GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000839-TA|BGIBMGA000839-PA|IPR001680|WD-40 repeat,
IPR002086|Aldehyde dehydrogenase, IPR011047|Quinonprotein alcohol
dehydrogenase-like, IPR006789|ARP2/3 complex 16 kDa subunit (p16-Arc),
IPR007190|Periodic tryptophan protein-associated region
         (746 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    31   0.15 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   1.8  
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    27   1.8  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    27   1.8  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       27   1.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   3.1  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   3.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   4.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   5.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   5.5  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   7.3  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    25   7.3  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 30.7 bits (66), Expect = 0.15
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 102 DELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEEN 161
           D L  K D TS K  + L +  N E++ D +D ++ E     ++ A+ E+N  K+ SE+N
Sbjct: 386 DRLKQKADATSSKYLIHLDSV-NREQKSD-QDRLDSE----INKKAQIEENYKKIESEKN 439

Query: 162 DKRLMYKKLGRH 173
           +     +KL  H
Sbjct: 440 EALKRQEKLIDH 451


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 4/44 (9%)

Query: 113 RKKRVRLQNEGNL---EEEFDAKDDIE-KEKEYDSDRDAEQEQN 152
           R+K+V++  E  +   EE+++ ++D E +E EY+ D   E E++
Sbjct: 459 RQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEEDEED 502



 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/62 (20%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 104 LAVKQDDTSRKKRVRLQNEGNLEE-EFDAKDDIEK-EKEYDSDRDAEQEQNNSKVNSEEN 161
           +A+   +++  K +    EG  ++ +   +++I K E++Y+ + D E E++  + +  E 
Sbjct: 439 MAMHDPESTVSKEMEALREGRQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEE 498

Query: 162 DK 163
           D+
Sbjct: 499 DE 500


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 109 DDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
           D T   +R  +Q++   E     ++D +     D D D E E + ++ NS+++D R
Sbjct: 108 DPTGEYRRKYMQSDALAEHV--KQEDRDLSSSGDGDADTETEAHATEHNSQDHDHR 161


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 109 DDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
           D T   +R  +Q++   E     ++D +     D D D E E + ++ NS+++D R
Sbjct: 108 DPTGEYRRKYMQSDALAEHV--KQEDRDLSSSGDGDADTETEAHATEHNSQDHDHR 161


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 98  SIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVN 157
           S DA  + ++  + +   R +  N   +E EFD     + + ++D D D + +  + ++ 
Sbjct: 61  SRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFDDDVGD-RLE 119

Query: 158 SEEND 162
           SEE D
Sbjct: 120 SEEED 124


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 96  EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
           E + +A E A++++   R+ R + + E   E+E   K+  EKE+     R+ EQ +   +
Sbjct: 456 ERAREAREAAIEREK-ERELREQREREQR-EKEQREKEQREKEERERQQREKEQREREQR 513

Query: 156 VNSEEND 162
               E +
Sbjct: 514 EKERERE 520



 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 96  EASIDAD---ELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQN 152
           EA+I+ +   EL  +++   R+K  R + +   EE    +   EKE+     R+ E+E+ 
Sbjct: 463 EAAIEREKERELREQREREQREKEQREKEQREKEER--ERQQREKEQREREQREKERERE 520

Query: 153 NSKVNSEENDK 163
            ++    E ++
Sbjct: 521 AARERERERER 531



 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/50 (20%), Positives = 26/50 (52%)

Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKV 156
           +++   +++R R Q E    E    + + E+E   + +R+ E+E+   ++
Sbjct: 489 EKEQREKEERERQQREKEQREREQREKEREREAARERERERERERERERM 538


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 9/32 (28%), Positives = 21/32 (65%)

Query: 132 KDDIEKEKEYDSDRDAEQEQNNSKVNSEENDK 163
           ++ +E+E+E +++ D E+   +    SEE+D+
Sbjct: 77  EEHLEEEQEEEAEADEEEADESESEESEESDE 108


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 130 DAKDDI-EKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNAD 183
           D KD   E E  +D  RD ++  NN  + S E+ +R     +  +   D + N +
Sbjct: 717 DEKDVCGENEDNFDVVRDTDRRCNNGSLRSVESAERAAKYDIFSNECSDLLENCE 771


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 6/46 (13%)

Query: 119 LQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
           LQ E  +++E DA +D E+E+E     + E+E++  +   EE+ +R
Sbjct: 953 LQKE--VKKEVDAAEDDEEEEE----EEQEEEEDEDEEGGEEHGQR 992



 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 133 DDIEKE--KEYDSDRDAEQEQNNSKVNSEENDK 163
           D ++KE  KE D+  D E+E+   +   E+ D+
Sbjct: 951 DGLQKEVKKEVDAAEDDEEEEEEEQEEEEDEDE 983


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 97  ASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSD 144
           AS+   +   K+   +++   R + EG    E  AKDD +++ E D+D
Sbjct: 341 ASVKETQEGEKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDEDDAD 388


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 112 SRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQN-NSKVNSEENDKRLMYKKL 170
           S K +   Q EG  ++   A+ +IE EK+ D+    ++  + N ++  +E+DK  +Y+ L
Sbjct: 78  SYKSKRSAQPEGPRDQGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDDK--VYRGL 135

Query: 171 GRH 173
             +
Sbjct: 136 NNY 138


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 112 SRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQN-NSKVNSEENDKRLMYKKL 170
           S K +   Q EG  ++   A+ +IE EK+ D+    ++  + N ++  +E+DK  +Y+ L
Sbjct: 78  SYKSKRSAQPEGPRDQGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDDK--VYRGL 135

Query: 171 GRH 173
             +
Sbjct: 136 NNY 138


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,161
Number of Sequences: 2123
Number of extensions: 34039
Number of successful extensions: 108
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 81
Number of HSP's gapped (non-prelim): 27
length of query: 746
length of database: 516,269
effective HSP length: 69
effective length of query: 677
effective length of database: 369,782
effective search space: 250342414
effective search space used: 250342414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)