTSDDF-ISALKNAR 1224
Query: 148 GFAETCGAAFEFGPKKLRPWSNFVRIFVDYALTCTYLAALCVYVVFIAENFKQVLDVYAP 207
A+ A K+ P+S F + Y T +Y IA F V+
Sbjct: 1225 EIADNMTTALGDPDIKVFPYSVFYVFYEQYLTAATNAWKNLLYC--IAAVF--VVTFLLM 1280
Query: 208 NDNLSVQAYCALTLVPLVLMSQIRNLKWLVPFSAIANVFLVICFGITLYY 257
NLS+ T+ ++ W + +AI+ V LV+ GI++ +
Sbjct: 1281 GFNLSIALIVTFTVAMIITNLLGLMYLWSISLNAISIVNLVMAVGISVEF 1330
>SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 261 DLPVKSEATMVASVSKWPLFISTVVFAMEGIGVVMPI 297
DL + + A VSKWP ++ VF M ++PI
Sbjct: 615 DLSTSILSILSAEVSKWPEWLHQAVFYMSTAAFILPI 651
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,429,883
Number of Sequences: 59808
Number of extensions: 525379
Number of successful extensions: 1397
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1354
Number of HSP's gapped (non-prelim): 30
length of query: 503
length of database: 16,821,457
effective HSP length: 85
effective length of query: 418
effective length of database: 11,737,777
effective search space: 4906390786
effective search space used: 4906390786
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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