Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000842-TA|BGIBMGA000842-PA|IPR002076|GNS1/SUR4 membrane
protein
         (215 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.11 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 165 VLIFYMISFIILFGNFYMKAYI 186
           +L+F  I+F++L G+ Y+  YI
Sbjct: 217 LLVFITINFVVLLGDLYVTLYI 238


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 103 NSGIHVLMYTYYGLSVFGPTVSQYLWWKKYLTIMQLIQFTCALILGINGIRTGCEFPLWM 162
           N+ +    Y YY   +    V   L++  Y++++     T     G  G +T  +   + 
Sbjct: 266 NTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPT---YFGKTGRKTVLKTNKYC 322

Query: 163 HYVLIFYMISFIIL 176
           +++++FY+  F+IL
Sbjct: 323 NFIILFYLSVFVIL 336


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 20/181 (11%)

Query: 51  LLEFCDTFFFILRKKDEQLTFLHVYHHSTMFSFWWIGIKWVPSGSTFLPAMVNSGIHVLM 110
           LLE  +  FF L      L FL++      F   W  +      S   P  +N  ++ L 
Sbjct: 83  LLE-ANRLFFFLTGVMASLLFLNLAKRWPKFVKDWCVVD-ATFASYGWPKGLNKKLNTLT 140

Query: 111 YTYYGLSVFGPTVSQYLWWKKYLTIMQLIQFTCALILGINGIRTGCE-FPLW---MHYVL 166
             +  +++    +S+Y W K +L    L+Q T  L+L +    T  E F  +   M +  
Sbjct: 141 VVFMLIALGEHWLSRYSWAKVFLVEHILVQ-TNKLVLALECNNTTAEGFTYFLGNMSFAH 199

Query: 167 IFYMISFIIL-------------FGNFYMKAYIAKGSKCMEVRYGQCLDDDETIAAKKLK 213
           IF ++ + I              F   Y   ++   S  +  R+GQ       +A++K+K
Sbjct: 200 IFALVEYDIFKALVLQTINLQITFIWTYNDLFVMLISTALAYRFGQITRRIAAVASEKIK 259

Query: 214 D 214
           +
Sbjct: 260 N 260


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 109 LMYTYYGLSVFGPTVSQYLWWKKYL 133
           L Y+ YG+ VFG T+ +  ++K +L
Sbjct: 149 LCYSTYGIQVFG-TMQRTSFFKTFL 172


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 162 MHYVLIFYMISFIILFG 178
           + YV++ Y++  ++L+G
Sbjct: 284 VRYVMVVYLLKNVVLYG 300


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)

Query: 129 WKKYLTIMQLIQFTC-ALIL 147
           WK Y+T++ L+ F   ALI+
Sbjct: 203 WKVYITLVALVLFVFPALII 222


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 97  FLPAMVNSGIHVLMYTY 113
           FLP +V + I VL +TY
Sbjct: 111 FLPFVVTNIIFVLFHTY 127


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.332    0.143    0.490 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,208
Number of Sequences: 317
Number of extensions: 2739
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 215
length of database: 114,650
effective HSP length: 54
effective length of query: 161
effective length of database: 97,532
effective search space: 15702652
effective search space used: 15702652
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 41 (20.6 bits)