Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000839-TA|BGIBMGA000839-PA|IPR001680|WD-40 repeat,
IPR002086|Aldehyde dehydrogenase, IPR011047|Quinonprotein alcohol
dehydrogenase-like, IPR006789|ARP2/3 complex 16 kDa subunit (p16-Arc),
IPR007190|Periodic tryptophan protein-associated region
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 493 e-139
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 463 e-130
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 87 3e-17
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 87 5e-17
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 86 9e-17
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 86 9e-17
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 86 9e-17
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 85 1e-16
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 85 2e-16
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 85 2e-16
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 82 2e-15
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 80 5e-15
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 80 6e-15
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 79 8e-15
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 78 2e-14
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 76 8e-14
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 75 2e-13
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 74 4e-13
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 72 2e-12
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 72 2e-12
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 72 2e-12
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 71 4e-12
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 70 5e-12
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 70 7e-12
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 70 7e-12
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 69 1e-11
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 68 2e-11
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 68 2e-11
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 67 5e-11
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 66 1e-10
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 66 1e-10
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 65 1e-10
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 64 3e-10
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 63 6e-10
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 62 1e-09
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 62 1e-09
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 62 2e-09
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 62 2e-09
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 61 3e-09
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 59 9e-09
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 59 9e-09
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 58 2e-08
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 58 2e-08
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 57 4e-08
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 57 5e-08
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 56 9e-08
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 56 9e-08
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 56 9e-08
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 56 1e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 55 1e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 55 1e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 55 1e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 55 1e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 55 1e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 55 2e-07
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 55 2e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 54 3e-07
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 54 3e-07
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 54 3e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 3e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 3e-07
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 53 6e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 52 1e-06
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 52 1e-06
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 52 1e-06
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 52 1e-06
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 52 1e-06
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 52 1e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 52 1e-06
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 52 2e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 52 2e-06
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 2e-06
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 2e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 52 2e-06
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 51 2e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 51 2e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 51 2e-06
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 51 3e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 51 3e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 50 4e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 50 4e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 50 4e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 50 6e-06
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 50 6e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 7e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 7e-06
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 49 1e-05
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 49 1e-05
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 49 1e-05
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 48 2e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 48 2e-05
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 48 2e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 48 3e-05
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 47 4e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 47 5e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 5e-05
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 46 9e-05
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 46 9e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 45 2e-04
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 45 2e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 45 2e-04
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 45 2e-04
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 45 2e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 44 3e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 3e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 3e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 3e-04
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 44 3e-04
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 44 4e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 4e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 44 5e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 43 6e-04
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 43 6e-04
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 43 6e-04
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 42 0.001
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 42 0.001
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 42 0.001
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 42 0.001
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 0.001
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 42 0.001
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 42 0.001
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 42 0.001
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 42 0.002
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 42 0.002
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 42 0.002
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 42 0.002
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 0.002
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 42 0.002
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 41 0.003
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 41 0.003
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 41 0.003
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 41 0.003
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 41 0.003
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 41 0.003
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 41 0.003
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 40 0.005
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.005
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 40 0.005
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 40 0.006
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 40 0.006
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 40 0.006
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 40 0.008
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 40 0.008
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 40 0.008
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 40 0.008
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 40 0.008
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 40 0.008
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 39 0.011
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 39 0.011
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 39 0.011
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 39 0.011
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 39 0.011
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 39 0.011
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.011
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.014
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 39 0.014
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 39 0.014
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 38 0.018
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.018
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.018
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 38 0.018
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 38 0.024
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 38 0.032
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 37 0.043
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 37 0.043
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 37 0.043
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 37 0.043
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 37 0.056
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 37 0.056
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 37 0.056
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 37 0.056
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 37 0.056
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 37 0.056
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 37 0.056
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 36 0.074
At4g21180.1 68417.m03063 DNAJ heat shock N-terminal domain-conta... 36 0.074
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 36 0.074
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 36 0.074
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 36 0.074
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 36 0.098
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 36 0.098
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 36 0.098
At2g22795.1 68415.m02704 expressed protein 36 0.098
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 36 0.098
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 36 0.13
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 36 0.13
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 36 0.13
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.13
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 35 0.17
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 35 0.17
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 35 0.17
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 35 0.17
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 35 0.17
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 35 0.17
At5g64910.1 68418.m08165 expressed protein ; expression support... 35 0.23
At5g53800.1 68418.m06685 expressed protein 35 0.23
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 35 0.23
At3g51880.2 68416.m05690 high mobility group protein alpha (HMGa... 35 0.23
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta... 35 0.23
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 35 0.23
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 34 0.30
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 34 0.30
At3g29075.1 68416.m03637 glycine-rich protein 34 0.30
At3g15600.1 68416.m01976 hypothetical protein low similarity to ... 34 0.30
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 34 0.30
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 34 0.30
At3g28770.1 68416.m03591 expressed protein 34 0.40
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 34 0.40
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.40
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 33 0.52
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 33 0.52
At5g03710.1 68418.m00331 hypothetical protein 33 0.52
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 33 0.52
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.52
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 33 0.52
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 33 0.52
At3g54710.1 68416.m06053 expressed protein 33 0.52
At3g25840.1 68416.m03219 protein kinase family protein contains ... 33 0.52
At2g30280.1 68415.m03686 expressed protein 33 0.52
At5g60030.1 68418.m07527 expressed protein 33 0.69
At5g55820.1 68418.m06956 expressed protein 33 0.69
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.69
At5g51130.1 68418.m06340 expressed protein contains similarity t... 33 0.69
At4g33740.2 68417.m04791 expressed protein 33 0.69
At4g33740.1 68417.m04790 expressed protein 33 0.69
At4g04635.1 68417.m00678 hypothetical protein 33 0.69
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 33 0.69
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 33 0.69
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 33 0.69
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 33 0.92
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 33 0.92
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 33 0.92
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 33 0.92
At5g16030.1 68418.m01874 expressed protein 33 0.92
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 33 0.92
At5g07170.1 68418.m00817 hypothetical protein 33 0.92
At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)... 33 0.92
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 33 0.92
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.92
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 33 0.92
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 33 0.92
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 32 1.2
At5g12230.1 68418.m01435 expressed protein 32 1.2
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 32 1.2
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 32 1.6
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 32 1.6
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 32 1.6
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 32 1.6
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 32 1.6
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 32 1.6
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 32 1.6
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 31 2.1
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 31 2.1
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 2.1
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 31 2.1
At4g33530.1 68417.m04765 potassium transporter family protein si... 31 2.1
At4g02810.1 68417.m00381 expressed protein 31 2.1
At3g56570.1 68416.m06290 SET domain-containing protein low simil... 31 2.1
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 31 2.1
At2g33480.1 68415.m04104 no apical meristem (NAM) family protein... 31 2.1
At2g12875.1 68415.m01402 hypothetical protein 31 2.1
At2g07770.1 68415.m01005 hypothetical protein low similarity to ... 31 2.1
At1g29730.1 68414.m03634 leucine-rich repeat transmembrane prote... 31 2.1
At1g18800.1 68414.m02343 nucleosome assembly protein (NAP) famil... 31 2.1
At5g16500.1 68418.m01928 protein kinase family protein contains ... 31 2.8
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 31 2.8
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 31 2.8
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 2.8
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 31 2.8
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 31 2.8
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 31 2.8
At5g61560.1 68418.m07725 protein kinase family protein contains ... 31 3.7
At5g55430.1 68418.m06905 hypothetical protein 31 3.7
At5g47690.1 68418.m05887 expressed protein 31 3.7
At5g22090.1 68418.m02572 expressed protein 31 3.7
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 31 3.7
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 31 3.7
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 31 3.7
At5g02520.1 68418.m00186 expressed protein 31 3.7
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 31 3.7
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 31 3.7
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 31 3.7
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 31 3.7
At3g14670.1 68416.m01856 hypothetical protein 31 3.7
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 31 3.7
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 31 3.7
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 31 3.7
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 31 3.7
At1g11440.1 68414.m01314 expressed protein 31 3.7
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 30 4.9
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 30 4.9
At5g40450.1 68418.m04905 expressed protein 30 4.9
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 30 4.9
At3g44850.1 68416.m04832 protein kinase-related contains eukaryo... 30 4.9
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 30 4.9
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 30 4.9
At3g01780.1 68416.m00118 expressed protein est hit, 30 4.9
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 30 4.9
At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly ident... 30 4.9
At1g77180.1 68414.m08991 chromatin protein family contains Pfam ... 30 4.9
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 30 4.9
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 30 4.9
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 30 6.5
At5g27860.1 68418.m03342 expressed protein 30 6.5
At5g22310.1 68418.m02603 expressed protein 30 6.5
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 30 6.5
At4g36400.2 68417.m05172 FAD linked oxidase family protein low s... 30 6.5
At4g36400.1 68417.m05171 FAD linked oxidase family protein low s... 30 6.5
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 6.5
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 30 6.5
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 30 6.5
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 30 6.5
At3g29310.1 68416.m03680 calmodulin-binding protein-related 30 6.5
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 30 6.5
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 30 6.5
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 30 6.5
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 30 6.5
At1g75190.1 68414.m08735 expressed protein 30 6.5
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 30 6.5
At1g69060.1 68414.m07902 expressed protein 30 6.5
At1g56660.1 68414.m06516 expressed protein 30 6.5
At1g47300.1 68414.m05237 F-box family protein similar to hypothe... 30 6.5
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 30 6.5
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 30 6.5
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 30 6.5
At1g10720.1 68414.m01221 BSD domain-containing protein contains ... 30 6.5
At1g08340.1 68414.m00922 rac GTPase activating protein, putative... 30 6.5
At5g63740.1 68418.m08000 zinc finger protein-related 29 8.5
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 29 8.5
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 29 8.5
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 29 8.5
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 8.5
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 29 8.5
At5g04520.1 68418.m00452 expressed protein ; expression supporte... 29 8.5
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 29 8.5
At4g14700.1 68417.m02259 replication control protein, putative s... 29 8.5
At4g03565.1 68417.m00490 expressed protein 29 8.5
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 29 8.5
At3g02930.1 68416.m00288 expressed protein ; expression support... 29 8.5
At2g24990.1 68415.m02988 RIO1 family protein similar to extragen... 29 8.5
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 29 8.5
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 29 8.5
At1g67230.1 68414.m07652 expressed protein 29 8.5
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 29 8.5
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 29 8.5
At1g07650.1 68414.m00821 leucine-rich repeat transmembrane prote... 29 8.5
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 493 bits (1216), Expect = e-139
Identities = 271/727 (37%), Positives = 406/727 (55%), Gaps = 29/727 (3%)
Query: 13 PFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITM--YSLSGHTDK 70
PF R F + D+V L+WS S L VGS+D ++ V L+ + + GH D
Sbjct: 130 PFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKPFLFLGHRDS 189
Query: 71 IIGVFF-----ERKSLDLITVSRNGQLCLW---EASIDADELAVKQDDTSRKKRVRLQNE 122
++G FF K T++R+G + W E + DE + +E
Sbjct: 190 VVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPSPVTPDRADE 249
Query: 123 GNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNA 182
+E +++K KEYD + E ++ +++D+ M++ D A
Sbjct: 250 VMVENGGGVGTELKKRKEYDG-KGLESDEEG-----DDDDEEYMHRGKWVLLRKDGCNQA 303
Query: 183 DRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWI 242
KV TA YH+ ++V GFS+G+F L++MPD IH LSIS ++++ + G+W+
Sbjct: 304 SAKV--TACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWL 361
Query: 243 AFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG 302
F C +GQLLVW+W++E Y++KQQGH D+ C+ YSPD + TG D KVKVWN +G
Sbjct: 362 TFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG 421
Query: 303 FCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVA 362
CF+TF EH V+ + A+ +S+SLDGTVR +D RY+N++T T+P+ QF +
Sbjct: 422 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT 481
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG 422
D SG+ AG D FEIFVWS K G++ ++L GHEAPV L FSP LT LAS+SWD
Sbjct: 482 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQL-LASSSWDY 539
Query: 423 TVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEG 482
TVRLWD + E R N D L VAFRPDG+++A STLDG I F++ ++EG
Sbjct: 540 TVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Query: 483 RSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGGNSKNVCLYSVKDSVLIKKF 542
R D+ GR TD + K FTT+CYSADG IL G S+ +C+Y + D VL+++F
Sbjct: 600 RRDIAGGRVMTDRRSAANSSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRF 659
Query: 543 VVTENRSLDAVNDFVNRRNLTEFGNMALLEEREDLEGGNVNIRLPGVKTGDM---ADRNV 599
++ N SLD V DF++ + +TE G + L+++ E G ++ + G D+
Sbjct: 660 QISHNLSLDGVLDFLHSKKMTEAGPIDLIDDDNSDEEGGIDKQSRGNLGYDLPGSRPNRG 719
Query: 600 KPEVRVYCVRFSPTGESFAVAATEGLMLYSQNAGLDGT--FRPYRLEATSTPAAVRQSLR 657
+P +R + +PTG SFA A TEG++++S +D T F P L+ TP AV ++
Sbjct: 720 RPIIRTKSLSIAPTGRSFAAATTEGVLIFS----IDDTFIFDPTDLDIDVTPEAVEAAIE 775
Query: 658 DGAWGSALTGALQLAEQALIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRH 717
+ AL +++L E +LI++C+ +V DI S+ + Y +RL+ + LLE+ H
Sbjct: 776 EDEVSRALALSMRLNEDSLIKKCIFAVAPADIKAVAISVRQKYLERLMEALVDLLENCPH 835
Query: 718 VEQLLHW 724
+E +LHW
Sbjct: 836 LEFILHW 842
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 463 bits (1141), Expect = e-130
Identities = 265/717 (36%), Positives = 395/717 (55%), Gaps = 49/717 (6%)
Query: 13 PFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKII 72
PF R F + D+V L+WS S L VGS+D + T+ I + G+T+K +
Sbjct: 130 PFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARAFTIARDGYIFSW---GYTEKDV 186
Query: 73 GVFFERKSLDLITVSRNGQLCLWEASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAK 132
+ + S D R V ++N G + E
Sbjct: 187 KM---------------------DESEDGHSEPPSPVTPDRADEVMVENGGGVGTE---- 221
Query: 133 DDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQ 192
++K KEYD + E ++ +++D+ M++ D A KV TA
Sbjct: 222 --LKKRKEYDG-KGLESDE-----EGDDDDEEYMHRGKWVLLRKDGCNQASAKV--TACD 271
Query: 193 YHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQL 252
YH+ ++V GFS+G+F L++MPD IH LSIS ++++ + G+W+ F C +GQL
Sbjct: 272 YHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLTFGCAKLGQL 331
Query: 253 LVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHK 312
LVW+W++E Y++KQQGH D+ C+ YSPD + TG D KVKVWN +G CF+TF EH
Sbjct: 332 LVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHT 391
Query: 313 ATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA 372
V+ + A+ +S+SLDGTVR +D RY+N++T T+P+ QF + D SG+ A
Sbjct: 392 NAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCA 451
Query: 373 GGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDR 432
G D FEIFVWS K G++ ++L GHEAPV L FSP LT LAS+SWD TVRLWD
Sbjct: 452 GTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQL-LASSSWDYTVRLWDVFAS 509
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAE 492
+ E R N D L VAFRPDG+++A STLDG I F++ ++EGR D+ GR
Sbjct: 510 KGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVM 569
Query: 493 TDLVTPQTLLKTKAFTTICYSADGTCILGGGNSKNVCLYSVKDSVLIKKFVVTENRSLDA 552
TD + K FTT+CYSADG IL G S+ +C+Y + D VL+++F ++ N SLD
Sbjct: 570 TDRRSAANSSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQISHNLSLDG 629
Query: 553 VNDFVNRRNLTEFGNMALLEEREDLEGGNVNIRLPGVKTGDM---ADRNVKPEVRVYCVR 609
V DF++ + +TE G + L+++ E G ++ + G D+ +P +R +
Sbjct: 630 VLDFLHSKKMTEAGPIDLIDDDNSDEEGGIDKQSRGNLGYDLPGSRPNRGRPIIRTKSLS 689
Query: 610 FSPTGESFAVAATEGLMLYSQNAGLDGT--FRPYRLEATSTPAAVRQSLRDGAWGSALTG 667
+PTG SFA A TEG++++S +D T F P L+ TP AV ++ + AL
Sbjct: 690 IAPTGRSFAAATTEGVLIFS----IDDTFIFDPTDLDIDVTPEAVEAAIEEDEVSRALAL 745
Query: 668 ALQLAEQALIQECLESVPTKDISLTVSSLDEDYGDRLLSTIARLLEDSRHVEQLLHW 724
+++L E +LI++C+ +V DI S+ + Y +RL+ + LLE+ H+E +LHW
Sbjct: 746 SMRLNEDSLIKKCIFAVAPADIKAVAISVRQKYLERLMEALVDLLENCPHLEFILHW 802
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 87.4 bits (207), Expect = 3e-17
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
E+ IS ++ S +I A + L +W+ ++ + GH+ C+ ++P +V
Sbjct: 71 ENGISDVAFSSDARFIVSASDD-KTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN 346
+G FD V++W+ T G C H V+ V + + VSSS DG R +D
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 347 FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGH---EAPVSS 403
+TL S V +G+F G D + +W+I K L+ GH + +SS
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 404 LAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLD 463
AFS T R+ S S D V +W+ +++ + + VA P IA +LD
Sbjct: 249 -AFSVT-NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 464 GNI 466
+
Sbjct: 307 KTV 309
Score = 84.2 bits (199), Expect = 3e-16
Identities = 59/243 (24%), Positives = 116/243 (47%), Gaps = 7/243 (2%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
++ V + + + +V+ L ++ +LI TL + ++ +P + I
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT 307
+ + +W+ + + + HS +T + ++ DG +V+ +DG ++W++ G C T
Sbjct: 134 D-ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 308 F-HEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS- 365
+ VS V S N KF + +LD T+R ++++ + +T T Q+ + S
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 252
Query: 366 -SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTV 424
+G+ +G +D + +W + KLL+ L GH V ++A PT +AS S D TV
Sbjct: 253 TNGKRIVSGSEDNC-VHMWELNSKKLLQKLEGHTETVMNVACHPT--ENLIASGSLDKTV 309
Query: 425 RLW 427
R+W
Sbjct: 310 RIW 312
Score = 73.7 bits (173), Expect = 4e-13
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVW--NTTNGFCFVTFHE---HKATVSGVTCSAN 323
H+ ++ + +S DG + + D ++ + NT N E H+ +S V S++
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 324 KKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVW 383
+F VS+S D T++ +D+ +TL + F CV + +G D + +W
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAF-CVNFNPQSNMIVSGSFDE-TVRIW 140
Query: 384 SIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD-----CIDREVQCEP 438
+ GK L+VL H PV+++ F+ + + S+S+DG R+WD C+ + E
Sbjct: 141 DVTTGKCLKVLPAHSDPVTAVDFNRD--GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE- 197
Query: 439 IRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCE 475
N V F P+G+ I V TLD + + S+ +
Sbjct: 198 ---NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 54.8 bits (126), Expect = 2e-07
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 263 VMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSA 322
V + GH ++ +A+S D +V+ D +K+W+ G T H V +
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 323 NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFV 382
VS S D TVR +D+T + + L + S + V + G + D +
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS-DPVTAVDFNRDGSLIVSSSYDGL-CRI 181
Query: 383 WSIKFGKLLEVLGGHE-APVSSLAFSPTLTSTRLASASWDGTVRLWD 428
W G ++ L E PVS + FSP + + D T+RLW+
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSP--NGKFILVGTLDNTLRLWN 226
Score = 37.1 bits (82), Expect = 0.043
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 1 MTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN-- 58
M + T + P++ + V+ + +SS RLLA S D T + +T+ + +
Sbjct: 1 MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPI 60
Query: 59 -ITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 96
+ +GH + I V F + +++ S + L LW+
Sbjct: 61 AEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD 99
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 29 CLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSR 88
C++++ S ++ GS D T +I V + + + L H+D + V F R +++ S
Sbjct: 118 CVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV--LPAHSDPVTAVDFNRDGSLIVSSSY 175
Query: 89 NGQLCLWEA 97
+G +W++
Sbjct: 176 DGLCRIWDS 184
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 86.6 bits (205), Expect = 5e-17
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 190 AVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNI 249
+V ++ E L++ G SSG+ L ++ + ++ + S++ P G+++A +
Sbjct: 12 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 71
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
L VW+ + + + +GH+ ++ + +SPDG VV+GG D VKVW+ T G F
Sbjct: 72 N-LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 130
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
H+ + + + + S D TV+ +DL + T T P +A G+
Sbjct: 131 CHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGT-TRPEATGVRAIAFHPDGQT 189
Query: 370 CAAGGQDVFEIFVW 383
G D +++ W
Sbjct: 190 LFCGLDDGLKVYSW 203
Score = 81.0 bits (191), Expect = 3e-15
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GH+ + +A++ + + V+ G G +K+W+ F H++ S V +F
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
S S D +R +D TR + S + G + +GG D + VW +
Sbjct: 65 ASGSSDTNLRVWD-TRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNV-VKVWDLTA 122
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ 447
GKLL HE P+ SL F P LA+ S D TV+ WD E+ +
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHP--LEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRA 180
Query: 448 VAFRPDGEEIAVSTLDG-NITFFEPSTCEQTGSVEGRSDLG 487
+AF PDG+ + DG + +EP C + G G S LG
Sbjct: 181 IAFHPDGQTLFCGLDDGLKVYSWEPVIC-RDGVDMGWSTLG 220
Score = 37.9 bits (84), Expect = 0.024
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPD 453
L GH +PV S+AF+ LA AS G ++LWD + ++ S+ V F P
Sbjct: 3 LCGHTSPVDSVAFNSEEVLV-LAGAS-SGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 454 GEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYS 513
GE +A + D N+ ++ + G ++ T+ +TI +S
Sbjct: 61 GEFLASGSSDTNLRVWD---TRKKGCIQTYKG-----------------HTRGISTIEFS 100
Query: 514 ADGTCILGGGNSKNVCLYSVKDSVLIKKFVVTEN--RSLD 551
DG ++ GG V ++ + L+ +F E RSLD
Sbjct: 101 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD 140
Score = 37.5 bits (83), Expect = 0.032
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 189 TAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW-IAFACP 247
+AV++H + L +G S + + I T IS+I SP G W ++
Sbjct: 53 SAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLD 112
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
N+ + VW+ + + + + + H + L + P + TG D VK W+
Sbjct: 113 NV--VKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 85.8 bits (203), Expect = 9e-17
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH+ ++C+ +S DG + + D + +W+ TN + H + +S + S++ +
Sbjct: 40 EGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHY 99
Query: 327 FVSSSLDGTVRCYDL-TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
S+S D T+R +D + Y + L + F CV + +G D I +W +
Sbjct: 100 TCSASDDCTLRIWDARSPYECLKVLRGHTNFVF-CVNFNPPSNLIVSGSFDE-TIRIWEV 157
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
K GK + ++ H P+SS+ F+ + + SAS DG+ ++WD + I S A
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFN--RDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA 215
Query: 446 LQVA-FRPDGEEIAVSTLDGNI 466
+ A F P+G+ I V+TLD +
Sbjct: 216 VSFAKFSPNGKFILVATLDSTL 237
Score = 81.0 bits (191), Expect = 3e-15
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
++ V++ + LL + L + +LIH IS ++ S + A
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASD 105
Query: 248 NIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ L +W+ +S +K +GH+ + C+ ++P +V+G FD +++W G C
Sbjct: 106 DC-TLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR 164
Query: 307 TFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSS 366
H +S V + + VS+S DG+ + +D +TL S +
Sbjct: 165 MIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPN 224
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR-LASASWDGTVR 425
G+F D + + + GK L+V GH V + + ++T+ + + S S D V
Sbjct: 225 GKFILVATLD-STLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVY 283
Query: 426 LWDCIDREVQCEPIRLNSDA-LQVAFRPDGEEIAVS 460
LWD R + + + ++DA + V+ P EI+ S
Sbjct: 284 LWDLQARNI-LQRLEGHTDAVISVSCHPVQNEISSS 318
Score = 76.6 bits (180), Expect = 6e-14
Identities = 46/198 (23%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 233 ISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDG 292
++ +PP + I + + +WE ++ + V + HS+ ++ + ++ DG +V+ DG
Sbjct: 134 VNFNPPSNLIVSGSFD-ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDG 192
Query: 293 KVKVWNTTNGFCFVTFHEHKA-TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
K+W+ G C T + K+ VS S N KF + ++LD T++ + + + T
Sbjct: 193 SCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYT 252
Query: 352 SPSLVQFSCVALDS--SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPT 409
+ F + S +G++ +G +D +++W ++ +L+ L GH V S++ P
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNC-VYLWDLQARNILQRLEGHTDAVISVSCHPV 311
Query: 410 LTSTRLASASWDGTVRLW 427
+ D T+R+W
Sbjct: 312 QNEISSSGNHLDKTIRIW 329
Score = 46.8 bits (106), Expect = 5e-05
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 307 TFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSS 366
T H A +S V S + S+S+D T+ + T Y S S +A S
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHS-SGISDLAWSSD 96
Query: 367 GEFCAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ + D + +W + + L+VL GH V + F+P S + S S+D T+R
Sbjct: 97 SHYTCSASDDC-TLRIWDARSPYECLKVLRGHTNFVFCVNFNP--PSNLIVSGSFDETIR 153
Query: 426 LWDCIDREVQC-EPIRLNSDAL-QVAFRPDGEEIAVSTLDGNITFFE--PSTCEQT 477
+W+ + +C I+ +S + V F DG I ++ DG+ ++ TC +T
Sbjct: 154 IWEV--KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Score = 37.1 bits (82), Expect = 0.043
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 13 PFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKII 72
P+ +V + + V C++++ S L+ GS D T +I V+ + + M + H+ I
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRM--IKAHSMPIS 174
Query: 73 GVFFERKSLDLITVSRNGQLCLWEA 97
V F R +++ S +G +W+A
Sbjct: 175 SVHFNRDGSLIVSASHDGSCKIWDA 199
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 85.8 bits (203), Expect = 9e-17
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 253 LVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT---NGFCFVTFH 309
++++ S Q + GHS +T + + D V+T D V++W N C T +
Sbjct: 247 VLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLN 306
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSL-VQFSCVALDSSGE 368
+H A V VT K+FVS+SLDGT YDL+ ++ S V ++ A G
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGL 366
Query: 369 FCAAG-GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
G Q V +I W +K + GH V++++FS LA+A+ DG VRLW
Sbjct: 367 ILGTGTSQSVVKI--WDVKSQANVAKFDGHTGEVTAISFSE--NGYFLATAAEDG-VRLW 421
Query: 428 DCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDL- 486
D R+++ L++DA V F P G + ++ D + + S + ++ DL
Sbjct: 422 DL--RKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKV-YQTASVKAEWNLIKTLPDLS 478
Query: 487 GSGRA 491
G+G+A
Sbjct: 479 GTGKA 483
Score = 64.1 bits (149), Expect = 3e-10
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 187 KLTAVQYHKENKLLVTGFSSGLFFLHEMP-DVNLIHTLSISEH--RISSISVSPPGDWIA 243
K+T+V++ ++ L++T + + P D N ++++H + +++V P +
Sbjct: 266 KVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFV 325
Query: 244 FACPNIGQLLVWEWQSEQYV--MKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
A + G ++ S + + ++D T A+ PDGL + TG VK+W+ +
Sbjct: 326 SASLD-GTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
Query: 302 GFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCV 361
F H V+ ++ S N F +++ DG VR +DL + RNF++ S + V
Sbjct: 385 QANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNFKSFLS---ADANSV 440
Query: 362 ALDSSGEFCAAGGQDV 377
D SG + D+
Sbjct: 441 EFDPSGSYLGIAASDI 456
Score = 29.9 bits (64), Expect = 6.5
Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 5/183 (2%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
+ TGG D +++ +G T H V+ V + +++S D TVR +
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 345 RNFR---TLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
N+ TL S + V + + ++ + D F + + G L + V
Sbjct: 297 GNYACGYTLNDHS-AEVRAVTVHPTNKYFVSASLDGTWCF-YDLSSGSCLAQVSDDSKNV 354
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVST 461
A + L + + V++WD + + + ++F +G +A +
Sbjct: 355 DYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAA 414
Query: 462 LDG 464
DG
Sbjct: 415 EDG 417
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 85.8 bits (203), Expect = 9e-17
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 253 LVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT---NGFCFVTFH 309
++++ S Q + GHS +T + + D V+T D V++W N C T +
Sbjct: 247 VLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLN 306
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSL-VQFSCVALDSSGE 368
+H A V VT K+FVS+SLDGT YDL+ ++ S V ++ A G
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGL 366
Query: 369 FCAAG-GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
G Q V +I W +K + GH V++++FS LA+A+ DG VRLW
Sbjct: 367 ILGTGTSQSVVKI--WDVKSQANVAKFDGHTGEVTAISFSE--NGYFLATAAEDG-VRLW 421
Query: 428 DCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDL- 486
D R+++ L++DA V F P G + ++ D + + S + ++ DL
Sbjct: 422 DL--RKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKV-YQTASVKAEWNLIKTLPDLS 478
Query: 487 GSGRA 491
G+G+A
Sbjct: 479 GTGKA 483
Score = 64.1 bits (149), Expect = 3e-10
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 187 KLTAVQYHKENKLLVTGFSSGLFFLHEMP-DVNLIHTLSISEH--RISSISVSPPGDWIA 243
K+T+V++ ++ L++T + + P D N ++++H + +++V P +
Sbjct: 266 KVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFV 325
Query: 244 FACPNIGQLLVWEWQSEQYV--MKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
A + G ++ S + + ++D T A+ PDGL + TG VK+W+ +
Sbjct: 326 SASLD-GTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
Query: 302 GFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCV 361
F H V+ ++ S N F +++ DG VR +DL + RNF++ S + V
Sbjct: 385 QANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNFKSFLS---ADANSV 440
Query: 362 ALDSSGEFCAAGGQDV 377
D SG + D+
Sbjct: 441 EFDPSGSYLGIAASDI 456
Score = 29.9 bits (64), Expect = 6.5
Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 5/183 (2%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
+ TGG D +++ +G T H V+ V + +++S D TVR +
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 345 RNFR---TLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
N+ TL S + V + + ++ + D F + + G L + V
Sbjct: 297 GNYACGYTLNDHS-AEVRAVTVHPTNKYFVSASLDGTWCF-YDLSSGSCLAQVSDDSKNV 354
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVST 461
A + L + + V++WD + + + ++F +G +A +
Sbjct: 355 DYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAA 414
Query: 462 LDG 464
DG
Sbjct: 415 EDG 417
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 85.4 bits (202), Expect = 1e-16
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 169 KLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDV-NLIHTLSISE 227
K +H D D + LT + ++ K+L T SG+ L EMP V N I L +
Sbjct: 240 KHAKHMALDCSNFGDDR-PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHK 298
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVV 286
R + + SP D +A A + L W+++ +++ +GH + +A+ P G ++
Sbjct: 299 ERATDVVFSPVDDCLATASADRTAKL---WKTDGTLLQTFEGHLDRLARVAFHPSGKYLG 355
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN 346
T +D ++W+ G + H +V G+ + S LD R +DL R+
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 347 FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAF 406
FS V +G A+GG+D + +W ++ K L ++ H VS + +
Sbjct: 416 ILVFQGHIKPVFS-VNFSPNGYHLASGGED-NQCRIWDLRMRKSLYIIPAHANLVSQVKY 473
Query: 407 SPTLTSTRLASASWDGTVRLW 427
P LA+AS+D V +W
Sbjct: 474 EPQ-EGYFLATASYDMKVNIW 493
Score = 79.0 bits (186), Expect = 1e-14
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 5/245 (2%)
Query: 183 DRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWI 242
D K + T V + + L T + L + D L+ T R++ ++ P G ++
Sbjct: 296 DHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYL 354
Query: 243 AFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG 302
+ L W+ + ++ Q+GHS + +A+ DG + G D +VW+ G
Sbjct: 355 GTTSYDKTWRL-WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG 413
Query: 303 FCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVA 362
+ F H V V S N S D R +DL ++ + + + +
Sbjct: 414 RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY 473
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG 422
G F A D+ ++ +WS + L++ L GHE+ V+SL T S+ +A+ S D
Sbjct: 474 EPQEGYFLATASYDM-KVNIWSGRDFSLVKSLAGHESKVASLDI--TADSSCIATVSHDR 530
Query: 423 TVRLW 427
T++LW
Sbjct: 531 TIKLW 535
Score = 36.3 bits (80), Expect = 0.074
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
++G + S + K + SL G + +++ + N + + + V + A
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATAS 317
Query: 375 QDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC-IDRE 433
D +W G LL+ GH ++ +AF P+ L + S+D T RLWD E
Sbjct: 318 ADR-TAKLWKTD-GTLLQTFEGHLDRLARVAFHPS--GKYLGTTSYDKTWRLWDINTGAE 373
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLD 463
+ + S +AF+ DG A LD
Sbjct: 374 LLLQEGHSRS-VYGIAFQQDGALAASCGLD 402
Score = 31.1 bits (67), Expect = 2.8
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 19 VFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFER 78
V K + T + +S LA S D T K+ + + + GH D++ V F
Sbjct: 293 VLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD---GTLLQTFEGHLDRLARVAFHP 349
Query: 79 KSLDLITVSRNGQLCLWEASIDADELAVKQDDTSRKKRVRLQNEGNL 125
L T S + LW+ + A EL +++ + + Q +G L
Sbjct: 350 SGKYLGTTSYDKTWRLWDINTGA-ELLLQEGHSRSVYGIAFQQDGAL 395
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 84.6 bits (200), Expect = 2e-16
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
+ +V + L+ G +SG L ++ + ++ TL+ S+ P G++ A
Sbjct: 62 IDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT 307
+ L +W+ + + + +GH+ + L ++PDG VV+GG D VKVW+ T G
Sbjct: 122 DTN-LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
F H+ + + ++ + S D TV+ +DL + + P C++ + G
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS-GGPETAGVRCLSFNPDG 239
Query: 368 EFCAAGGQDVFEIFVW 383
+ G Q+ +IF W
Sbjct: 240 KTVLCGLQESLKIFSW 255
Score = 78.6 bits (185), Expect = 1e-14
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Query: 269 HSLDMTCLAYSPDGLHV-VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
HS + CL V VTGG D KV +W ++ + H + + VT A++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALD--SSGEFCAAGGQDVFEIFVWSI 385
+ + GT++ +DL + RTLT + +C+++D GEF A+G D + +W I
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGH---RSNCISVDFHPFGEFFASGSLDT-NLKIWDI 130
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
+ + GH V+ L F+P + S D V++WD ++ E
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTP--DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 446 LQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGS 479
+ F P +A + D + F++ T E GS
Sbjct: 189 QSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 73.3 bits (172), Expect = 5e-13
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W ++ GHS + + + + V G G +K+W+ T H++
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
V +FF S SLD ++ +D+ + T + + + G + +G
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR-GVNVLRFTPDGRWVVSG 161
Query: 374 GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
G+D + VW + GKLL HE + SL F P LA+ S D TV+ WD E
Sbjct: 162 GEDNI-VKVWDLTAGKLLTEFKSHEGQIQSLDFHP--HEFLLATGSADRTVKFWDLETFE 218
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDG-NITFFEPSTC 474
+ + ++F PDG+ + + I +EP C
Sbjct: 219 LIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPIRC 260
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 84.6 bits (200), Expect = 2e-16
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
+ +V + L+ G +SG L ++ + ++ TL+ S+ P G++ A
Sbjct: 62 IDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT 307
+ L +W+ + + + +GH+ + L ++PDG VV+GG D VKVW+ T G
Sbjct: 122 DTN-LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
F H+ + + ++ + S D TV+ +DL + + P C++ + G
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS-GGPETAGVRCLSFNPDG 239
Query: 368 EFCAAGGQDVFEIFVW 383
+ G Q+ +IF W
Sbjct: 240 KTVLCGLQESLKIFSW 255
Score = 78.6 bits (185), Expect = 1e-14
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Query: 269 HSLDMTCLAYSPDGLHV-VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
HS + CL V VTGG D KV +W ++ + H + + VT A++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALD--SSGEFCAAGGQDVFEIFVWSI 385
+ + GT++ +DL + RTLT + +C+++D GEF A+G D + +W I
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGH---RSNCISVDFHPFGEFFASGSLDT-NLKIWDI 130
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
+ + GH V+ L F+P + S D V++WD ++ E
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTP--DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 446 LQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGS 479
+ F P +A + D + F++ T E GS
Sbjct: 189 QSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 73.3 bits (172), Expect = 5e-13
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 5/222 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W ++ GHS + + + + V G G +K+W+ T H++
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
V +FF S SLD ++ +D+ + T + + + G + +G
Sbjct: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR-GVNVLRFTPDGRWVVSG 161
Query: 374 GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
G+D + VW + GKLL HE + SL F P LA+ S D TV+ WD E
Sbjct: 162 GEDNI-VKVWDLTAGKLLTEFKSHEGQIQSLDFHP--HEFLLATGSADRTVKFWDLETFE 218
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDG-NITFFEPSTC 474
+ + ++F PDG+ + + I +EP C
Sbjct: 219 LIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPIRC 260
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 81.8 bits (193), Expect = 2e-15
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
H + + +S G + A + G+L +W+ + + + GH+ D+ +A+S D +V+
Sbjct: 64 HFVQDVVLSSDGQF-ALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 288 GGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANK--KFFVSSSLDGTVRCYDLT 342
D +K+WNT G C T E HK VS V S N VS+S D TV+ ++L
Sbjct: 123 ASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 343 RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVS 402
+ TL S + VA+ G CA+GG+D I +W + GK L L +
Sbjct: 182 NCKLRNTLAGHS-GYLNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLEAGSI-IH 238
Query: 403 SLAFSPTLTSTRLASASWDGTVRLWDCIDREV 434
SL FSP + A+ + ++R+WD + V
Sbjct: 239 SLCFSP---NRYWLCAATENSIRIWDLESKSV 267
Score = 62.9 bits (146), Expect = 7e-10
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 15/264 (5%)
Query: 265 KQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
+ GHS + + S DG ++G +DG++++W+ G F H V V S +
Sbjct: 58 RMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDN 117
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQF-SCVALDSSG--EFCAAGGQDVFEIF 381
+ VS+S D T++ ++ + + ++ SCV + + D +
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDK-TVK 176
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRL 441
VW+++ KL L GH ++++A SP + AS DG + LWD + + + +
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSP--DGSLCASGGKDGVILLWDLAEGK-KLYSLEA 233
Query: 442 NSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEG-RSDLGSGRAETDLVTPQT 500
S + F P+ + +T + +I ++ E VE + DL + +TD T
Sbjct: 234 GSIIHSLCFSPNRYWLCAAT-ENSIRIWD---LESKSVVEDLKVDLKAEAEKTDGST-GI 288
Query: 501 LLKTKAF--TTICYSADGTCILGG 522
KTK T++ +SADG + G
Sbjct: 289 GNKTKVIYCTSLNWSADGNTLFSG 312
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 80.2 bits (189), Expect = 5e-15
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
H + + +S G + A + G+L +W+ + + + GH+ D+ +A+S D +V+
Sbjct: 64 HFVEDVVLSSDGQF-ALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 288 GGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANK--KFFVSSSLDGTVRCYDLT 342
D +K+WNT G C T E HK VS V S N VS+S D TV+ ++L
Sbjct: 123 ASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 343 RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVS 402
+ +L S + VA+ G CA+GG+D I +W + GK L L +
Sbjct: 182 NCKLRNSLVGHS-GYLNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLEAGSI-IH 238
Query: 403 SLAFSPTLTSTRLASASWDGTVRLWDCIDREV 434
SL FSP + A+ + ++R+WD + V
Sbjct: 239 SLCFSP---NRYWLCAATENSIRIWDLESKSV 267
Score = 57.2 bits (132), Expect = 4e-08
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 13/260 (5%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GHS + + S DG ++G +DG++++W+ G F H V V S + +
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQF-SCVALDSSG--EFCAAGGQDVFEIFVWS 384
VS+S D T++ ++ + ++ SCV + + D + VW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK-TVKVWN 179
Query: 385 IKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD 444
++ KL L GH ++++A SP + AS DG + LWD + + + + S
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSP--DGSLCASGGKDGVILLWDLAEGK-KLYSLEAGSI 236
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEG-RSDLGSGRAETD-LVTPQTLL 502
+ F P+ + +T + +I ++ E VE + DL S + + V
Sbjct: 237 IHSLCFSPNRYWLCAAT-ENSIRIWD---LESKSVVEDLKVDLKSEAEKNEGGVGTGNQK 292
Query: 503 KTKAFTTICYSADGTCILGG 522
K T++ +SADG+ + G
Sbjct: 293 KVIYCTSLNWSADGSTLFSG 312
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 79.8 bits (188), Expect = 6e-15
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
+ +V + L+ G +SG L ++ + ++ TL+ S++ P G++ A
Sbjct: 155 IDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSL 214
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT 307
+ L +W+ + + + +GH+ + L ++PDG +V+GG D VKVW+ T G
Sbjct: 215 DTN-LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 273
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
F H+ + + ++ + S D TV+ +DL + + C+ + G
Sbjct: 274 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGS-GGTETTGVRCLTFNPDG 332
Query: 368 EFCAAGGQDVFEIFVW 383
+ G Q+ +IF W
Sbjct: 333 KSVLCGLQESLKIFSW 348
Score = 76.6 bits (180), Expect = 6e-14
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Query: 269 HSLDMTCLAYSPDGLHV-VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
HS + CL V VTGG D KV +W ++ + H + + VT A++
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALD--SSGEFCAAGGQDVFEIFVWSI 385
+ + GT++ +DL + RTLT + +CV+++ GEF A+G D + +W I
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGH---RSNCVSVNFHPFGEFFASGSLDT-NLKIWDI 223
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
+ + GH V+ L F+P + S D V++WD ++ E
Sbjct: 224 RKKGCIHTYKGHTRGVNVLRFTP--DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 281
Query: 446 LQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGS 479
+ F P +A + D + F++ T E GS
Sbjct: 282 QSLDFHPHEFLLATGSADKTVKFWDLETFELIGS 315
Score = 72.1 bits (169), Expect = 1e-12
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 5/222 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W ++ GHS + + + V G G +K+W+ T H++
Sbjct: 136 LWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRS 195
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
V +FF S SLD ++ +D+ + T + + + G + +G
Sbjct: 196 NCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR-GVNVLRFTPDGRWIVSG 254
Query: 374 GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
G+D + VW + GKLL HE + SL F P LA+ S D TV+ WD E
Sbjct: 255 GEDNV-VKVWDLTAGKLLHEFKSHEGKIQSLDFHP--HEFLLATGSADKTVKFWDLETFE 311
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDG-NITFFEPSTC 474
+ + + F PDG+ + + I +EP C
Sbjct: 312 LIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEPIRC 353
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 79.4 bits (187), Expect = 8e-15
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 190 AVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNI 249
+V + L++ G SSG+ L ++ + ++ + S++ P G+++A +
Sbjct: 63 SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSD- 121
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
L +W+ + + + +GHS ++ + ++PDG VV+GG D VKVW+ T G F
Sbjct: 122 ANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
H+ + + + + S D TV+ +DL + + T P + G
Sbjct: 182 FHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGS-TRPEATGVRSIKFHPDGRT 240
Query: 370 CAAGGQDVFEIFVW 383
G D +++ W
Sbjct: 241 LFCGLDDSLKVYSW 254
Score = 77.8 bits (183), Expect = 2e-14
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 6/235 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W +M GH+ + +A+ + V+ G G +K+W+ F H++
Sbjct: 42 LWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRS 101
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
S V +F S S D ++ +D+ + +T S S + G + +G
Sbjct: 102 NCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSR-GISTIRFTPDGRWVVSG 160
Query: 374 GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
G D + VW + GKLL HE P+ SL F P LA+ S D TV+ WD E
Sbjct: 161 GLDNV-VKVWDLTAGKLLHEFKFHEGPIRSLDFHP--LEFLLATGSADRTVKFWDLETFE 217
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDG-NITFFEPSTCEQTGSVEGRSDLG 487
+ + + F PDG + D + +EP C G G S LG
Sbjct: 218 LIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVYSWEPVVCHD-GVDMGWSTLG 271
Score = 66.5 bits (155), Expect = 6e-11
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 5/212 (2%)
Query: 269 HSLDMTCLAYSPDGLHV-VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
HS ++ CL+ + +TGG D KV +W ++ H + V V + +
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLV 73
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
++ + G ++ +D+ + R T S V GEF A+G D + +W I+
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTG-HRSNCSAVEFHPFGEFLASGSSDA-NLKIWDIRK 131
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ 447
++ GH +S++ F+P + S D V++WD ++ E
Sbjct: 132 KGCIQTYKGHSRGISTIRFTP--DGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRS 189
Query: 448 VAFRPDGEEIAVSTLDGNITFFEPSTCEQTGS 479
+ F P +A + D + F++ T E GS
Sbjct: 190 LDFHPLEFLLATGSADRTVKFWDLETFELIGS 221
Score = 38.3 bits (85), Expect = 0.018
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 189 TAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW-IAFACP 247
+AV++H + L +G S + ++ I T IS+I +P G W ++
Sbjct: 104 SAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLD 163
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
N+ + VW+ + + + + + H + L + P + TG D VK W+
Sbjct: 164 NV--VKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 77.8 bits (183), Expect = 2e-14
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 15/246 (6%)
Query: 253 LVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH--- 309
++++ S Q + GHS +T + + D V+T D V++W + + + H
Sbjct: 247 VLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLK 306
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT--SPSLVQFSCVALDSSG 367
+H A V VT A K+FVS+SLD T YDL+ +T S + V ++ A G
Sbjct: 307 DHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDG 366
Query: 368 EFCAAG-GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
G Q + +I W +K + GGH ++S++FS LA+A+ DG VRL
Sbjct: 367 LILGTGTAQSIVKI--WDVKSQANVAKFGGHNGEITSISFSE--NGYFLATAALDG-VRL 421
Query: 427 WDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDL 486
WD R+++ DA V F G + ++ D + F S + ++ DL
Sbjct: 422 WDL--RKLKNFRTFDFPDANSVEFDHSGSYLGIAASDIRV-FQAASVKAEWNPIKTLPDL 478
Query: 487 -GSGRA 491
G+G+A
Sbjct: 479 SGTGKA 484
Score = 63.3 bits (147), Expect = 6e-10
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
+ ++ T A+ PDGL + TG VK+W+ + F H ++ ++ S N F
Sbjct: 353 NDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLA 412
Query: 329 SSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG 388
+++LDG VR +DL + +NFRT P + V D SG + D+ S+K
Sbjct: 413 TAALDG-VRLWDLRKLKNFRTFDFPDA---NSVEFDHSGSYLGIAASDIRVFQAASVKAE 468
Query: 389 ----KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
K L L G +S+ F L S +A S D +R++ D
Sbjct: 469 WNPIKTLPDLSG-TGKATSVKFG--LDSKYIAVGSMDRNLRIFGLPD 512
Score = 38.7 bits (86), Expect = 0.014
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 10/195 (5%)
Query: 278 YSPDGLH----VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
+S D LH + TGG D +++ +G T H V+ + + +++S D
Sbjct: 226 FSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSD 285
Query: 334 GTVR---CYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGK- 389
TVR C + Y + TL S + V + ++ ++ + D F + + G
Sbjct: 286 KTVRIWGCSEDGNYTSRHTLKDHS-AEVRAVTVHATNKYFVSASLDSTWCF-YDLSSGLC 343
Query: 390 LLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVA 449
L +V E V+ A + L + + V++WD + + N + ++
Sbjct: 344 LAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSIS 403
Query: 450 FRPDGEEIAVSTLDG 464
F +G +A + LDG
Sbjct: 404 FSENGYFLATAALDG 418
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 76.2 bits (179), Expect = 8e-14
Identities = 84/351 (23%), Positives = 145/351 (41%), Gaps = 23/351 (6%)
Query: 90 GQLCLWEASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDD-IEKEKEYDSDRDAE 148
G++ L E+ + E+ V ++D + ++G E+FD DD + + + A
Sbjct: 21 GEIFLGESDV-LREIDVDEEDLPEADDDDMDDDG---EQFDENDDSVHTFTGHKGELYAL 76
Query: 149 --QEQNNSKVNSEENDKRLMYKKLGRHYIGD-AIRNADRKVKLTAVQYHKENKLLVTGFS 205
+ + V + D + K+G GD A K ++ + + + +LL +G
Sbjct: 77 ACSPTDATLVATGGGDDKAFLWKIGN---GDWAAELPGHKDSVSCLAFSYDGQLLASGGL 133
Query: 206 SGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMK 265
G+ + + L L I + P G I A L +W E Y+
Sbjct: 134 DGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH-IVLAGSEDCSLWMWNADKEAYLNM 192
Query: 266 QQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTC---SA 322
GH+L++TC ++PDG + TG D + VWN H G+TC ++
Sbjct: 193 FSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINS 252
Query: 323 NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG---EFCAAGGQDVFE 379
N +S S DG+V ++ + +L S + CV S A GG D +
Sbjct: 253 NSSLAISGSKDGSVHIVNIVTGKVVSSLNSHT-DSVECVKFSPSSATIPLAATGGMDK-K 310
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
+ +W ++ + HE V+SL + TS LA+ +GTV +WD +
Sbjct: 311 LIIWDLQH-STPRFICEHEEGVTSLTWIG--TSKYLATGCANGTVSIWDSL 358
Score = 65.7 bits (153), Expect = 1e-10
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
LT + + + L ++G G + + ++ +L+ + + SP I A
Sbjct: 245 LTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAAT 304
Query: 248 N--IGQLLVWEWQ--SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGF 303
+L++W+ Q + +++ + H +T L + ++ TG +G V +W++ G
Sbjct: 305 GGMDKKLIIWDLQHSTPRFICE---HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGN 361
Query: 304 CFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN 346
C T+H H+ V ++ S N F VS S+D T R ++ + ++N
Sbjct: 362 CVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQN 404
Score = 41.9 bits (94), Expect = 0.001
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 359 SCVALDSSGEFCAAGGQD-VFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLAS 417
SC+A G+ A+GG D V +IF G L VL G A + + + P + +
Sbjct: 117 SCLAFSYDGQLLASGGLDGVVQIF--DASSGTLKCVLDGPGAGIEWVRWHPR--GHIVLA 172
Query: 418 ASWDGTVRLWDCIDREVQCEPIR-LNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQ 476
S D ++ +W+ D+E N + F PDG+ I + D ++ + P TCE
Sbjct: 173 GSEDCSLWMWNA-DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCES 231
Query: 477 TGSVEG 482
V+G
Sbjct: 232 IHIVKG 237
Score = 37.5 bits (83), Expect = 0.032
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 27 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITV 86
+TCLD +S S L GSKD + +H V + + SL+ HTD + V F S +
Sbjct: 245 LTCLDINSNSSLAISGSKDGS--VHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLA 302
Query: 87 SRNG---QLCLWE 96
+ G +L +W+
Sbjct: 303 ATGGMDKKLIIWD 315
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 74.9 bits (176), Expect = 2e-13
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
H + + +S G + A + G+L +W+ + + GH+ D+ +A+S D +V+
Sbjct: 64 HFVEDVVLSSDGQF-ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 288 GGFDGKVKVWNTTNGFCFVTFHE----HKATVSGVTCSAN--KKFFVSSSLDGTVRCYDL 341
D +K+WNT G C T E H+ VS V S N + VS+S D TV+ ++L
Sbjct: 123 ASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Query: 342 TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
+ + R+ + S VA+ G CA+GG+D + +W + GK L L + +
Sbjct: 182 SNCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEANSV-I 238
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWDCIDREV 434
+L FSP L +A+ G +++WD + +
Sbjct: 239 HALCFSP--NRYWLCAATEHG-IKIWDLESKSI 268
Score = 53.6 bits (123), Expect = 5e-07
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 11/236 (4%)
Query: 259 SEQYVMK--QQGHSLDMTCLAYSPDGLHV-VTGGFDGKVKVWNTTN-----GFCFVTFHE 310
+E V+K + H+ +T +A D + V+ D + +W T G
Sbjct: 2 AEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG 61
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V V S++ +F +S S DG +R +DL + R + S + +
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV 121
Query: 371 AAGGQDVFEIF--VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+A +++ + K+ + E GH VS + FSP + SASWD TV++W+
Sbjct: 122 SASRDRTIKLWNTLGECKY-TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 429 CIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRS 484
+ +++ VA PDG A DG + ++ + ++ S+E S
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Score = 50.4 bits (115), Expect = 4e-06
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 267 QGHSLDMTCLAYSPDGLH--VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
+GH ++C+ +SP+ L +V+ +D VKVWN +N T H VS V S +
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
S DG V +DL + +L + S++ C + + CAA I +W
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS-PNRYWLCAATEHG---IKIWD 262
Query: 385 IKFGKLLEVL 394
++ ++E L
Sbjct: 263 LESKSIVEDL 272
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 73.7 bits (173), Expect = 4e-13
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 222 TLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPD 281
T++ + +S SP G +A + + +W+ +E + +GH + +A+SPD
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDT-TVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 282 GLHVVTGGFDGKVKVWNTTNGFCFVT-FHEHKATVSGVT-----CSANKKFFVSSSLDGT 335
G H+V+G G++ WN G + HK ++G++ S+ + FV+SS DG
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
R +D+T ++ L+ +L +CV G G QD I +W GKL+ L
Sbjct: 223 ARIWDITLKKSIICLSGHTLA-VTCVKWGGDG-IIYTGSQDC-TIKMWETTQGKLIRELK 279
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
GH ++SLA S T L + ++D T R
Sbjct: 280 GHGHWINSLALS---TEYVLRTGAFDHTGR 306
Score = 54.8 bits (126), Expect = 2e-07
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 252 LLVWEWQ-SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
+ +WE S+Q + GH + + +SPDG + + FD V++WN G F
Sbjct: 341 MFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG 400
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V V+ SA+ + +S S D T++ +++ + + L + F+ V GE
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFA-VDWSPDGEKV 459
Query: 371 AAGGQD 376
+GG+D
Sbjct: 460 VSGGKD 465
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 392 EVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFR 451
+ + GH V ++FSP +LAS S D TVRLWD + L VA+
Sbjct: 103 QTIAGHAEAVLCVSFSPD--GKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWS 160
Query: 452 PDGEEIAVSTLDGNITFFEPSTCEQTGS 479
PDG+ + + G I + P E GS
Sbjct: 161 PDGKHLVSGSKSGEICCWNPKKGELEGS 188
Score = 42.7 bits (96), Expect = 9e-04
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 304 CFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQF-SCVA 362
C T H V V+ S + K S S D TVR +DL Y T + VA
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL--YTETPLFTCKGHKNWVLTVA 158
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLL-EVLGGHEAPVSSLAFSPTLTST---RLASA 418
G+ +G + EI W+ K G+L L GH+ ++ +++ P S+ R ++
Sbjct: 159 WSPDGKHLVSGSKS-GEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 419 SWDGTVRLWD 428
S DG R+WD
Sbjct: 218 SKDGDARIWD 227
Score = 42.3 bits (95), Expect = 0.001
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 223 LSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDG 282
+ +S H ++ V GD I + + +WE + + + +GH + LA S +
Sbjct: 235 ICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEY 294
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVS-GVTCSANKKFFVSSSLDGTVRCYDL 341
+ + TG FD + + + KA T + + VS S D T+ ++
Sbjct: 295 V-LRTGAFDHTGRQYPPNE-------EKQKALERYNKTKGDSPERLVSGSDDFTMFLWEP 346
Query: 342 TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
+ + + + + V G++ A+ D + +W+ G+ + V GH PV
Sbjct: 347 SVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDK-SVRLWNGITGQFVTVFRGHVGPV 405
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEI 457
+++S S L S S D T+++W+ ++++ + + V + PDGE++
Sbjct: 406 YQVSWSAD--SRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Score = 41.1 bits (92), Expect = 0.003
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 25 DEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
+ V C+ +S + LA GS DTT ++ + Y E +++ GH + ++ V + L+
Sbjct: 110 EAVLCVSFSPDGKQLASGSGDTTVRLWDL-YTET-PLFTCKGHKNWVLTVAWSPDGKHLV 167
Query: 85 TVSRNGQLCLW 95
+ S++G++C W
Sbjct: 168 SGSKSGEICCW 178
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 19 VFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFER 78
VF+ + V + WS+ SRLL GSKD+T KI + + L GH D++ V +
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK--LKQDLPGHADEVFAVDWSP 454
Query: 79 KSLDLITVSRNGQLCLWE 96
+++ ++ L LW+
Sbjct: 455 DGEKVVSGGKDRVLKLWK 472
Score = 38.3 bits (85), Expect = 0.018
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 252 LLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW 297
L +WE ++++ GH+ ++ + +SPDG VV+GG D +K+W
Sbjct: 426 LKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 71.7 bits (168), Expect = 2e-12
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 182 ADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW 241
A R ++ +V H ++ SG + + + ++E + S P W
Sbjct: 12 AQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQW 71
Query: 242 IAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ ++ + V+ + + V + HS + C+A P +V++ D +K+W+ N
Sbjct: 72 VVAGADDM-YIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 302 GF-CFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
G+ C F H V V + + F S+SLD T++ ++L TL + +
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ-KGVN 189
Query: 360 CVALDSSGEF-CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASA 418
CV + G+ G D VW + ++ L GH VS++ F P L + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI--IITG 247
Query: 419 SWDGTVRLW 427
S DGTVR+W
Sbjct: 248 SEDGTVRIW 256
Score = 50.4 bits (115), Expect = 4e-06
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 238 PGDWIAFACPNIGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDG--LHVVTGGFDGKV 294
P D FA ++ + + +W S H + C+ Y G +++TG D
Sbjct: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTL 350
KVW+ C T H VS V ++ S DGTVR + T YR TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 44.0 bits (99), Expect = 4e-04
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
+ G V +WN +F + V K++ V+ + D +R Y+ +
Sbjct: 35 YSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKV 94
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSP 408
+ S CVA+ + + + D+ I +W + G ++ GH V + F+P
Sbjct: 95 FEAHS-DYIRCVAVHPTLPYVLSSSDDML-IKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 409 TLTSTRLASASWDGTVRLWD 428
T+T ASAS D T+++W+
Sbjct: 153 KDTNT-FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.17
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 27 VTCLDW--SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
V C+D+ L GS D T K+ +Y + +L GHT + V F + +I
Sbjct: 188 VNCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 85 TVSRNGQLCLWEAS 98
T S +G + +W A+
Sbjct: 246 TGSEDGTVRIWHAT 259
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 71.7 bits (168), Expect = 2e-12
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 182 ADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW 241
A R ++ +V H ++ SG + + + ++E + S P W
Sbjct: 12 AQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQW 71
Query: 242 IAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ ++ + V+ + + V + HS + C+A P +V++ D +K+W+ N
Sbjct: 72 VVAGADDM-YIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 302 GF-CFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
G+ C F H V V + + F S+SLD T++ ++L TL + +
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ-KGVN 189
Query: 360 CVALDSSGEF-CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASA 418
CV + G+ G D VW + ++ L GH VS++ F P L + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI--IITG 247
Query: 419 SWDGTVRLW 427
S DGTVR+W
Sbjct: 248 SEDGTVRIW 256
Score = 50.4 bits (115), Expect = 4e-06
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 238 PGDWIAFACPNIGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDG--LHVVTGGFDGKV 294
P D FA ++ + + +W S H + C+ Y G +++TG D
Sbjct: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTL 350
KVW+ C T H VS V ++ S DGTVR + T YR TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 44.0 bits (99), Expect = 4e-04
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
+ G V +WN +F + V K++ V+ + D +R Y+ +
Sbjct: 35 YSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKV 94
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSP 408
+ S CVA+ + + + D+ I +W + G ++ GH V + F+P
Sbjct: 95 FEAHS-DYIRCVAVHPTLPYVLSSSDDML-IKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 409 TLTSTRLASASWDGTVRLWD 428
T+T ASAS D T+++W+
Sbjct: 153 KDTNT-FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.17
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 27 VTCLDW--SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
V C+D+ L GS D T K+ +Y + +L GHT + V F + +I
Sbjct: 188 VNCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 85 TVSRNGQLCLWEAS 98
T S +G + +W A+
Sbjct: 246 TGSEDGTVRIWHAT 259
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 71.7 bits (168), Expect = 2e-12
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 182 ADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW 241
A R ++ +V H ++ SG + + + ++E + S P W
Sbjct: 12 AQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQW 71
Query: 242 IAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ ++ + V+ + + V + HS + C+A P +V++ D +K+W+ N
Sbjct: 72 VVAGADDM-YIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 302 GF-CFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
G+ C F H V V + + F S+SLD T++ ++L TL + +
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ-KGVN 189
Query: 360 CVALDSSGEF-CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASA 418
CV + G+ G D VW + ++ L GH VS++ F P L + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI--IITG 247
Query: 419 SWDGTVRLW 427
S DGTVR+W
Sbjct: 248 SEDGTVRIW 256
Score = 50.4 bits (115), Expect = 4e-06
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 238 PGDWIAFACPNIGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDG--LHVVTGGFDGKV 294
P D FA ++ + + +W S H + C+ Y G +++TG D
Sbjct: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTL 350
KVW+ C T H VS V ++ S DGTVR + T YR TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 44.0 bits (99), Expect = 4e-04
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
+ G V +WN +F + V K++ V+ + D +R Y+ +
Sbjct: 35 YSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKV 94
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSP 408
+ S CVA+ + + + D+ I +W + G ++ GH V + F+P
Sbjct: 95 FEAHS-DYIRCVAVHPTLPYVLSSSDDML-IKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 409 TLTSTRLASASWDGTVRLWD 428
T+T ASAS D T+++W+
Sbjct: 153 KDTNT-FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.17
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 27 VTCLDW--SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
V C+D+ L GS D T K+ +Y + +L GHT + V F + +I
Sbjct: 188 VNCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 85 TVSRNGQLCLWEAS 98
T S +G + +W A+
Sbjct: 246 TGSEDGTVRIWHAT 259
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 70.5 bits (165), Expect = 4e-12
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 11/224 (4%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
GQ +W E + H + L ++ G +++TG D VW+ F
Sbjct: 346 GQARIWTLNGE-LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFE 404
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
H V N F +SS D + + R +T T + +CV D +G
Sbjct: 405 FHSGPTLDVDWRNNVSF-ATSSTDSMIYLCKIGETRPAKTFTGHQ-GEVNCVKWDPTGSL 462
Query: 370 CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR-------LASASWDG 422
A+ D +W+IK + L H + ++ +SPT T LASAS+D
Sbjct: 463 LASCSDDS-TAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 423 TVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
TV+LWD ++ C +AF P+GE IA +LD +I
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Score = 59.7 bits (138), Expect = 7e-09
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 38/343 (11%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKE---YDSDRDAEQEQNNSKVNSEEN-- 161
K + ++R +++ E E E ++ E+EK+ + +R+ E+E+ K+ E++
Sbjct: 151 KLEREKEREREKIEREKEREREKMEREIFEREKDRLKLEKEREIEREREREKIEREKSHE 210
Query: 162 ------DKRLMYKKLGRHYIGDAIRNA---DRKVKLTAVQYHKENK--LLVTGFSSGLFF 210
D+ ++ + + GD A D + T+ H N ++ G +S +
Sbjct: 211 KQLGDADREMVIDQTDKEIAGDGSTGAEPMDIVMTPTSQTSHIPNSDVRILEGHTSEVCA 270
Query: 211 LHEMPDVNLIHTLS-ISEHRISSISVSPPGDWIAFACP-NIGQLLVWEWQSEQYVMKQQG 268
P +L+ + S + RI SI P G + A NI L++ + K
Sbjct: 271 CAWSPSASLLASGSGDATARIWSI---PEGSFKAVHTGRNINALILKHAKG-----KSNE 322
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
S D+T L ++ +G + TG DG+ ++W T NG T +HK + + + + +
Sbjct: 323 KSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLL 381
Query: 329 SSSLDGTVRCYDLTR---YRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
+ S+D T +D+ + F + P+L +D A I++ I
Sbjct: 382 TGSVDRTAVVWDVKAEEWKQQFEFHSGPTL------DVDWRNNVSFATSSTDSMIYLCKI 435
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ + GH+ V+ + + P T + LAS S D T ++W+
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDP--TGSLLASCSDDSTAKIWN 476
Score = 53.2 bits (122), Expect = 6e-07
Identities = 32/166 (19%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 195 KENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLV 254
+ N T + + +L ++ + T + + ++ + P G +A +C + +
Sbjct: 416 RNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLA-SCSDDSTAKI 474
Query: 255 WEWQSEQYVMKQQGHSLDMTCLAYSPDG---------LHVVTGGFDGKVKVWNTTNGFCF 305
W + +V + H+ ++ + +SP G L + + FD VK+W+ G
Sbjct: 475 WNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKML 534
Query: 306 VTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
+F+ H+ V + S N ++ S SLD ++ + + + +T T
Sbjct: 535 CSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYT 580
Score = 49.2 bits (112), Expect = 1e-05
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV--------T 319
GH ++ C+ + P G + + D K+WN EH + + T
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 320 CSANKKF-FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
+ NK+ S+S D TV+ +D + + +S +A +GE+ A+G D
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYS-LAFSPNGEYIASGSLDK- 563
Query: 379 EIFVWSIKFGKLLEVLGGH 397
I +WSIK GK+++ G+
Sbjct: 564 SIHIWSIKEGKIVKTYTGN 582
Score = 35.9 bits (79), Expect = 0.098
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 9 GEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHT 68
GE RP + F EV C+ W LLA S D+T KI ++ ++ ++ L HT
Sbjct: 436 GETRP---AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK--QSTFVHDLREHT 490
Query: 69 DKIIGVFFERKSLDLITVSRNGQLCLWEASIDA 101
+I + + T + N QL L AS D+
Sbjct: 491 KEIYTIRWSPTGPG--TNNPNKQLTLASASFDS 521
Score = 35.1 bits (77), Expect = 0.17
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 26 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLIT 85
+VT LDW+ LLA GS D +I T L + +LS H I + + +K L+T
Sbjct: 326 DVTTLDWNGEGTLLATGSCDGQARIWT---LNGELISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 86 VSRNGQLCLWEASID 100
S + +W+ +
Sbjct: 383 GSVDRTAVVWDVKAE 397
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 70.1 bits (164), Expect = 5e-12
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
QGH + +A+ P TG D +K+W+ G +T H V G+ S +
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
S+ D V+C+DL + + R+ L C+AL + + GG+D VW I+
Sbjct: 233 MFSAGDDKQVKCWDLEQNKVIRSYHG-HLSGVYCLALHPTLDVLLTGGRDSV-CRVWDIR 290
Query: 387 FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ L GH+ V S+ P T ++ + S D T++ WD
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRP--TDPQVVTGSHDTTIKFWD 330
Score = 56.8 bits (131), Expect = 5e-08
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 5/178 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
VW+ +++ + GH + + P VVTG D +K W+ G T HK
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
+V +T + F S+S D T + + L + + S + +A++ G G
Sbjct: 346 SVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG 404
Query: 374 GQDVFEIFVW----SIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+ W S + + + G E+ A T +RL + D T+++W
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 50.0 bits (114), Expect = 6e-06
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 190 AVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNI 249
+V + N+ TG + + ++ L TL+ ++ ++VS ++ F+ +
Sbjct: 181 SVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM-FSAGDD 239
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
Q+ W+ + + + GH + CLA P ++TGG D +VW+
Sbjct: 240 KQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALS 299
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
H TV V V+ S D T++ +DL + TLT
Sbjct: 300 GHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLT 341
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 18 RVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFE 77
R + L V CL +L G +D+ ++ + + +++LSGH + + VF
Sbjct: 254 RSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR--TKMQIFALSGHDNTVCSVFTR 311
Query: 78 RKSLDLITVSRNGQLCLWE 96
++T S + + W+
Sbjct: 312 PTDPQVVTGSHDTTIKFWD 330
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 69.7 bits (163), Expect = 7e-12
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GHS + +SP G V++ D +++W+T V + H V S +F
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
S S D T R + + R + R + S V + + A G D + +W ++
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAG----HLSDVDWHPNCNYIATGSSDK-TVRLWDVQT 530
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ 447
G+ + + GH + V SLA SP +AS DGT+ +WD + NS
Sbjct: 531 GECVRIFIGHRSMVLSLAMSP--DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWS 588
Query: 448 VAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRS 484
+++ +G +A + D + ++ ++ + E ++
Sbjct: 589 LSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN 625
Score = 65.3 bits (152), Expect = 1e-10
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
+ S + SPPGD++ + + + +W + ++ +GH+ + +SP G + +
Sbjct: 421 VYSATFSPPGDFVLSSSADT-TIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
D ++W+ H +S V N + + S D TVR +D+ R
Sbjct: 480 HDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRI 536
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPT 409
+ S +A+ G + A+G +D I +W + + + L GH + V SL++S
Sbjct: 537 FIGHRSMVLS-LAMSPDGRYMASGDED-GTIMMWDLSTARCITPLMGHNSCVWSLSYSG- 593
Query: 410 LTSTRLASASWDGTVRLWD 428
+ LAS S D TV+LWD
Sbjct: 594 -EGSLLASGSADCTVKLWD 611
Score = 55.6 bits (128), Expect = 1e-07
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 236 SPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVK 295
SP G + A +C + +W Q + GH D+ + P+ ++ TG D V+
Sbjct: 469 SPFGHYFA-SCSHDRTARIWSMDRIQPLRIMAGHLSDVD---WHPNCNYIATGSSDKTVR 524
Query: 296 VWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSL 355
+W+ G C F H++ V + S + ++ S DGT+ +DL+ R +P +
Sbjct: 525 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR----CITPLM 580
Query: 356 VQFSCV-ALDSSGE--FCAAGGQDVFEIFVWSIKFGKLL---EVLGGHEAPVSSLAFSPT 409
SCV +L SGE A+G D + +W + L E G+ + SL PT
Sbjct: 581 GHNSCVWSLSYSGEGSLLASGSADC-TVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPT 639
Score = 55.6 bits (128), Expect = 1e-07
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 220 IHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYS 279
I L I +S + P ++IA + + +W+ Q+ + V GH + LA S
Sbjct: 492 IQPLRIMAGHLSDVDWHPNCNYIATGSSD-KTVRLWDVQTGECVRIFIGHRSMVLSLAMS 550
Query: 280 PDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
PDG ++ +G DG + +W+ + C H + V ++ S S S D TV+ +
Sbjct: 551 PDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Query: 340 DLT 342
D+T
Sbjct: 611 DVT 613
Score = 46.8 bits (106), Expect = 5e-05
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
L+ V +H + TG S L ++ + + S+++SP G ++A
Sbjct: 502 LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDE 561
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ G +++W+ + + + GH+ + L+YS +G + +G D VK+W+ T+
Sbjct: 562 D-GTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 393 VLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+L GH PV S FSP + S+S D T+RLW
Sbjct: 413 LLLGHSGPVYSATFSP--PGDFVLSSSADTTIRLW 445
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 69.7 bits (163), Expect = 7e-12
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 182 ADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW 241
A R ++ +V H ++ SG + ++ + ++E + S W
Sbjct: 12 AQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQW 71
Query: 242 IAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ ++ + V+ + + + + H+ + C+A P +V++ D +K+W+
Sbjct: 72 VVAGADDMF-IRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 302 GF-CFVTFHEHKATVSGVTCSA-NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
G+ C F H V VT + + F S+SLD T++ ++L TL + L +
Sbjct: 131 GWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA-HLKGVN 189
Query: 360 CVALDSSGEF-CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASA 418
CV + G+ G D VW + ++ L GH VS+++F P L + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPI--IITG 247
Query: 419 SWDGTVRLW 427
S DGTVR+W
Sbjct: 248 SEDGTVRIW 256
Score = 51.6 bits (118), Expect = 2e-06
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDG--LH 284
H + ++ +P D FA ++ + + +W S H + C+ Y G +
Sbjct: 143 HYVMQVTFNPK-DTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPY 201
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
++TG D KVW+ C T H VS V+ ++ S DGTVR + T Y
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTY 261
Query: 345 RNFRTL 350
R TL
Sbjct: 262 RLENTL 267
Score = 45.2 bits (102), Expect = 2e-04
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
+ G + +WN +F + V A K++ V+ + D +R Y+ +
Sbjct: 35 YSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKV 94
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLL-EVLGGHEAPVSSLAFSP 408
+ + CVA+ + + + D+ I +W + G L ++ GH V + F+P
Sbjct: 95 FEAHA-DYIRCVAVHPTLPYVLSSSDDML-IKLWDWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 409 TLTSTRLASASWDGTVRLWD 428
T+T ASAS D T+++W+
Sbjct: 153 KDTNT-FASASLDRTIKIWN 171
Score = 35.5 bits (78), Expect = 0.13
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 24 LDEVTCLDW--SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSL 81
L V C+D+ L GS D T K+ +Y + +L GHT + V F +
Sbjct: 185 LKGVNCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLEGHTHNVSAVSFHPELP 242
Query: 82 DLITVSRNGQLCLWEAS 98
+IT S +G + +W A+
Sbjct: 243 IIITGSEDGTVRIWHAT 259
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 68.9 bits (161), Expect = 1e-11
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
+ ++++SP IA A + + V+ S ++ + GH L + C+ S DG +VTG
Sbjct: 543 VLAVAISPDAKHIAVALLD-STVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGS 601
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
D +K+W G C + H +V GV N + S D V+ +D ++ + T
Sbjct: 602 QDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLT 661
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQD 376
L + C+A+ + G+F G D
Sbjct: 662 LEGHH-AEIWCLAISNRGDFLVTGSHD 687
Score = 58.0 bits (134), Expect = 2e-08
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
G SL +T +A S L V G DG +++W+T G C V F+ HK V+ + +
Sbjct: 63 GPSLAVTSIASSASSL-VAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
S S D + +D+ L V LD G+ + +D F + VW ++
Sbjct: 122 ASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDG-GKKLVSSSKDKF-LRVWDLET 179
Query: 388 GKLLEVLGGHEAPVSSLAFSP 408
++++ GH + V S+ P
Sbjct: 180 QHCMQIVSGHHSEVWSVDTDP 200
Score = 46.4 bits (105), Expect = 7e-05
Identities = 29/158 (18%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 197 NKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWE 256
+ L+ G++ G + + + + ++++ + G +A + +++W+
Sbjct: 76 SSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKD-NDIILWD 134
Query: 257 WQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVS 316
E + + +GH +T L + G +V+ D ++VW+ C H + V
Sbjct: 135 VVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVW 194
Query: 317 GVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
V +++ V+ S D +R Y + Y + +L S S
Sbjct: 195 SVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDS 232
Score = 41.5 bits (93), Expect = 0.002
Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 21/316 (6%)
Query: 128 EFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYK----KLGRHYIGDAIRNAD 183
EF + E K + + S SE+N + K+ G +R D
Sbjct: 385 EFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTID 444
Query: 184 RKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIA 243
L ++ +NK + G SG+ + ++ + + I SI+ P
Sbjct: 445 SGYGLCSLIV-PQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFV 503
Query: 244 FACPNIGQLLVWEWQSEQYV-----------MKQQGHSLDMTCLAYSPDGLHVVTGGFDG 292
+ ++ WE+Q +Q +K + D+ +A SPD H+ D
Sbjct: 504 TVSAD-HEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDS 562
Query: 293 KVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTS 352
VKV+ + +++ + HK V + S++ + V+ S D ++ + L +++ +
Sbjct: 563 TVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFA 622
Query: 353 PSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTS 412
V + + + G+D + + KF LL L GH A + LA S
Sbjct: 623 HG-DSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLL-TLEGHHAEIWCLAISN--RG 678
Query: 413 TRLASASWDGTVRLWD 428
L + S D ++R WD
Sbjct: 679 DFLVTGSHDRSMRRWD 694
Score = 38.7 bits (86), Expect = 0.014
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 27 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITV 86
V C+D SS L+ GS+D KI +++ + S+ H D ++GV F R + L ++
Sbjct: 585 VMCIDISSDGELIVTGSQDKNLKIWGLDFGD--CHKSIFAHGDSVMGVKFVRNTHYLFSI 642
Query: 87 SRNGQLCLWEA 97
++ + W+A
Sbjct: 643 GKDRLVKYWDA 653
Score = 34.3 bits (75), Expect = 0.30
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 255 WEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHK 312
W+ ++++ +GH ++ CLA S G +VTG D ++ W+ + F+ + K
Sbjct: 651 WDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEK 708
Score = 33.9 bits (74), Expect = 0.40
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 27 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITV 86
VT L ++ +LA GSKD + V + ++ L GH D++ + F L++
Sbjct: 109 VTALRYNKVGSMLASGSKDNDIILWDV--VGESGLFRLRGHRDQVTDLVFLDGGKKLVSS 166
Query: 87 SRNGQLCLWEAS-------IDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEK 139
S++ L +W+ + V DT ++R + + E F A +
Sbjct: 167 SKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNG 226
Query: 140 EYDSDRDAEQEQNNSKVNSEEN 161
SD +A E S+ +S EN
Sbjct: 227 SLVSDSNA-NEIKASEEHSTEN 247
Score = 32.3 bits (70), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 439 IRLNSDALQVAFRPDGEEIAVSTLDGNITFF 469
+++N D L VA PD + IAV+ LD + F
Sbjct: 537 MKMNDDVLAVAISPDAKHIAVALLDSTVKVF 567
Score = 31.9 bits (69), Expect = 1.6
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 344 YRNFRTLTSPSLVQF--SCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL------G 395
Y+ + TS ++ S +A DS+G++ A + ++ +W ++ G + L G
Sbjct: 5 YQRYDAATSFGVISSVDSNIAYDSTGKYVLAPALE--KVGIWHVRQGVCSKTLTPSSSRG 62
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
G V+S+A S S+ +A DG++R+WD
Sbjct: 63 GPSLAVTSIASS---ASSLVAVGYADGSIRIWD 92
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 68.1 bits (159), Expect = 2e-11
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 216 DVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTC 275
D ++ T+ ++++++SP D + F+ + Q+ VW+ ++ + + +GH +
Sbjct: 49 DSSVKSTIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMG 107
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTC--SANKKFFVSSSLD 333
+A G + T G D KV VW+ GFC F HK VS + +NK +S S D
Sbjct: 108 MACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDD 167
Query: 334 GTVRCYDLTRYRNFRTLTSPSLVQFSCV---ALDSSGEFCAAGGQD 376
TVR +DL + + FS V AL G + G+D
Sbjct: 168 ATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRD 213
Score = 58.0 bits (134), Expect = 2e-08
Identities = 99/478 (20%), Positives = 180/478 (37%), Gaps = 33/478 (6%)
Query: 34 SCSRLLAVGSKDTTTKIHTV--EYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQ 91
S +L GS D T ++ + + E + + H + + L L + R+
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 92 LCLWEASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQ-- 149
+ LW+ + + V + + V + G F A D +K K+ +SD A
Sbjct: 216 VNLWDLHDYSCKATVATYEVL--EAVTTVSSGTPFASFVASLDQKKSKKKESDSQATYFI 273
Query: 150 ---EQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSS 206
E+ ++ E L +K + + R A+ L VT
Sbjct: 274 TVGERGVVRIWKSEGSICLYEQKSSDITVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQ 333
Query: 207 GLFF--LHEMPDVNLIHTLSISEHRISSISVSPPGDWIAF--ACPNIGQLLVWE--WQSE 260
F+ + + + L+ + + + + GD F N+ ++ V++ S
Sbjct: 334 FFFYSVVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSC 393
Query: 261 QYVM---KQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSG 317
YV+ K+ SLD TC++ S + L +VTG D V++WN T+ C H +
Sbjct: 394 SYVLAGHKEVVLSLD-TCVSSSGNVL-IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILA 451
Query: 318 VTCSANK-KFFVSSSLDGTVRCYDLTRYR---------NFRTLTSPSLVQFSCVALDSSG 367
V + FFVS S D T++ + L R++ + + VA+ +
Sbjct: 452 VAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARND 511
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
G +D +W + + L GH+ + S+ FS + +AS D TV++W
Sbjct: 512 SLVCTGSED-RTASIWRLPDLVHVVTLKGHKRRIFSVEFS--TVDQCVMTASGDKTVKIW 568
Query: 428 DCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSD 485
D S L+ +F DG + DG + + +T E + + D
Sbjct: 569 AISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHED 626
Score = 52.4 bits (120), Expect = 1e-06
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 3/150 (2%)
Query: 279 SPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRC 338
S DG + D + + ++T+ T T++ + S + K S+ +R
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE 398
+DL + R+ +A +SG A G D ++ VW + G GH+
Sbjct: 87 WDLETLKCIRSWKGHEGPVMG-MACHASGGLLATAGADR-KVLVWDVDGGFCTHYFRGHK 144
Query: 399 APVSSLAFSPTLTSTRLASASWDGTVRLWD 428
VSS+ F P L S S D TVR+WD
Sbjct: 145 GVVSSILFHPDSNKNILISGSDDATVRVWD 174
Score = 45.6 bits (103), Expect = 1e-04
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W +V+ +GH + + +S V+T D VK+W ++G C TF H +
Sbjct: 525 IWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
+V + + FVS DG ++ +++ T + +A+ E A G
Sbjct: 585 SVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHE-DKVWALAVGKKTEMIATG 643
Query: 374 GQDVFEIFVW 383
G D I +W
Sbjct: 644 GGDAV-INLW 652
Score = 42.7 bits (96), Expect = 9e-04
Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
H D+ +A + + V TG D +W + VT HK + V S + +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 329 SSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG 388
++S D TV+ + ++ +T + + +F + G + ++ W++
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKL--WNVNTS 615
Query: 389 KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQV 448
+ + HE V +LA + +A+ D + LW + + R +A+
Sbjct: 616 ECIATYDQHEDKVWALAVGK--KTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAIL- 672
Query: 449 AFRPDGEEIAVSTLDGNIT 467
G+E+ + LD T
Sbjct: 673 ----RGQELENAVLDAEYT 687
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 68.1 bits (159), Expect = 2e-11
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 10/242 (4%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYS-PDGLHVVTG 288
+SS+ G A AC G + V++ + + + HS + Y D LH+V+G
Sbjct: 96 VSSVCFRSDGALFA-ACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSG 154
Query: 289 GFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDL-TRYRN 346
G DG VK W+ HK V CS N V+ S D TV+ +D N
Sbjct: 155 GDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSN 214
Query: 347 FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS-IKFGKLLEVLGGHEAPVSSLA 405
+ + L V L S G AGG V VW I GK++ + H V+SL
Sbjct: 215 WIAEINHGLPVEDVVYLPSGGLIATAGGNSV---KVWDLIGGGKMVCSMESHNKTVTSLR 271
Query: 406 FSPTLTS-TRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDG 464
+ ++ +RL S + DG ++++D R +R + + + PDG + +G
Sbjct: 272 VARMESAESRLVSVALDGYMKVFD-YGRAKVTYSMRFPAPLMSLGLSPDGSTRVIGGSNG 330
Query: 465 NI 466
+
Sbjct: 331 MV 332
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 66.9 bits (156), Expect = 5e-11
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 182 ADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDW 241
A R ++ +V H ++ SG + + + ++E + S W
Sbjct: 12 AQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQW 71
Query: 242 IAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
+ ++ + V+ + + V + HS + C+A P +V++ D +K+W+
Sbjct: 72 VVAGADDM-YIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 302 GF-CFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
G+ C F H V VT + + F S+SLD T++ ++L TL + +
Sbjct: 131 GWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ-KGVN 189
Query: 360 CVALDSSGEF-CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASA 418
CV + G+ G D VW + ++ L GH VS++ F P L + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI--IITG 247
Query: 419 SWDGTVRLW 427
S DGTVR+W
Sbjct: 248 SEDGTVRIW 256
Score = 51.6 bits (118), Expect = 2e-06
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDG--LH 284
H + ++ +P D FA ++ + + +W S H + C+ Y G +
Sbjct: 143 HYVMQVTFNPK-DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
++TG D KVW+ C T H VS V ++ S DGTVR + T Y
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Query: 345 RNFRTL 350
R TL
Sbjct: 262 RLENTL 267
Score = 45.2 bits (102), Expect = 2e-04
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
+ G + +WN +F + V A K++ V+ + D +R Y+ +
Sbjct: 35 YSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKV 94
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSP 408
+ S CVA+ + + + D+ I +W + G ++ GH V + F+P
Sbjct: 95 FEAHS-DYIRCVAVHPTLPYVLSSSDDML-IKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 409 TLTSTRLASASWDGTVRLWD 428
T+T ASAS D T+++W+
Sbjct: 153 KDTNT-FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.17
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 27 VTCLDW--SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
V C+D+ L GS D T K+ +Y + +L GHT + V F + +I
Sbjct: 188 VNCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
Query: 85 TVSRNGQLCLWEAS 98
T S +G + +W A+
Sbjct: 246 TGSEDGTVRIWHAT 259
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 65.7 bits (153), Expect = 1e-10
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
QGH + +A+ P TG D +K+W+ G +T H V G+ S +
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTY 226
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
S+ D V+C+DL + + R+ L C+AL + + GG+D VW I+
Sbjct: 227 MFSAGDDKQVKCWDLEQNKVIRSYHG-HLHGVYCLALHPTLDVVLTGGRDSV-CRVWDIR 284
Query: 387 FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ VL H++ V S+ P T ++ + S D T++ WD
Sbjct: 285 TKMQIFVL-PHDSDVFSVLARP--TDPQVITGSHDSTIKFWD 323
Score = 52.4 bits (120), Expect = 1e-06
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
VW+ +++ + H D+ + P V+TG D +K W+ G T HK
Sbjct: 280 VWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKK 338
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
TV + + FVS+S D ++ + L + + S + VA++ G G
Sbjct: 339 TVRAMALHPKENDFVSASAD-NIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGG 397
Query: 374 GQDVFEIFVWSIKFG---KLLEVL---GGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
D ++ W K G + E + G E+ A T +RL + D T+++W
Sbjct: 398 --DKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMW 455
Score = 50.8 bits (116), Expect = 3e-06
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V V + ++F + S D T++ +D+ TLT + Q +A+ + +
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTG-HIGQVRGLAVSNRHTYM 227
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
+ G D ++ W ++ K++ GH V LA PTL + + D R+WD I
Sbjct: 228 FSAGDDK-QVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDV--VLTGGRDSVCRVWD-I 283
Query: 431 DREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
++Q + +SD V RP ++ + D I F++
Sbjct: 284 RTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 47.2 bits (107), Expect = 4e-05
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 190 AVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNI 249
+V + N+ TG + + ++ L TL+ ++ ++VS ++ F+ +
Sbjct: 175 SVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYM-FSAGDD 233
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN-TTNGFCFVTF 308
Q+ W+ + + + GH + CLA P V+TGG D +VW+ T FV
Sbjct: 234 KQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL- 292
Query: 309 HEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGE 368
H + V V ++ S D T++ +DL ++ T+T+ + +
Sbjct: 293 -PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKEND 351
Query: 369 FCAAGGQDV 377
F +A ++
Sbjct: 352 FVSASADNI 360
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 65.7 bits (153), Expect = 1e-10
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 252 LLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEH 311
++VW+ Q+ Q + + +GH ++C+ G V+T DG VK+W+ C T
Sbjct: 921 VIVWDKQTTQLLEELKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRC 979
Query: 312 KATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCA 371
+ + + + ++ D +D+ + L + S ++ +
Sbjct: 980 SSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT----L 1035
Query: 372 AGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
G D + VWS+ G VL H PV S+ +SP + + S DG +R W+ +
Sbjct: 1036 ITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSP--FDKGIITGSADGLLRFWENDE 1093
Query: 432 REVQC-EPIRLNSDALQVAFRPDGEEIAVSTLDGNITFF 469
++C + I L+S ++ ++ + + D +++ F
Sbjct: 1094 GGIKCVKNITLHSSSI-LSINAGENWLGIGAADNSMSLF 1131
Score = 46.8 bits (106), Expect = 5e-05
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 326 FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
FF+S S D V+ +D + + T V SS G D + VW
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKG--HTGTVRAISSDRGKIVSGSDDLSVIVWDK 926
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ +LLE L GH++ VS + L+ R+ +A+ DGTV++WD
Sbjct: 927 QTTQLLEELKGHDSQVSCVKM---LSGERVLTAAHDGTVKMWD 966
Score = 46.0 bits (104), Expect = 9e-05
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W+ +S + + K +GH+ + + D L +TG D +VW+ + G C H
Sbjct: 1006 IWDIRSGKQMHKLKGHTKWIRSIRMVEDTL--ITGSDDWTARVWSVSRGSCDAVLACHAG 1063
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAG 373
V V S K ++ S DG +R ++ + + + +L S +++++ + G
Sbjct: 1064 PVQSVEYSPFDKGIITGSADGLLRFWE-NDEGGIKCVKNITLHSSSILSINAGENWLGIG 1122
Query: 374 GQD-VFEIFVWSIKFGKLLEVLGGHEAPVSSLA----FSPTLTSTRLASASWDGTVRLWD 428
D +F G + + P + A + L R+ S +G +RLWD
Sbjct: 1123 AADNSMSLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASDLERKRICSGGRNGVLRLWD 1182
Score = 31.9 bits (69), Expect = 1.6
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 190 AVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIA------ 243
+V+Y +K ++TG + GL E + + +I+ H S +S++ +W+
Sbjct: 1067 SVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSINAGENWLGIGAADN 1126
Query: 244 ----FACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
F P+ V WQ Y + Q+ ++ + C+A + + +GG +G +++W+
Sbjct: 1127 SMSLFHRPSNAGTKVSGWQ--LYRVPQRTAAV-VRCVASDLERKRICSGGRNGVLRLWDA 1183
Query: 300 T 300
T
Sbjct: 1184 T 1184
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 65.3 bits (152), Expect = 1e-10
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
Query: 245 ACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFC 304
+C Q+ W+ + + + K +GH ++ + ++ VV+ GFD ++VW+ +
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSV 136
Query: 305 --FVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVA 362
TV V + K + S+DGTVR +D+ R R ++ +C++
Sbjct: 137 EPVQIIDTFLDTVMSVVLT--KTEIIGGSVDGTVRTFDM---RIGREMSDNLGQPVNCIS 191
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG 422
+ + G AG D + + G+LL+V GH + T + + S DG
Sbjct: 192 ISNDGNCVLAGCLD-STLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDG 250
Query: 423 TVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
V WD +D +V + + V++ P + + S++DG I
Sbjct: 251 LVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
Score = 52.4 bits (120), Expect = 1e-06
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Query: 260 EQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT 319
E +++K GH + ++ DG + +T G D +++WN G T+ H V V
Sbjct: 10 EAHILK--GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVH 67
Query: 320 CSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFE 379
+++ F S D V +D++ R R + + V + S + G D
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHD-GEVNAVKFNDSSSVVVSAGFD-RS 125
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC-IDREVQCEP 438
+ VW + +E + + + ++ S LT T + S DGTVR +D I RE+
Sbjct: 126 LRVWDCR-SHSVEPVQIIDTFLDTV-MSVVLTKTEIIGGSVDGTVRTFDMRIGREMS--- 180
Query: 439 IRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCE 475
L ++ DG + LD + + +T E
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGE 217
Score = 42.7 bits (96), Expect = 9e-04
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGH---SLDMTCLAYSPDGLHVV 286
++ IS+S G+ + C + L + + + + + +GH S C + D HV+
Sbjct: 187 VNCISISNDGNCVLAGCLD-STLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDA-HVI 244
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
G DG V W+ + F H V+ V+ + ++SS+DGT+R +
Sbjct: 245 GGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 40.7 bits (91), Expect = 0.003
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 4/176 (2%)
Query: 252 LLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEH 311
L VW+ +S Q + T ++ ++ G DG V+ ++ G
Sbjct: 126 LRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGR--EMSDNL 183
Query: 312 KATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCA 371
V+ ++ S + ++ LD T+R D T + F ++ +
Sbjct: 184 GQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHV 243
Query: 372 AGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
GG + +F W + K+L H+ V+S+++ P + ++S DGT+R+W
Sbjct: 244 IGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPK--EDCMLTSSVDGTIRVW 297
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 64.1 bits (149), Expect = 3e-10
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 18/265 (6%)
Query: 220 IHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSE-QYVMKQQGHSLDMTCLAY 278
I LS + ++ +P G IA + ++ +W + + M +GH + L +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHD-REIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 279 SPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK--KFFVSSSLDGTV 336
+ DG +V+ D V+ W+ G EH + V+ C + +S S DGT
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS-CCPTRRGPPLIISGSDDGTA 163
Query: 337 RCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGG 396
+ +D+ + +T P Q + V+ + + GG D ++ VW ++ G+ L G
Sbjct: 164 KLWDMRQRGAIQTF--PDKYQITAVSFSDAADKIFTGGVD-NDVKVWDLRKGEATMTLEG 220
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQ--CEPI------RLNSDALQV 448
H+ ++ ++ SP + L + D + +WD Q C I + L+
Sbjct: 221 HQDTITGMSLSP--DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 449 AFRPDGEEIAVSTLDGNITFFEPST 473
++ PDG ++ + D + ++ ++
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDTTS 303
Score = 52.0 bits (119), Expect = 1e-06
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 199 LLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQ 258
L+++G G L +M I T +++I+++S S D I F + VW+ +
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKI-FTGGVDNDVKVWDLR 210
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN----TTNGFCFVTF--HEHK 312
+ M +GH +T ++ SPDG +++T G D K+ VW+ C F H+H
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHN 270
Query: 313 ATVSGVTC--SANKKFFVSSSLDGTVRCYDLTRYRNFRTL 350
+ + C S + + S D V +D T R L
Sbjct: 271 FEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL 310
Score = 48.8 bits (111), Expect = 1e-05
Identities = 40/213 (18%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 260 EQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFC--FVTFHEHKATVSG 317
E +M GH + + ++P G + +G D ++ +W +G C F+ HK +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWR-VHGDCKNFMVLKGHKNAILD 101
Query: 318 VTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDV 377
+ +++ VS+S D TVR +D+ + + + S SC G G D
Sbjct: 102 LHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP-TRRGPPLIISGSDD 160
Query: 378 FEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCE 437
+W ++ ++ + +++++FS + ++ + D V++WD E
Sbjct: 161 GTAKLWDMRQRGAIQTF-PDKYQITAVSFSD--AADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 438 PIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
++ PDG + + +D + ++
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 383 WSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLA-SASWDGTVRLWDCIDR-EVQCEPIR 440
W ++ GK ++ + H + V+S PT L S S DGT +LWD R +Q P +
Sbjct: 123 WDVETGKQIKKMAEHSSFVNSCC--PTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK 180
Query: 441 LNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSG 489
A V+F ++I +D ++ ++ E T ++EG D +G
Sbjct: 181 YQITA--VSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Score = 39.5 bits (88), Expect = 0.008
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 178 AIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSP 237
AI+ K ++TAV + + TG + ++ TL + I+ +S+SP
Sbjct: 173 AIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP 232
Query: 238 PGDWIAFACPNIGQLLVWEWQ----SEQYVMKQQGHS----LDMTCLAYSPDGLHVVTGG 289
G ++ + +L VW+ + + V +GH ++ ++SPDG V G
Sbjct: 233 DGSYLLTNGMD-NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGS 291
Query: 290 FDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTV 336
D V +W+TT+ H +V+ + S S D +
Sbjct: 292 SDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 33.5 bits (73), Expect = 0.52
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 26 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLIT 85
++T + +S + + G D K+ + E TM +L GH D I G+ L+T
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGE-ATM-TLEGHQDTITGMSLSPDGSYLLT 239
Query: 86 VSRNGQLCLWE 96
+ +LC+W+
Sbjct: 240 NGMDNKLCVWD 250
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 63.3 bits (147), Expect = 6e-10
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 11/237 (4%)
Query: 196 ENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVW 255
+NK ++ SS F+ ++ + HTL+ ++ ++ VS + + +W
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATV 315
+ + Y + + + S DGL V +G DG +++W+ G H + V
Sbjct: 344 DLH-KGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAV 402
Query: 316 SGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTS-----PSLVQFSCVALDSSGEFC 370
+ V+ S N ++S D +D TL + S SC++ D ++
Sbjct: 403 TSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDD--DYV 460
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
AAG D + VWS+ G ++ +L +P+ ++S LASA +G V W
Sbjct: 461 AAGSAD-GSVHVWSLSKGNIVSILKEQTSPILCCSWSG--IGKPLASADKNGYVCTW 514
Score = 40.7 bits (91), Expect = 0.003
Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 4/212 (1%)
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN 346
TGG D VK+W+T +G + + + + + + K ++++ + +D++ R
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 347 FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAF 406
TLT + + S + D I +W + G + + +++
Sbjct: 308 RHTLTGHTDKVCAVDVSKFSSRHVVSAAYD-RTIKLWDLHKGYCTNTV-LFTSNCNAICL 365
Query: 407 SPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
S + + S DG +RLWD ++ E +S V+ +G I S D
Sbjct: 366 S--IDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 423
Query: 467 TFFEPSTCEQTGSVEGRSDLGSGRAETDLVTP 498
F+ T E G++ + + ++P
Sbjct: 424 NVFDTRTLEICGTLRASGNRLASNWSRSCISP 455
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 62.5 bits (145), Expect = 1e-09
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
LA +PDG ++T D ++++ N V E T ++ S + KFF+ +
Sbjct: 363 LAVTPDGESMITVFSDKEIRILNLETKVERVISEEQPIT--SLSISGDGKFFIVNLSCQE 420
Query: 336 VRCYDLT----RYRNFRTLTSPSLVQFSCVA-LDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
+ +DL + F V SC LDSS F A+G +D ++++W++K K
Sbjct: 421 IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSS--FIASGSEDS-QVYIWNLKNTKP 477
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
LEVL GH V+ ++++P LASAS D T+R+W
Sbjct: 478 LEVLSGHSMTVNCVSWNPK-NPRMLASASDDQTIRIW 513
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 62.1 bits (144), Expect = 1e-09
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 23/197 (11%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT--------- 300
G + +WE + + + K GH +TCL +S D +V+G DG ++VW+
Sbjct: 100 GDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQ 159
Query: 301 --NGFCFVTFHEHKATVSGVTCSAN--KKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLV 356
N F+EH +V+ + +SSS D T + + L+R + + + PS++
Sbjct: 160 QGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVI 219
Query: 357 QFSCVALDSSGEFCAAGGQDVFEIFVWSI----KFGKLLEVLGG-HEAPVSSLAFSPTLT 411
+ +ALD G AG +D +I++ +I ++G +VLG E + +
Sbjct: 220 --NALALDPGGCVFYAGARD-SKIYIGAINATSEYG--TQVLGSVSEKGKAITCLAYCAD 274
Query: 412 STRLASASWDGTVRLWD 428
L S S DG V +WD
Sbjct: 275 GNLLISGSEDGVVCVWD 291
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G + W W Q +K + LA + +G ++V GG G + +W G +H
Sbjct: 59 GSIFYWSWTKPQAEVKSYPVE-PIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWH 117
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTR 343
H +V+ + S + VS S DG++R + L R
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIR 151
Score = 48.8 bits (111), Expect = 1e-05
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD-----GTVRCY 339
+ + D + W+ G + F + G+T + +KF SS L G++ +
Sbjct: 6 IASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLT-AVGEKFLASSQLSARNTSGSIFYW 64
Query: 340 DLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEA 399
T+ + + S + +A ++ G + GG +I++W + GKLL+ GH
Sbjct: 65 SWTKPQ--AEVKSYPVEPIKALAANNEGTYLVGGGISG-DIYLWEVATGKLLKKWHGHYR 121
Query: 400 PVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
V+ L FS + L S S DG++R+W I
Sbjct: 122 SVTCLVFSG--DDSLLVSGSQDGSIRVWSLI 150
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 503 KTKAFTTICYSADGTCILGGGNSKNVCLYSVKDSVLIKKFVVTENRSLDAVND 555
K KA T + Y ADG ++ G VC++ K ++ + + VN+
Sbjct: 262 KGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGSRKGPVNN 314
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 61.7 bits (143), Expect = 2e-09
Identities = 61/230 (26%), Positives = 89/230 (38%), Gaps = 15/230 (6%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W V GHSL + LA P G+ + D V+V++ +
Sbjct: 44 LWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPS 103
Query: 314 TVSGVTCSANKKFF-VSSSLDGTVRCYDLTRYRNFRTLTSP-----------SLVQFSC- 360
V G+ V+ +V+ +D +R TL+ P S +F
Sbjct: 104 EVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLS 163
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASW 420
VA +G+ A G D I V+ + KLL L GH PV SL FSP + L S S
Sbjct: 164 VAWSPNGKRLACGSMDG-TICVFDVDRSKLLHQLEGHNMPVRSLVFSP-VDPRVLFSGSD 221
Query: 421 DGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
DG V + D + + S L V PDG IA + D + ++
Sbjct: 222 DGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD 271
Score = 47.2 bits (107), Expect = 4e-05
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-ANKKFFVSSSLDG 334
+A+SP+G + G DG + V++ H V + S + + S S DG
Sbjct: 164 VAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDG 223
Query: 335 TVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
V +D +++ + S A G A G D + +W +K ++ +
Sbjct: 224 HVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAI-ATGSSDR-TVRLWDLKMRAAIQTM 281
Query: 395 GGHEAPVSSLAFSPT----LTSTRLASASWDGTVRLWD 428
H V S+AF P + + RLAS S D +V L+D
Sbjct: 282 SNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
Score = 42.7 bits (96), Expect = 9e-04
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 177 DAIRNADR---KVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSI 233
DA + +D+ K + +V + K L G G + ++ L+H L + S+
Sbjct: 147 DAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSL 206
Query: 234 SVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGK 293
SP + F+ + G + + + + + + GH+ + + SPDG + TG D
Sbjct: 207 VFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRT 266
Query: 294 VKVWNTTNGFCFVTFHEHKATVSGV 318
V++W+ T H V V
Sbjct: 267 VRLWDLKMRAAIQTMSNHNDQVWSV 291
Score = 42.3 bits (95), Expect = 0.001
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
++ SLD TV+ + RT T SL + +A SG A+ D F + V+ +
Sbjct: 34 LTGSLDETVKLWRPDELDLVRTNTGHSL-GVAALAAHPSGIIAASSSIDSF-VRVFDVDT 91
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC----------IDREVQCE 437
+ VL + V + F P T +A S +V+LWD I R +
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGS-SASVKLWDTASWRLISTLSIPRPDAPK 150
Query: 438 PIRLNSD---ALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRS 484
P S L VA+ P+G+ +A ++DG I F+ + +EG +
Sbjct: 151 PSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHN 200
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 215 PDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMT 274
PD + S+ + S++ SP G +A + G + V++ + + + +GH++ +
Sbjct: 146 PDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMD-GTICVFDVDRSKLLHQLEGHNMPVR 204
Query: 275 CLAYSP-DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
L +SP D + +G DG V + + + H + V V S + + S D
Sbjct: 205 SLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSD 264
Query: 334 GTVRCYDLTRYRNFRTLTS 352
TVR +DL +T+++
Sbjct: 265 RTVRLWDLKMRAAIQTMSN 283
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 61.7 bits (143), Expect = 2e-09
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLT 342
++ + +DG V++W+ G F + EH+ V S ++ FVS S D +V+ + +
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 343 RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL-LEVLGGHEAPV 401
R+ T+ SP+ V CV S A G ++++ + +++ K L GHE V
Sbjct: 840 EKRSLGTIWSPANV--CCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAV 897
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
S + F + S + SAS D +++LW+
Sbjct: 898 SYVKF---MDSETIVSASTDNSLKLWN 921
Score = 36.3 bits (80), Expect = 0.074
Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 14/228 (6%)
Query: 269 HSLDMTC-LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATV-----SGVTC-- 320
+S + C L++ PD H+ G K+K+++ N F + H V S ++C
Sbjct: 714 NSASVVCSLSFDPDEEHIAAAGISKKIKIFD-FNAFMNESVGVHYPLVEMVNKSKLSCVC 772
Query: 321 --SANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
S K + S+ DG V+ +D + F T +S V S G D
Sbjct: 773 WNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWS-VDFSPSDPTKFVSGSDDC 831
Query: 379 EIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEP 438
+ +WSI + L + A V + FS + ++ LA S D V +D +
Sbjct: 832 SVKLWSINEKRSLGTIWS-PANVCCVQFS-SYSNHLLAFGSADYKVYCYDLRYVKTPWCT 889
Query: 439 IRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDL 486
+ + A+ D E I ++ D ++ + + +G G L
Sbjct: 890 LAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSL 937
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 60.9 bits (141), Expect = 3e-09
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Query: 260 EQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT 319
E +V K +GH ++ L +S D + +GG D K+ VWN + + F EH A V +
Sbjct: 282 EDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIA 341
Query: 320 CSANKKFFVSS---SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
S + ++S + D +R ++ T + + + S V + V + E + G
Sbjct: 342 WSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV-CNLVWSKNVNELVSTHGYS 400
Query: 377 VFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+I VW L L GH V LA SP + + + D T+R W+
Sbjct: 401 QNQIIVWKYPTMSKLATLTGHSYRVLYLAVSP--DGQTIVTGAGDETLRFWN 450
Score = 42.3 bits (95), Expect = 0.001
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
Q++VW++ + + GHS + LA SPDG +VTG D ++ WN
Sbjct: 403 QIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWN 450
Score = 34.3 bits (75), Expect = 0.30
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Query: 282 GLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
G H+ G G V++W+ T H+ V + S++ S S D ++ D+
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDI 278
Query: 342 TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
+ + + + S A+GG D ++FVW+ + + H A V
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWSSDNRELASGGND-NKLFVWNQHSTQPVLRFCEHAAAV 337
Query: 402 SSLAFSPTLTSTRLAS--ASWDGTVRLWD 428
++A+SP LAS + D +R W+
Sbjct: 338 KAIAWSPHHFGL-LASGGGTADRCIRFWN 365
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPD--GLHVVTGG-FDGKVKVWNTT 300
N +L VW S Q V++ H+ + +A+SP GL GG D ++ WNTT
Sbjct: 312 NDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTT 367
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 59.3 bits (137), Expect = 9e-09
Identities = 63/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 280 PDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
P+G +V+G D V VWN NG T H+ V+GV + + + VSSS+D T
Sbjct: 82 PEG-RLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVSSSVDQT---- 134
Query: 340 DLTRYRNFRTLTSPSLVQ--FSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGH 397
L R+RN + + S Q V SGE +G D + +W K L+ L GH
Sbjct: 135 -LKRWRNGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDA-SLKLWKGKTS--LQTLSGH 189
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEI 457
V LA P L SAS DG++RLW + EV E + S V G +
Sbjct: 190 TDTVRGLAVMPDL---GFLSASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHSSGLIV 245
Query: 458 AVSTLDGNITFFEPSTCEQT 477
+ S D + ++ C Q+
Sbjct: 246 SASE-DRHAKIWKDGVCVQS 264
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 39 LAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
L GS D + K+ + ++ +LSGHTD + G+ L ++ S +G + LW S
Sbjct: 165 LVSGSSDASLKL----WKGKTSLQTLSGHTDTVRGLAV-MPDLGFLSASHDGSIRLWALS 219
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 59.3 bits (137), Expect = 9e-09
Identities = 63/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 280 PDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
P+G +V+G D V VWN NG T H+ V+GV + + + VSSS+D T
Sbjct: 82 PEG-RLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVSSSVDQT---- 134
Query: 340 DLTRYRNFRTLTSPSLVQ--FSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGH 397
L R+RN + + S Q V SGE +G D + +W K L+ L GH
Sbjct: 135 -LKRWRNGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDA-SLKLWKGKTS--LQTLSGH 189
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEI 457
V LA P L SAS DG++RLW + EV E + S V G +
Sbjct: 190 TDTVRGLAVMPDL---GFLSASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHSSGLIV 245
Query: 458 AVSTLDGNITFFEPSTCEQT 477
+ S D + ++ C Q+
Sbjct: 246 SASE-DRHAKIWKDGVCVQS 264
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 39 LAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
L GS D + K+ + ++ +LSGHTD + G+ L ++ S +G + LW S
Sbjct: 165 LVSGSSDASLKL----WKGKTSLQTLSGHTDTVRGLAV-MPDLGFLSASHDGSIRLWALS 219
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSE------QYVMKQQGHSLDMTCLAYSPDGL 283
+ ++ + + FA + G +LVW+ ++ +Y+ +GHS ++TC A G
Sbjct: 212 VGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQ 269
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
+ +G D +K+W+ C +T +H TV+ + C K +SSSLDGT++ +
Sbjct: 270 MLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCW--DKCLISSSLDGTIKVW 323
Score = 33.9 bits (74), Expect = 0.40
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 370 CAAGGQDVFEIFVWSIKFG-KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
C G Q F + WS G ++ L GH + +A S +L S S DGT+R+WD
Sbjct: 103 CKRGEQCQF-LHSWSCFPGLAMVASLEGHNKELKGIALPEG--SDKLFSVSIDGTLRVWD 159
Query: 429 CIDREVQC-EPIRLNSDA 445
C QC I L+++A
Sbjct: 160 C--NSGQCVHSINLDAEA 175
Score = 29.9 bits (64), Expect = 6.5
Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 27/229 (11%)
Query: 210 FLHE---MPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ 266
FLH P + ++ +L + I++ P G F+ G L VW+ S Q V
Sbjct: 111 FLHSWSCFPGLAMVASLEGHNKELKGIAL-PEGSDKLFSVSIDGTLRVWDCNSGQCV--- 166
Query: 267 QGHSLDMTCLAYS--PDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS--- 321
HS+++ A S +G V G +K +N H A V G +
Sbjct: 167 --HSINLDAEAGSLISEGPWVFLG-LPNAIKAFNVQTS---QDLHLQAAGVVGQVNAMTI 220
Query: 322 ANKKFFVSSSLDGTVRCYDLTRYRN---FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
AN F +S G++ + T F+ LTS G+ +G D
Sbjct: 221 ANGMLFAGTS-SGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDK- 278
Query: 379 EIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
I +W + + + L H V+SL L S+S DGT+++W
Sbjct: 279 TIKMWDLNTLQCIMTLKQHTGTVTSLL----CWDKCLISSSLDGTIKVW 323
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 58.0 bits (134), Expect = 2e-08
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GH D+ + + P +V+GG D VK+W+T +G + H HK V V + N +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
+++S D ++ YD+ + ++ + S E+ +G D I W +
Sbjct: 326 LTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD-GSICHWIVGH 384
Query: 388 -GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDR 432
+E+ H+ V LA+ P L S S D T + W C +R
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHP--IGYLLCSGSNDHTTKFW-CRNR 427
Score = 49.2 bits (112), Expect = 1e-05
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 29/236 (12%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G+ +W QS + M Q H + + +S + ++V+G G +K W
Sbjct: 145 GEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKT 204
Query: 310 EHKATVSGVT-CSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGE 368
HK ++ ++ C + KF S S D TV+ +D T+ CV S
Sbjct: 205 AHKESIRDLSFCKTDLKF-CSCSDDTTVKVWDFTK----------------CVDESSLTG 247
Query: 369 FCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ G V I+FG ++ GH V S+ + P T + L S D V+LWD
Sbjct: 248 YIGKG--------VIEIRFG-VMPCNAGHGWDVKSVDWHP--TKSLLVSGGKDQLVKLWD 296
Query: 429 CIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRS 484
C + L V + +G + ++ D I ++ T ++ S G +
Sbjct: 297 TRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHT 352
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/94 (20%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W+ +S + + GH + + ++ +G ++T D +K+++ +F H
Sbjct: 294 LWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTK 353
Query: 314 TVSGVTC-SANKKFFVSSSLDGTVRCYDLTRYRN 346
V+ + ++++FVS S DG++ C+ + + N
Sbjct: 354 DVTSLAWHPCHEEYFVSGSSDGSI-CHWIVGHEN 386
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 26 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLIT 85
+V +DW LL G KD K+ + SL GH + ++ V + + L+T
Sbjct: 270 DVKSVDWHPTKSLLVSGGKDQLVKLWDTR--SGRELCSLHGHKNIVLSVKWNQNGNWLLT 327
Query: 86 VSRNGQLCLWE 96
S++ + L++
Sbjct: 328 ASKDQIIKLYD 338
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 57.2 bits (132), Expect = 4e-08
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 273 MTCLAYSP-DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK-KFFVSS 330
++CL+++ + H+ + ++G V VW+ T + + EH+ V S + VS
Sbjct: 423 LSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSG 482
Query: 331 SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALD-SSGEFCAAGGQDVFEIFVWSIK-FG 388
S D V+ + TR + + CV + S + A G D I + ++
Sbjct: 483 SDDCKVKVW-CTR-QEASVINIDMKANICCVKYNPGSSNYIAVGSAD-HHIHYYDLRNIS 539
Query: 389 KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
+ L V GH+ VS + F L++ LASAS D T+RLWD D
Sbjct: 540 QPLHVFSGHKKAVSYVKF---LSNNELASASTDSTLRLWDVKD 579
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 56.8 bits (131), Expect = 5e-08
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 262 YVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS 321
+V K GH ++ L +S D + +GG D ++ VWN + + EH A V +T S
Sbjct: 290 FVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWS 349
Query: 322 ANKKFFVSS---SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
++ ++S + D +R ++ T ++ + S V + + E + G
Sbjct: 350 PHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV-CNLAWSKNVNEIVSTHGYSQN 408
Query: 379 EIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEP 438
+I +W + L GH V LA SP + + + D T+R W+ P
Sbjct: 409 QIMLWKYPSMSKVATLTGHSMRVLYLATSP--DGQTIVTGAGDETLRFWNVFPSVKMQTP 466
Query: 439 IR 440
++
Sbjct: 467 VK 468
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
Q+++W++ S V GHS+ + LA SPDG +VTG D ++ WN
Sbjct: 409 QIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWN 456
Score = 40.3 bits (90), Expect = 0.005
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG---FDGKVKVWNTTNG 302
N QLLVW S+Q ++K H+ + + +SP ++ G D ++ WNTTNG
Sbjct: 318 NDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNG 375
Score = 39.9 bits (89), Expect = 0.006
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 272 DMTC-LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSS 330
D C + ++ +G ++ G G+V+VW+ T T H+ T +GV + N + S
Sbjct: 216 DSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQ-TRTGV-LAWNSRILSSG 273
Query: 331 SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
S D + +D+ +F + + + A+GG D ++ VW+ +
Sbjct: 274 SRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGND-NQLLVWNNHSQQP 332
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLAS--ASWDGTVRLWDCIDREVQCEPIRLNSDALQV 448
+ L H A V ++ +SP S+ LAS + D +R W+ + Q I S +
Sbjct: 333 ILKLTEHTAAVKAITWSPH-QSSLLASGGGTADRCIRFWNTTNGN-QLNSIDTGSQVCNL 390
Query: 449 AFRPDGEEIAVST 461
A+ + EI VST
Sbjct: 391 AWSKNVNEI-VST 402
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 30 LDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRN 89
L W+S R+L+ GS+D H + +++ + L GH ++ G+ + +L + +
Sbjct: 263 LAWNS--RILSSGSRDRNILQHDIR-VQSDFVSKLVGHKSEVCGLKWSHDDRELASGGND 319
Query: 90 GQLCLW 95
QL +W
Sbjct: 320 NQLLVW 325
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 56.0 bits (129), Expect = 9e-08
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 292 GKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
G V++W+ +G T E K+ V+ S + ++ ++ TV+ +D + ++
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYD 225
Query: 352 SPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLT 411
P ++ + + S +F AGG+D++ + ++ GK + GH PV + F+PT
Sbjct: 226 MPCNIESASLEPKSGNKF-VAGGEDMW-VRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGE 283
Query: 412 STRLASASWDGTVRLW 427
S AS S DGT+R+W
Sbjct: 284 S--YASGSEDGTIRIW 297
Score = 43.2 bits (97), Expect = 6e-04
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 169 KLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHT-LSISE 227
KL GD + + + K + A + ++ K L+TG + + ++ ++ T + S
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSP 145
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
I +++ I +C +IG + +W+ +S + V + S +T S DG ++ T
Sbjct: 146 GSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITT 204
Query: 288 GGFDGK-VKVWNTTNGFCFVTFHEHKATVSGVTC---SANKKFFVSSSLDGTVRCYDLTR 343
DG VK W+ N F V ++ + + S NK FV+ D VR +D
Sbjct: 205 A--DGSTVKFWD-ANHFGLVKSYDMPCNIESASLEPKSGNK--FVAGGEDMWVRLFDFHT 259
Query: 344 YRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
+ CV +GE A+G +D
Sbjct: 260 GKEI-GCNKGHHGPVHCVRFAPTGESYASGSED 291
Score = 37.5 bits (83), Expect = 0.032
Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 31/216 (14%)
Query: 268 GHSLDMTCLAYSP---DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
GHS + L YSP DG +++ D + + N G TF HK V N
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
S+S D + + +D + +V+ +C A ++ GG
Sbjct: 74 LRAASASADFSAKLWDALTGDVLHSFEHKHIVR-AC-AFSQDTKYLITGG---------- 121
Query: 385 IKFGKLLEV--LGGHEAPVSSLAFSP----TLT-----STRLASASWDGTVRLWDCIDRE 433
F K+L V L +AP + + SP TLT T L+S + G VRLWD +
Sbjct: 122 --FEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGK 179
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFF 469
+ + + S DG I +T DG+ F
Sbjct: 180 I-VQTLETKSPVTSAEVSQDGRYI--TTADGSTVKF 212
Score = 35.1 bits (77), Expect = 0.17
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 14/207 (6%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT-FHEHKATVSGVTCSANKKFF 327
H + A+S D +++TGGF+ ++V++ T + ++ +T +
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTI 160
Query: 328 VSSSLD-GTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
+SS D G VR +D+ + +TL + S V + V+ D A G F W
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKF----WDAN 216
Query: 387 FGKLLEVLGGHEAP--VSSLAFSPTLTSTRLASASWDGTVRLWDC-IDREVQCEPIRLNS 443
L++ ++ P + S + P + + + D VRL+D +E+ C +
Sbjct: 217 HFGLVK---SYDMPCNIESASLEPK-SGNKFVAGGEDMWVRLFDFHTGKEIGCNKGH-HG 271
Query: 444 DALQVAFRPDGEEIAVSTLDGNITFFE 470
V F P GE A + DG I ++
Sbjct: 272 PVHCVRFAPTGESYASGSEDGTIRIWQ 298
Score = 34.7 bits (76), Expect = 0.23
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 579 GGNVNIRLPGVKTGDMADRNVKPEVRVYCVRFSPTGESFAVAATEG 624
G ++ +RL TG N V+CVRF+PTGES+A + +G
Sbjct: 247 GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDG 292
Score = 32.7 bits (71), Expect = 0.92
Identities = 22/124 (17%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 176 GDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISV 235
G ++ + K +T+ + ++ + + T S + F + L+ + + + I S S+
Sbjct: 178 GKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFW-DANHFGLVKSYDMPCN-IESASL 235
Query: 236 SPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVK 295
P A + ++++ + + + +GH + C+ ++P G +G DG ++
Sbjct: 236 EPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIR 295
Query: 296 VWNT 299
+W T
Sbjct: 296 IWQT 299
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 56.0 bits (129), Expect = 9e-08
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 292 GKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
G V++W+ +G T E K+ V+ S + ++ ++ TV+ +D + ++
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYD 225
Query: 352 SPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLT 411
P ++ + + SGE AGG+D++ + V+ G+ + GH PV + F+PT
Sbjct: 226 MPCNIESASLE-PKSGEKFVAGGEDMW-VRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGL 283
Query: 412 STRLASASWDGTVRLW 427
S AS S DGT+R+W
Sbjct: 284 S--YASGSEDGTIRIW 297
Score = 40.3 bits (90), Expect = 0.005
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 169 KLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHT-LSISE 227
KL GD + + + K + A + ++ K L+TG + + +M ++ T + S
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
I +++ I +C +IG + +W+ +S + V + S +T S DG ++ T
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITT 204
Query: 288 GGFDGK-VKVWNTTNGFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGTVRCYD 340
DG VK W+ N F V ++ + + + FV+ D VR +D
Sbjct: 205 A--DGSTVKFWD-ANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFD 256
Score = 39.1 bits (87), Expect = 0.011
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 9/205 (4%)
Query: 268 GHSLDMTCLAYSP---DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
GHS + L YSP DG +++ D + N G TF HK V N
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
S+S D + + +D + +V+ +C + + G + + +F +
Sbjct: 74 LRAASASADFSAKLWDALTGDVLHSFEHKHIVR-ACAFSEDTKSLLTGGFEKILRVFDMN 132
Query: 385 IKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD 444
EV + +L + + T L+S + G VRLWD ++ + + S
Sbjct: 133 RLDAPPTEV-DKSPGSIRTLTWLHS-DQTILSSCTDIGGVRLWDVRSGKI-VQTLETKSP 189
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFF 469
DG I +T DG+ F
Sbjct: 190 VTSAEVSQDGRYI--TTADGSTVKF 212
Score = 39.1 bits (87), Expect = 0.011
Identities = 25/125 (20%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 176 GDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISV 235
G ++ + K +T+ + ++ + + T S + F + L+ + + + I S S+
Sbjct: 178 GKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFW-DANHFGLVKSYDMPCN-IESASL 235
Query: 236 SPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVK 295
P A + V+++ + + + +GH + C+ ++P GL +G DG ++
Sbjct: 236 EPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIR 295
Query: 296 VWNTT 300
+W TT
Sbjct: 296 IWQTT 300
Score = 33.9 bits (74), Expect = 0.40
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 27/253 (10%)
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ 447
G + GH+ V S + R ASAS D + +LWD + +V
Sbjct: 51 GDWIGTFEGHKGAVWSSCLDNN--ALRAASASADFSAKLWDALTGDV-LHSFEHKHIVRA 107
Query: 448 VAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAF 507
AF D + + + + F+ + + + +S GS R T L + QT+L +
Sbjct: 108 CAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP-GSIRTLTWLHSDQTILSS--- 163
Query: 508 TTICYSADGTCILGGGNSKNVCLYSVKDSVLIK------KFVVTENRSLDAVNDFVNRRN 561
C G + + K V K V +++ T + S D N
Sbjct: 164 ---CTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWD-ANHFG 219
Query: 562 LTEFGNMALLEEREDLE----------GGNVNIRLPGVKTGDMADRNVKPEVRVYCVRFS 611
L + +M E LE G ++ +R+ TG+ N V+CVRF+
Sbjct: 220 LVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFT 279
Query: 612 PTGESFAVAATEG 624
PTG S+A + +G
Sbjct: 280 PTGLSYASGSEDG 292
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 56.0 bits (129), Expect = 9e-08
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 292 GKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
G V++W+ +G T E K+ V+ S + ++ ++ TV+ +D + ++
Sbjct: 168 GGVRLWDVRSGKIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYD 225
Query: 352 SPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLT 411
P ++ + + SGE AGG+D++ + V+ G+ + GH PV + F+PT
Sbjct: 226 MPCNIESASLE-PKSGEKFVAGGEDMW-VRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGL 283
Query: 412 STRLASASWDGTVRLW 427
S AS S DGT+R+W
Sbjct: 284 S--YASGSEDGTIRIW 297
Score = 40.3 bits (90), Expect = 0.005
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 169 KLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHT-LSISE 227
KL GD + + + K + A + ++ K L+TG + + +M ++ T + S
Sbjct: 86 KLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
I +++ I +C +IG + +W+ +S + V + S +T S DG ++ T
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITT 204
Query: 288 GGFDGK-VKVWNTTNGFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGTVRCYD 340
DG VK W+ N F V ++ + + + FV+ D VR +D
Sbjct: 205 A--DGSTVKFWD-ANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFD 256
Score = 39.1 bits (87), Expect = 0.011
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 9/205 (4%)
Query: 268 GHSLDMTCLAYSP---DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
GHS + L YSP DG +++ D + N G TF HK V N
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
S+S D + + +D + +V+ +C + + G + + +F +
Sbjct: 74 LRAASASADFSAKLWDALTGDVLHSFEHKHIVR-ACAFSEDTKSLLTGGFEKILRVFDMN 132
Query: 385 IKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD 444
EV + +L + + T L+S + G VRLWD ++ + + S
Sbjct: 133 RLDAPPTEV-DKSPGSIRTLTWLHS-DQTILSSCTDIGGVRLWDVRSGKI-VQTLETKSP 189
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFF 469
DG I +T DG+ F
Sbjct: 190 VTSAEVSQDGRYI--TTADGSTVKF 212
Score = 39.1 bits (87), Expect = 0.011
Identities = 25/125 (20%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 176 GDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISV 235
G ++ + K +T+ + ++ + + T S + F + L+ + + + I S S+
Sbjct: 178 GKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFW-DANHFGLVKSYDMPCN-IESASL 235
Query: 236 SPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVK 295
P A + V+++ + + + +GH + C+ ++P GL +G DG ++
Sbjct: 236 EPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIR 295
Query: 296 VWNTT 300
+W TT
Sbjct: 296 IWQTT 300
Score = 33.9 bits (74), Expect = 0.40
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 27/253 (10%)
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ 447
G + GH+ V S + R ASAS D + +LWD + +V
Sbjct: 51 GDWIGTFEGHKGAVWSSCLDNN--ALRAASASADFSAKLWDALTGDV-LHSFEHKHIVRA 107
Query: 448 VAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAF 507
AF D + + + + F+ + + + +S GS R T L + QT+L +
Sbjct: 108 CAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP-GSIRTLTWLHSDQTILSS--- 163
Query: 508 TTICYSADGTCILGGGNSKNVCLYSVKDSVLIK------KFVVTENRSLDAVNDFVNRRN 561
C G + + K V K V +++ T + S D N
Sbjct: 164 ---CTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWD-ANHFG 219
Query: 562 LTEFGNMALLEEREDLE----------GGNVNIRLPGVKTGDMADRNVKPEVRVYCVRFS 611
L + +M E LE G ++ +R+ TG+ N V+CVRF+
Sbjct: 220 LVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFT 279
Query: 612 PTGESFAVAATEG 624
PTG S+A + +G
Sbjct: 280 PTGLSYASGSEDG 292
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 55.6 bits (128), Expect = 1e-07
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 260 EQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT 319
E +V K GH ++ L +S D + +GG D ++ VWN + + + EH A V +
Sbjct: 325 EDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIA 384
Query: 320 CSANKKFFVSS---SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
S + ++S + D +R ++ T + ++ + S V + + E + G
Sbjct: 385 WSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQV-CNLAWSKNVNELVSTHGYS 443
Query: 377 VFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+I VW + L GH V LA SP + + + D T+R W+
Sbjct: 444 QNQIIVWKYPTMSKIATLTGHTYRVLYLAVSP--DGQTIVTGAGDETLRFWN 493
Score = 41.9 bits (94), Expect = 0.001
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
Q++VW++ + + GH+ + LA SPDG +VTG D ++ WN
Sbjct: 446 QIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWN 493
Score = 35.9 bits (79), Expect = 0.098
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSP--DGLHVVTGG-FDGKVKVWNTT 300
N +L VW S Q V+K H+ + +A+SP GL GG D ++ WNTT
Sbjct: 355 NDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTT 410
Score = 35.1 bits (77), Expect = 0.17
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 272 DMTC-LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSS 330
D C + ++ G H+ G GKV++W+ + T H+ V + ++ S
Sbjct: 253 DSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSS--VLSSG 310
Query: 331 SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
S D ++ D+ + + + + + A+GG D +FVW+ +
Sbjct: 311 SRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGND-NRLFVWNQHSTQP 369
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLAS--ASWDGTVRLWD 428
+ H A V ++A+SP + LAS + D +R W+
Sbjct: 370 VLKYSEHTAAVKAIAWSPHVHGL-LASGGGTADRCIRFWN 408
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 424 VRLWD-CIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEG 482
V LW+ C + + + V + G +AV T G + ++ S C++T ++EG
Sbjct: 233 VYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEG 292
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 55.2 bits (127), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 218 NLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLA 277
N + + S ++ S S G +A A + ++ +W ++ Q + H+ +T +
Sbjct: 499 NEVSCIRKSASKVICCSFSYDGKLLASAGHD-KKVFIWNMETLQVESTPEEHAHIITDVR 557
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGT 335
+ P+ + T FD +K+W+ ++ G+ T H A V + K + S +
Sbjct: 558 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 617
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+R +D+ + + V+F +G+F AA ++ IF K + +
Sbjct: 618 IRFWDINASCVRAVKGASTQVRFQ----PRTGQFLAAASENTVSIFDIE-NNNKRVNIFK 672
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH + V S+ +SP +AS S D V+LW + E + V F P
Sbjct: 673 GHSSNVHSVCWSP--NGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 729
Query: 456 EIAV 459
++ V
Sbjct: 730 DLLV 733
Score = 46.0 bits (104), Expect = 9e-05
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 12/242 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVN-LIHTLSISEHRISSISVSPPGDWIAFAC 246
+T V++ + L T + + D + T+S + SI P + +C
Sbjct: 553 ITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSC 612
Query: 247 PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ + W+ + V +G S T + + P + + V +++ N V
Sbjct: 613 DSNNDIRFWDINAS-CVRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 668
Query: 307 T-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS 365
F H + V V S N + S S D V+ + L+ L++ S V S
Sbjct: 669 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPS 727
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ GG E+ W+ K + V GHE +S+LA SP ++ +ASAS D +V+
Sbjct: 728 YPDLLVIGGYQAIEL--WNTMENKCMTV-AGHECVISALAQSP--STGVVASASHDKSVK 782
Query: 426 LW 427
+W
Sbjct: 783 IW 784
Score = 32.7 bits (71), Expect = 0.92
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
LASA D V +W+ +V+ P V FRP+ ++A S+ D I ++ S
Sbjct: 523 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 580
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 5 VHFTGEYRPFIMKRV--FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMY 62
VH T +PF V +K+ +V C +S +LLA D I +E L+
Sbjct: 488 VH-TETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQ--VES 544
Query: 63 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
+ H I V F S L T S + + +W+AS
Sbjct: 545 TPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 580
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 218 NLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLA 277
N + + S ++ S S G +A A + ++ +W ++ Q + H+ +T +
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHD-KKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGT 335
+ P+ + T FD +K+W+ ++ G+ T H A V + K + S +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+R +D+ + + V+F +G+F AA ++ IF K + +
Sbjct: 620 IRFWDINASCVRAVKGASTQVRFQ----PRTGQFLAAASENTVSIFDIE-NNNKRVNIFK 674
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH + V S+ +SP +AS S D V+LW + E + V F P
Sbjct: 675 GHSSNVHSVCWSP--NGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 456 EIAV 459
++ V
Sbjct: 732 DLLV 735
Score = 46.0 bits (104), Expect = 9e-05
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 12/242 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVN-LIHTLSISEHRISSISVSPPGDWIAFAC 246
+T V++ + L T + + D + T+S + SI P + +C
Sbjct: 555 ITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSC 614
Query: 247 PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ + W+ + V +G S T + + P + + V +++ N V
Sbjct: 615 DSNNDIRFWDINAS-CVRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 307 T-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS 365
F H + V V S N + S S D V+ + L+ L++ S V S
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPS 729
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ GG E+ W+ K + V GHE +S+LA SP ++ +ASAS D +V+
Sbjct: 730 YPDLLVIGGYQAIEL--WNTMENKCMTV-AGHECVISALAQSP--STGVVASASHDKSVK 784
Query: 426 LW 427
+W
Sbjct: 785 IW 786
Score = 32.7 bits (71), Expect = 0.92
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
LASA D V +W+ +V+ P V FRP+ ++A S+ D I ++ S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 5 VHFTGEYRPFIMKRV--FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMY 62
VH T +PF V +K+ +V C +S +LLA D I +E L+
Sbjct: 490 VH-TETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQ--VES 546
Query: 63 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
+ H I V F S L T S + + +W+AS
Sbjct: 547 TPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 218 NLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLA 277
N + + S ++ S S G +A A + ++ +W ++ Q + H+ +T +
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHD-KKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGT 335
+ P+ + T FD +K+W+ ++ G+ T H A V + K + S +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+R +D+ + + V+F +G+F AA ++ IF K + +
Sbjct: 620 IRFWDINASCVRAVKGASTQVRFQ----PRTGQFLAAASENTVSIFDIE-NNNKRVNIFK 674
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH + V S+ +SP +AS S D V+LW + E + V F P
Sbjct: 675 GHSSNVHSVCWSP--NGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 456 EIAV 459
++ V
Sbjct: 732 DLLV 735
Score = 46.0 bits (104), Expect = 9e-05
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 12/242 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVN-LIHTLSISEHRISSISVSPPGDWIAFAC 246
+T V++ + L T + + D + T+S + SI P + +C
Sbjct: 555 ITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSC 614
Query: 247 PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ + W+ + V +G S T + + P + + V +++ N V
Sbjct: 615 DSNNDIRFWDINAS-CVRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 307 T-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS 365
F H + V V S N + S S D V+ + L+ L++ S V S
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPS 729
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ GG E+ W+ K + V GHE +S+LA SP ++ +ASAS D +V+
Sbjct: 730 YPDLLVIGGYQAIEL--WNTMENKCMTV-AGHECVISALAQSP--STGVVASASHDKSVK 784
Query: 426 LW 427
+W
Sbjct: 785 IW 786
Score = 32.7 bits (71), Expect = 0.92
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
LASA D V +W+ +V+ P V FRP+ ++A S+ D I ++ S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 5 VHFTGEYRPFIMKRV--FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMY 62
VH T +PF V +K+ +V C +S +LLA D I +E L+
Sbjct: 490 VH-TETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQ--VES 546
Query: 63 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
+ H I V F S L T S + + +W+AS
Sbjct: 547 TPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 218 NLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLA 277
N + + S ++ S S G +A A + ++ +W ++ Q + H+ +T +
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHD-KKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGT 335
+ P+ + T FD +K+W+ ++ G+ T H A V + K + S +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+R +D+ + + V+F +G+F AA ++ IF K + +
Sbjct: 620 IRFWDINASCVRAVKGASTQVRFQ----PRTGQFLAAASENTVSIFDIE-NNNKRVNIFK 674
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH + V S+ +SP +AS S D V+LW + E + V F P
Sbjct: 675 GHSSNVHSVCWSP--NGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 456 EIAV 459
++ V
Sbjct: 732 DLLV 735
Score = 46.0 bits (104), Expect = 9e-05
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 12/242 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVN-LIHTLSISEHRISSISVSPPGDWIAFAC 246
+T V++ + L T + + D + T+S + SI P + +C
Sbjct: 555 ITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSC 614
Query: 247 PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ + W+ + V +G S T + + P + + V +++ N V
Sbjct: 615 DSNNDIRFWDINAS-CVRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 307 T-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS 365
F H + V V S N + S S D V+ + L+ L++ S V S
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPS 729
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ GG E+ W+ K + V GHE +S+LA SP ++ +ASAS D +V+
Sbjct: 730 YPDLLVIGGYQAIEL--WNTMENKCMTV-AGHECVISALAQSP--STGVVASASHDKSVK 784
Query: 426 LW 427
+W
Sbjct: 785 IW 786
Score = 32.7 bits (71), Expect = 0.92
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
LASA D V +W+ +V+ P V FRP+ ++A S+ D I ++ S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 5 VHFTGEYRPFIMKRV--FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMY 62
VH T +PF V +K+ +V C +S +LLA D I +E L+
Sbjct: 490 VH-TETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQ--VES 546
Query: 63 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
+ H I V F S L T S + + +W+AS
Sbjct: 547 TPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 218 NLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLA 277
N + + S ++ S S G +A A + ++ +W ++ Q + H+ +T +
Sbjct: 501 NEVSCIRKSASKVICCSFSYDGKLLASAGHD-KKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANK-KFFVSSSLDGT 335
+ P+ + T FD +K+W+ ++ G+ T H A V + K + S +
Sbjct: 560 FRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNND 619
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+R +D+ + + V+F +G+F AA ++ IF K + +
Sbjct: 620 IRFWDINASCVRAVKGASTQVRFQ----PRTGQFLAAASENTVSIFDIE-NNNKRVNIFK 674
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH + V S+ +SP +AS S D V+LW + E + V F P
Sbjct: 675 GHSSNVHSVCWSP--NGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 456 EIAV 459
++ V
Sbjct: 732 DLLV 735
Score = 46.0 bits (104), Expect = 9e-05
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 12/242 (4%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVN-LIHTLSISEHRISSISVSPPGDWIAFAC 246
+T V++ + L T + + D + T+S + SI P + +C
Sbjct: 555 ITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSC 614
Query: 247 PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFV 306
+ + W+ + V +G S T + + P + + V +++ N V
Sbjct: 615 DSNNDIRFWDINAS-CVRAVKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 307 T-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS 365
F H + V V S N + S S D V+ + L+ L++ S V S
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPS 729
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
+ GG E+ W+ K + V GHE +S+LA SP ++ +ASAS D +V+
Sbjct: 730 YPDLLVIGGYQAIEL--WNTMENKCMTV-AGHECVISALAQSP--STGVVASASHDKSVK 784
Query: 426 LW 427
+W
Sbjct: 785 IW 786
Score = 32.7 bits (71), Expect = 0.92
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
LASA D V +W+ +V+ P V FRP+ ++A S+ D I ++ S
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Score = 31.5 bits (68), Expect = 2.1
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 5 VHFTGEYRPFIMKRV--FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMY 62
VH T +PF V +K+ +V C +S +LLA D I +E L+
Sbjct: 490 VH-TETSKPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQ--VES 546
Query: 63 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 98
+ H I V F S L T S + + +W+AS
Sbjct: 547 TPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 54.8 bits (126), Expect = 2e-07
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 263 VMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSA 322
VM +GH+ D+ L +SPD + +G D V +WN G C H + V GVT
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP 170
Query: 323 NKKFFVSSSLDGTV 336
F S S D TV
Sbjct: 171 IGSFIASQSDDKTV 184
Score = 32.3 bits (70), Expect = 1.2
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 264 MKQQGHSLDMTCLAYSPDGLHVVTGGFDGKV---KVWNT-TNGFCFVTFHEHKATVSGVT 319
+K +G L + + P+G TGG D K + N T T +H +V+ V
Sbjct: 9 VKHEG--LQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVR 66
Query: 320 CSANKKFFVSSSLDGTVRCYDL---TRYRNFRTLTSPSLVQFSCV---------ALD--- 364
+ N ++ S S D ++ ++ + F + +P + + V +D
Sbjct: 67 WAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNW 126
Query: 365 SSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTV 424
S + A G + +W+++ G VL GH + V + + P + +AS S D TV
Sbjct: 127 SPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP--IGSFIASQSDDKTV 184
Query: 425 RLWDCID 431
+W D
Sbjct: 185 IIWRTSD 191
Score = 31.5 bits (68), Expect = 2.1
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 389 KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDAL-- 446
K + L GH A V L +SP + LAS S D TV +W+ R C + +L
Sbjct: 109 KAVMTLRGHTADVVDLNWSPD--DSMLASGSLDNTVHIWNM--RTGMCTTVLRGHLSLVK 164
Query: 447 QVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGR--SDLGS 488
V + P G IA + D + + S +G LGS
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGS 208
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 54.8 bits (126), Expect = 2e-07
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 222 TLSISEHRISSISVSPPGDWIAFAC-PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSP 280
T+ + ++ + ++P ++A AC P+I +L S Q VM H+ ++ + +
Sbjct: 30 TIQYPDSHVNRLEITPDKHYLAAACNPHI-RLFDVNSNSPQPVMTYDSHTNNVMAVGFQC 88
Query: 281 DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
D + +G DG VK+W+ C + E A V+ V N+ +S +G +R +D
Sbjct: 89 DAKWMYSGSEDGTVKIWDLRAPGCQKEY-ESVAAVNTVVLHPNQTELISGDQNGNIRVWD 147
Query: 341 LTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL-------LEV 393
L L + + G A + +VW + GK L
Sbjct: 148 LRANSCSCELVPEVDTAVRSLTVMWDGTMVVA-ANNRGTCYVWRLLRGKQTMTEFEPLHK 206
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
L H + SP + LA+AS D TV++W+
Sbjct: 207 LQAHNGHILKCLLSP--ANKYLATASSDKTVKIWN 239
Score = 39.9 bits (89), Expect = 0.006
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTF- 308
G + +W+ ++ K+ + + P+ +++G +G ++VW+ C
Sbjct: 100 GTVKIWDLRAPG-CQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELV 158
Query: 309 HEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSP-SLVQ------FSCV 361
E V +T + V+++ GT + L R + T P +Q C+
Sbjct: 159 PEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCL 218
Query: 362 ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWD 421
L + ++ A D + +W++ KL +VL GH+ V FS + L +AS D
Sbjct: 219 -LSPANKYLATASSDK-TVKIWNVDGFKLEKVLTGHQRWVWDCVFS--VDGEFLVTASSD 274
Query: 422 GTVRLW 427
T RLW
Sbjct: 275 MTARLW 280
Score = 39.1 bits (87), Expect = 0.011
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Query: 281 DGLHVVTGGFDGKVKVWNTTNGFCFVTFHE-------HKATVSGVTCSANKKFFVSSSLD 333
DG VV G VW G +T E H + S K+ ++S D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 334 GTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEV 393
TV+ +++ ++ + LT + CV GEF D+ +WS+ GK ++V
Sbjct: 233 KTVKIWNVDGFKLEKVLTGHQRWVWDCV-FSVDGEFLVTASSDM-TARLWSMPAGKEVKV 290
Query: 394 LGGH 397
GH
Sbjct: 291 YQGH 294
Score = 36.7 bits (81), Expect = 0.056
Identities = 28/154 (18%), Positives = 63/154 (40%), Gaps = 6/154 (3%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
+ T +D ++ W G C+ T + V+ + + +K + ++++ + +R +D+
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHY-LAAACNPHIRLFDVNSN 66
Query: 345 RNFRTLTSPSLVQ-FSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSS 403
+T S V ++ +G +D + +W ++ + A V++
Sbjct: 67 SPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDG-TVKIWDLRAPGCQKEYES-VAAVNT 124
Query: 404 LAFSPTLTSTRLASASWDGTVRLWDCIDREVQCE 437
+ P T L S +G +R+WD CE
Sbjct: 125 VVLHPN--QTELISGDQNGNIRVWDLRANSCSCE 156
Score = 30.3 bits (65), Expect = 4.9
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 214 MPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDM 273
M + +H L I +SP ++A A + + +W + GH +
Sbjct: 198 MTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD-KTVKIWNVDGFKLEKVLTGHQRWV 256
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATV 315
+S DG +VT D ++W+ G + HKATV
Sbjct: 257 WDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATV 299
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 54.4 bits (125), Expect = 3e-07
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 269 HSLD-MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTF-HEHKATVSGVTCSANKKF 326
H +D ++ LA S DG + + +D +K+W TT+ C +F + H ++ V S N
Sbjct: 163 HHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDI 222
Query: 327 FVSSSLDGTVRCYDLT-RYRNFRTLTSPSLVQF--------SCVALD-SSGEFCAAGGQD 376
+ SS D ++ + N + SLV + +AL ++G +GG D
Sbjct: 223 YTGSS-DQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 377 VFEIFVWSIKFGKLLEVLG---GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
I VW G + V+G GH V LA + S L S S D TVRLW C ++
Sbjct: 282 G-SILVWERDDGGDIVVVGMLRGHTESVLCLA----VVSDILCSGSADKTVRLWKCSAKD 336
Query: 434 VQC 436
C
Sbjct: 337 YSC 339
Score = 29.9 bits (64), Expect = 6.5
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEE 456
H VS LA S T L S SWD T+++W D + + DA+ + +
Sbjct: 164 HVDAVSGLALSRD--GTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD 221
Query: 457 IAVSTLDGNITFFEPSTCEQ 476
I + D I + + E+
Sbjct: 222 IYTGSSDQRIKVWRKNINEE 241
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 54.4 bits (125), Expect = 3e-07
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT-CSANKKFFVSSSLDGTVRCYDLTR 343
V + F+G V+VW+ EH+ V + SA+ S S DG+V+ + + +
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 344 YRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVWSIKFGKL-LEVLGGHEAPV 401
+ T+ + + CV S +G A G D +++ + ++ KL L + GH V
Sbjct: 609 GVSIGTIKTKA--NICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTV 665
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
S + F + S+ L S+S D T++LWD
Sbjct: 666 SYVRF---VDSSTLVSSSTDNTLKLWD 689
Score = 34.3 bits (75), Expect = 0.30
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGFDGKVKVWNTTNGFCFVTF 308
G + VW+ Q V + + H + + YS D + +G DG VK+W+ G T
Sbjct: 556 GVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Query: 309 HEHKATVSGVTC-SANKKFFVSSSLDGTVRCYDL 341
+ KA + V S + S D V YDL
Sbjct: 616 -KTKANICCVQFPSETGRSLAFGSADHKVYYYDL 648
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 54.4 bits (125), Expect = 3e-07
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT-CSANKKFFVSSSLDGTVRCYDLTR 343
V + F+G V+VW+ EH+ V + SA+ S S DG+V+ + + +
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 344 YRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVWSIKFGKL-LEVLGGHEAPV 401
+ T+ + + CV S +G A G D +++ + ++ KL L + GH V
Sbjct: 609 GVSIGTIKTKA--NICCVQFPSETGRSLAFGSAD-HKVYYYDLRNPKLPLCTMIGHHKTV 665
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
S + F + S+ L S+S D T++LWD
Sbjct: 666 SYVRF---VDSSTLVSSSTDNTLKLWD 689
Score = 34.3 bits (75), Expect = 0.30
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGFDGKVKVWNTTNGFCFVTF 308
G + VW+ Q V + + H + + YS D + +G DG VK+W+ G T
Sbjct: 556 GVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 615
Query: 309 HEHKATVSGVTC-SANKKFFVSSSLDGTVRCYDL 341
+ KA + V S + S D V YDL
Sbjct: 616 -KTKANICCVQFPSETGRSLAFGSADHKVYYYDL 648
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 54.0 bits (124), Expect = 3e-07
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 266 QQGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFV-TFHEHKATVSGVTCSAN 323
Q GH+ D+ ++ S + ++G D ++W+T V TFH H+ V+ V +
Sbjct: 138 QSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
Query: 324 KKFFVSSSLDGTVRCYDLT---RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEI 380
F + S DGT R YD+ + + ++ + +A SG AG
Sbjct: 198 GYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTC 257
Query: 381 FVWSIKFGKLLEVLG----GHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+VW G+++ LG H +S L S + L + SWD +++W
Sbjct: 258 YVWDTLLGEVVLDLGLQQDSHRNRISCLGLS--ADGSALCTGSWDSNLKIW 306
Score = 37.5 bits (83), Expect = 0.032
Identities = 61/262 (23%), Positives = 88/262 (33%), Gaps = 21/262 (8%)
Query: 271 LDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSS 330
L + L ++P+ +V+ DG++ VWN A V S N +
Sbjct: 4 LQVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACG 63
Query: 331 SLDGTVRCYDLTRYRN-------FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVW 383
LD + L+ + R LT C + + D I +W
Sbjct: 64 GLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCI-LW 122
Query: 384 SIKFGKLLEVLGG-----HEAPVSSLAFSPTLTSTRLASASWDGTVRLWD--CIDREVQC 436
+ G V GG H A V S++ S + S S D T RLWD R V+
Sbjct: 123 DVTTGLKTSVFGGEFQSGHTADVLSVSISGS-NPNWFISGSCDSTARLWDTRAASRAVRT 181
Query: 437 EPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDL- 495
D V F PDG + DG ++ T Q + D G T +
Sbjct: 182 FHGH-EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD-GENGPVTSIA 239
Query: 496 --VTPQTLLKTKAFTTICYSAD 515
V+ + L A CY D
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWD 261
Score = 37.1 bits (82), Expect = 0.043
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 232 SISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVVTGGF 290
SIS S P +I+ +C + +L W+ ++ ++ GH D+ + + PDG TG
Sbjct: 149 SISGSNPNWFISGSCDSTARL--WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 206
Query: 291 DGKVKVWNTTNGFCFVTFHEH 311
DG ++++ G + H
Sbjct: 207 DGTCRLYDIRTGHQLQVYQPH 227
Score = 35.9 bits (79), Expect = 0.098
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 401 VSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLN-SDALQVAFRPDGEEIAV 459
V SL ++P R+ SAS DG + +W+ + + + I+L + + AF P+G+ +A
Sbjct: 6 VYSLDWTPE--RNRIVSASQDGRLIVWNALTSQ-KTHAIKLPCAWVMTCAFSPNGQSVAC 62
Query: 460 STLDGNITFFE-PSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTC 518
LD + F ST ++ G+V L R V+ + + I S D TC
Sbjct: 63 GGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRG---YVSCCQYVPNEDAHLITSSGDQTC 119
Query: 519 IL 520
IL
Sbjct: 120 IL 121
Score = 34.3 bits (75), Expect = 0.30
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVM----KQQGHSLDMTCLAYSPDGLHV 285
++SI+ S G + + VW+ + V+ +Q H ++CL S DG +
Sbjct: 235 VTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSAL 294
Query: 286 VTGGFDGKVKVW 297
TG +D +K+W
Sbjct: 295 CTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 54.0 bits (124), Expect = 3e-07
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 266 QQGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFV-TFHEHKATVSGVTCSAN 323
Q GH+ D+ ++ S + ++G D ++W+T V TFH H+ V+ V +
Sbjct: 200 QSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Query: 324 KKFFVSSSLDGTVRCYDLT---RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEI 380
F + S DGT R YD+ + + ++ + +A SG AG
Sbjct: 260 GYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTC 319
Query: 381 FVWSIKFGKLLEVLG----GHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+VW G+++ LG H +S L S + L + SWD +++W
Sbjct: 320 YVWDTLLGEVVLDLGLQQDSHRNRISCLGLS--ADGSALCTGSWDSNLKIW 368
Score = 41.9 bits (94), Expect = 0.001
Identities = 63/266 (23%), Positives = 91/266 (34%), Gaps = 21/266 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
QGH+ + L ++P+ +V+ DG++ VWN A V S N +
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQS 121
Query: 327 FVSSSLDGTVRCYDLTRYRN-------FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFE 379
LD + L+ + R LT C + + D
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 380 IFVWSIKFGKLLEVLGG-----HEAPVSSLAFSPTLTSTRLASASWDGTVRLWD--CIDR 432
I +W + G V GG H A V S++ S + S S D T RLWD R
Sbjct: 182 I-LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGS-NPNWFISGSCDSTARLWDTRAASR 239
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAE 492
V+ D V F PDG + DG ++ T Q + D G
Sbjct: 240 AVRTFHGH-EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD-GENGPV 297
Query: 493 TDL---VTPQTLLKTKAFTTICYSAD 515
T + V+ + L A CY D
Sbjct: 298 TSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 41.5 bits (93), Expect = 0.002
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLN-SDALQVAFRP 452
L GH V SL ++P R+ SAS DG + +W+ + + + I+L + + AF P
Sbjct: 61 LQGHTGKVYSLDWTPE--RNRIVSASQDGRLIVWNALTSQ-KTHAIKLPCAWVMTCAFSP 117
Query: 453 DGEEIAVSTLDGNITFFE-PSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTIC 511
+G+ +A LD + F ST ++ G+V L R V+ + + I
Sbjct: 118 NGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRG---YVSCCQYVPNEDAHLIT 174
Query: 512 YSADGTCIL 520
S D TCIL
Sbjct: 175 SSGDQTCIL 183
Score = 37.1 bits (82), Expect = 0.043
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 232 SISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVVTGGF 290
SIS S P +I+ +C + +L W+ ++ ++ GH D+ + + PDG TG
Sbjct: 211 SISGSNPNWFISGSCDSTARL--WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 291 DGKVKVWNTTNGFCFVTFHEH 311
DG ++++ G + H
Sbjct: 269 DGTCRLYDIRTGHQLQVYQPH 289
Score = 35.9 bits (79), Expect = 0.098
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 18/227 (7%)
Query: 216 DVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMK-QQGHSLDMT 274
D+ TL ++ S+ +P + I A + G+L+VW + Q + + MT
Sbjct: 54 DLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD-GRLIVWNALTSQKTHAIKLPCAWVMT 112
Query: 275 CLAYSPDGLHVVTGGFDGKVKVWNTT-----NGFCFVT--FHEHKATVSGVTCSANK-KF 326
C A+SP+G V GG D +++ + +G V+ H+ VS N+
Sbjct: 113 C-AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAH 171
Query: 327 FVSSSLDGTVRCYDLTRYRNFRT----LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFV 382
++SS D T +D+T S V++ S G +
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
Query: 383 WSIK-FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
W + + + GHE V+++ F P R + S DGT RL+D
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFP--DGYRFGTGSDDGTCRLYD 276
Score = 34.3 bits (75), Expect = 0.30
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVM----KQQGHSLDMTCLAYSPDGLHV 285
++SI+ S G + + VW+ + V+ +Q H ++CL S DG +
Sbjct: 297 VTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSAL 356
Query: 286 VTGGFDGKVKVW 297
TG +D +K+W
Sbjct: 357 CTGSWDSNLKIW 368
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 53.2 bits (122), Expect = 6e-07
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H+ V+ + S + S S+D V+ Y F+T + + +A + SG
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPS-GEFQTNITRFTLPIRVLAFNGSGSLL 119
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
AA G D I + + G ++ VL GH+ PV+ L F P LAS GTV W+
Sbjct: 120 AAAGDDE-GIKLINTFDGSIVRVLKGHKGPVTGLDFHP--NGELLASIDTTGTVLCWELQ 176
Query: 431 DREVQ------CEPIRLNSDALQV-AFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEG 482
+ V N+ + + + PDG +AV L ++ ++ T E+ ++ G
Sbjct: 177 NGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRG 235
Score = 50.4 bits (115), Expect = 4e-06
Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 10/284 (3%)
Query: 194 HKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLL 253
HK + + S +H+ + + + H+ S++ D A +I +
Sbjct: 27 HKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCV 86
Query: 254 -VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHK 312
++++ S ++ +L + LA++ G + G D +K+ NT +G HK
Sbjct: 87 KLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHK 146
Query: 313 ATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTL--TSPSL-VQFSCVAL---DSS 366
V+G+ N + S GTV C++L TL +P S V +
Sbjct: 147 GPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPD 206
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
G A G + KL + G H + L ++P +A++ D V L
Sbjct: 207 GRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAP--NGKYIATSGLDKQVLL 264
Query: 427 WDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
WD +D++ + + ++++P+G ++V G +E
Sbjct: 265 WD-VDKKQDIDRHKFEERICCMSWKPNGNALSVIDAKGRYGVWE 307
Score = 31.1 bits (67), Expect = 2.8
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 185 KVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLS--ISEHRISSISVSPPG--- 239
K +T + +H +LL + ++G E+ + + TL + ++ V+ P
Sbjct: 146 KGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSP 205
Query: 240 DWIAFACPNI-GQLLVWEWQSEQYVMKQQGHSLDMTC-LAYSPDGLHVVTGGFDGKVKVW 297
D A P + +++++ + + + +G L+ C L ++P+G ++ T G D +V +W
Sbjct: 206 DGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW 265
Query: 298 N 298
+
Sbjct: 266 D 266
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 258 QSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSG 317
Q Q + + +GH + C G +V+TG D VKVW+ +C + H+ ++
Sbjct: 233 QKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITD 292
Query: 318 VTCSANKKFFVSSSLDGTVRCYDL 341
+ S+N F S+S D +R + L
Sbjct: 293 LAVSSNNIFIASASNDCVIRVWRL 316
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTST-RLASAS 419
+A+ S+ F A+ D I VW + G + VL GH V+++AFSP S +L S+S
Sbjct: 293 LAVSSNNIFIASASNDCV-IRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSS 351
Query: 420 WDGTVRLWD 428
DGT R+WD
Sbjct: 352 DDGTCRIWD 360
Score = 41.5 bits (93), Expect = 0.002
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
VW + + +GH D+T LA S + + + + D ++VW +G H
Sbjct: 271 VWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTG 330
Query: 314 TVSGVTCS---ANKKFFVSSSLDGTVRCYD 340
V+ + S + +SSS DGT R +D
Sbjct: 331 AVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 360 CVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS 419
C LD SG + G D + VWS+ L GHE ++ LA S + +ASAS
Sbjct: 250 CAILDRSGRYVITGSDDRL-VKVWSMDTAYCLASCRGHEGDITDLAVSS--NNIFIASAS 306
Query: 420 WDGTVRLW 427
D +R+W
Sbjct: 307 NDCVIRVW 314
Score = 33.9 bits (74), Expect = 0.40
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 348 RTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFS 407
R L +P V +LD+ F A D I VW+ G L+ L GH A +
Sbjct: 539 RILPTPRGVNMIAWSLDN--RFVLAAIMDC-RICVWNASDGSLVHSLTGHTASTYVMDVH 595
Query: 408 PTLTSTRLA-SASWDGTVRLWDCIDR-EVQCEPIRLNSDALQVAFRPDGEEIAVS 460
P + R+A SA +DG +WD + +Q I + + F PDG I +S
Sbjct: 596 P--FNPRIAMSAGYDGKTIVWDIWEGIPIQIYDIS-HYKLVDGKFSPDGTSIILS 647
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 52.4 bits (120), Expect = 1e-06
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWE-WQSE----QYVMKQQGH-SLDMTCLAYSPDGL 283
+ + + + FA + G +LVW+ SE +Y+ +GH S ++TC + L
Sbjct: 266 VGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVL 325
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
+ +G D +KVW+ C +T +H TV+ + C K +SSSLDGT++ +
Sbjct: 326 Y--SGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCW--DKCLISSSLDGTIKLW 377
Score = 38.3 bits (85), Expect = 0.018
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 23/232 (9%)
Query: 210 FLHE---MPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ 266
FLH P + ++ L ++ I I++ P G F+ G LL+W+ S Q V
Sbjct: 167 FLHSWSCFPGLAMVAALEGHKNDIKGIAL-PQGSDKLFSVSGDGTLLIWDCNSGQCV--- 222
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+ +L + +G V G VK +N N V V +T +AN
Sbjct: 223 RSINLQAEAGSLISEGPWVFLG-LPNAVKAFNVQNSKD-VHLEGVVGQVHAMT-AANGML 279
Query: 327 FVSSSLDGTVRCYDLTRYRN--FRTLTSPS---LVQFSCVALDSSGEFCAAGGQDVFEIF 381
F +S G++ + T + F+ LTS + +C + GE +G D I
Sbjct: 280 FAGTS-SGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVV--GGEVLYSGSVDK-TIK 335
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
VW + + L H V+SL L S+S DGT++LW C + E
Sbjct: 336 VWDLNTLQCRMTLKQHIGTVTSLL----CWDKCLISSSLDGTIKLWACSENE 383
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 369 FCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW- 427
F A+G +D ++++W GKL+ L GH V+ +++SPT LASAS DGT+R+W
Sbjct: 503 FIASGSEDS-QVYIWHRSTGKLIVELPGHAGAVNCVSWSPT-NLHMLASASDDGTIRIWG 560
Query: 428 -DCIDREVQCEPIRLNSDALQVAFRPDG 454
D I+++ Q + + S + V R +G
Sbjct: 561 LDRINQQNQKKKLVQGSSSNGVIHRCNG 588
Score = 36.7 bits (81), Expect = 0.056
Identities = 12/48 (25%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV-TGGFDGKVKVW 297
Q+ +W + + +++ GH+ + C+++SP LH++ + DG +++W
Sbjct: 512 QVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 253 LVWEWQSEQYVMKQQ---GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
++WE ++ ++ + GH + + +SPD V+T G + ++ W+ +G C V +
Sbjct: 299 IIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDC-VHMY 357
Query: 310 EHKATVSGVTCS--ANKKFFVSSSLDGTVRCYDL 341
E K +S ++C + + ++ D ++ +DL
Sbjct: 358 E-KGGISPISCGWYPDGQGIIAGMTDRSICMWDL 390
Score = 32.3 bits (70), Expect = 1.2
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 6 HFTGEYR-PFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITM-YS 63
H G+++ P ++ + DEV L +S + LA SKD T I + +I++ ++
Sbjct: 255 HQCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHT 314
Query: 64 LSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 96
L GH +I + + ++T + W+
Sbjct: 315 LVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWD 347
Score = 31.9 bits (69), Expect = 1.6
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Query: 217 VNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYV-MKQQGHSLDMTC 275
++L HTL + H+ + P D C + W+ S V M ++G ++C
Sbjct: 309 ISLKHTL-VGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISC 367
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
Y PDG ++ G D + +W+ + VS + + + K+ VS D
Sbjct: 368 GWY-PDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSV 426
Query: 336 VRCYD 340
+ +D
Sbjct: 427 ISLFD 431
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 52.4 bits (120), Expect = 1e-06
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 308 FHEHKATVSGVTCSANK-KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSS 366
F H A VS + N +SSS DG +R D+ + F + S FS ++ +
Sbjct: 259 FTPHSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVEK-SVFDLVYSTDEAIFS-LSQRPN 316
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
E GQD VW ++ GK + HE ++S+ F+P +A++S DGT L
Sbjct: 317 DEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHV-MATSSTDGTACL 375
Query: 427 WDCIDREVQCEPIRL----NSDALQVA-FRPDGEEIAVSTLDGNITFFEPSTCEQT 477
WD + +P L +S A+ A F P G +A ++LD I + E T
Sbjct: 376 WDLRSMGAK-KPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGANFENT 430
Score = 34.3 bits (75), Expect = 0.30
Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Query: 149 QEQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGL 208
Q+ + S+V S D + + + + D + + D + + Q + + L G G+
Sbjct: 272 QQNSLSRVISSSYDGLIRLMDVEKS-VFDLVYSTDEAI-FSLSQRPNDEQSLYFGQDYGV 329
Query: 209 FFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQS----EQYVM 264
F + ++ + + E RI+SI +P + G +W+ +S + +
Sbjct: 330 FNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTL 389
Query: 265 KQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
HS + +SP GL + T D + V + N
Sbjct: 390 STVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSGAN 426
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 52.0 bits (119), Expect = 1e-06
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANKKFFVSSSLDG 334
+ P +V+GG D +++W+ G E HK ++ + +A+ F++ S D
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDK 242
Query: 335 TVRCYDLTRYRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVWSIKFGK---- 389
T + +D+ +T T ++V + VA+ GGQD + + GK
Sbjct: 243 TAKLWDMRTLTLIKTYT--TVVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAK 300
Query: 390 -----LLEVLG---GHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
L E +G GH P+++LAFSP S +S DG VRL
Sbjct: 301 FYDTILQEEIGGVKGHFGPINALAFSPDGKS--FSSGGEDGYVRL 343
Score = 41.5 bits (93), Expect = 0.002
Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 20/217 (9%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
E ++ + + GD + F+C VW + + + +GHS + C S D ++
Sbjct: 37 ERPLTFLRYNRNGD-LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLI 95
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV--SSSLDGTVRCYDLTRY 344
TG D K+W+ +G TF + A V S V + GT + R
Sbjct: 96 TGSADQTAKLWDVKSGKELFTF-KFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKRI 154
Query: 345 R---------NFRTLTSP-SLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
+ L SP + + + +GG+D I +W + GKLL+
Sbjct: 155 AEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDA-AIRIWDAETGKLLKQS 213
Query: 395 G---GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH+ ++SL + + S D T +LWD
Sbjct: 214 DEEVGHKEAITSLC--KAADDSHFLTGSHDKTAKLWD 248
Score = 32.7 bits (71), Expect = 0.92
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH +T L Y+ +G + + D VW NG T+ H V S +
Sbjct: 34 KGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSR 93
Query: 327 FVSSSLDGTVRCYDL 341
++ S D T + +D+
Sbjct: 94 LITGSADQTAKLWDV 108
Score = 31.5 bits (68), Expect = 2.1
Identities = 54/245 (22%), Positives = 94/245 (38%), Gaps = 12/245 (4%)
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID-REVQCEPIR 440
+W +K GK L AP S+ FS LA + D V I + + +P
Sbjct: 105 LWDVKSGKELFTFK-FGAPARSVDFS---VGDHLAVITTDHFVGTSSAIHVKRIAEDPED 160
Query: 441 LNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQT 500
D++ V PDG++ + G + S E ++ G ++D +
Sbjct: 161 QVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSD----EE 216
Query: 501 LLKTKAFTTICYSADGTCILGGGNSKNVCLYSVKDSVLIKKFVVTENRSLDAVNDFVNRR 560
+ +A T++C +AD + L G + K L+ ++ LIK + + A++ +N
Sbjct: 217 VGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHV 276
Query: 561 NLTEFGNMALLEEREDLEGGNVNIRLPGVKTGDMADRNVKPEV-RVYCVRFSPTGESFAV 619
L G A D G + + VK + + FSP G+SF+
Sbjct: 277 VLGG-GQDASAVTTTDHRAGKFEAKFYDTILQEEIG-GVKGHFGPINALAFSPDGKSFSS 334
Query: 620 AATEG 624
+G
Sbjct: 335 GGEDG 339
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKV 296
+GH + LA+SPDG +GG DG V++
Sbjct: 314 KGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 1e-06
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
SE+ + + +GH ++ L++S G ++++ D V++W C TF +
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVA 369
Query: 319 TCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA--GGQD 376
+ +F+S S+DG VR +D+TR R +V C D+ G + G
Sbjct: 370 FNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCR 429
Query: 377 VFEIFVWSIKFGKLLEVLGGHEAP---VSSLAFSPT-LTSTRLASASWDGTVRLWDCIDR 432
+ IF ++ + + V G + +S L + P+ S ++ S D +R+
Sbjct: 430 FYHIFENQLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI--ICGE 487
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
+V C+ + +F DG+ I ++ D I + S
Sbjct: 488 DVICKLKASSLRTTSASFISDGKHIISTSEDSYINVWSYS 527
Score = 33.9 bits (74), Expect = 0.40
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
H + + +SPDG ++ + G D V+VW+ T T+ E SGV N++ +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY-EVAEVDSGVYFGMNQRSQI 275
Query: 329 SSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG 388
+ + N +T S ++ SS C +F I
Sbjct: 276 -----------EPLKINNEKTEKKSSFLR------KSSDSTCVVLPPTIFSI------SE 312
Query: 389 KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQV 448
K L GH + L++S L S+S D TVRLW + + N+ V
Sbjct: 313 KPLHEFKGHIGEILDLSWS---EKGYLLSSSVDETVRLWR-VGCDECLRTFTHNNFVTCV 368
Query: 449 AFRPDGEEIAVS-TLDGNITFFEPSTC 474
AF P + +S ++DG + ++ + C
Sbjct: 369 AFNPVDDNYFISGSIDGKVRIWDVTRC 395
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 52.0 bits (119), Expect = 1e-06
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
SE+ + + +GH ++ L++S G ++++ D V++W C TF +
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVA 369
Query: 319 TCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA--GGQD 376
+ +F+S S+DG VR +D+TR R +V C D+ G + G
Sbjct: 370 FNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCR 429
Query: 377 VFEIFVWSIKFGKLLEVLGGHEAP---VSSLAFSPT-LTSTRLASASWDGTVRLWDCIDR 432
+ IF ++ + + V G + +S L + P+ S ++ S D +R+
Sbjct: 430 FYHIFENQLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI--ICGE 487
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
+V C+ + +F DG+ I ++ D I + S
Sbjct: 488 DVICKLKASSLRTTSASFISDGKHIISTSEDSYINVWSYS 527
Score = 33.9 bits (74), Expect = 0.40
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
H + + +SPDG ++ + G D V+VW+ T T+ E SGV N++ +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY-EVAEVDSGVYFGMNQRSQI 275
Query: 329 SSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFG 388
+ + N +T S ++ SS C +F I
Sbjct: 276 -----------EPLKINNEKTEKKSSFLR------KSSDSTCVVLPPTIFSI------SE 312
Query: 389 KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQV 448
K L GH + L++S L S+S D TVRLW + + N+ V
Sbjct: 313 KPLHEFKGHIGEILDLSWS---EKGYLLSSSVDETVRLWR-VGCDECLRTFTHNNFVTCV 368
Query: 449 AFRPDGEEIAVS-TLDGNITFFEPSTC 474
AF P + +S ++DG + ++ + C
Sbjct: 369 AFNPVDDNYFISGSIDGKVRIWDVTRC 395
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 51.6 bits (118), Expect = 2e-06
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIK---FGKLLEV-LGGHEAPVSSLAFSPTLTSTRLA 416
VA +S+G A+G D +W+I+ K ++ L GH V L + P S +A
Sbjct: 26 VAWNSNGTKLASGSVDQ-TARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK-HSDLVA 83
Query: 417 SASWDGTVRLWDCIDREVQC-EPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
+AS D +VRLWD R +C + + L+ + + + ++PDG +AV D +T +
Sbjct: 84 TASGDKSVRLWDA--RSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Score = 47.6 bits (108), Expect = 3e-05
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKAT--VSGVTCSANKKFFVSSSLD 333
+ Y PDG HV G D ++ + + F H K V+ + + FF ++
Sbjct: 114 ITYKPDGTHVAVGNRDDELTILDVRK---FKPLHRRKFNYEVNEIAWNMPGDFFFLTTGL 170
Query: 334 GTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEV 393
GTV + TLT+ + + C+A+D G + A G D + +W I L
Sbjct: 171 GTVEVLSYPSLKPLDTLTAHTAGCY-CIAIDPKGRYFAVGSADSL-VSLWDISDMLCLRT 228
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWD 421
E PV +++F+ + +ASAS D
Sbjct: 229 FTKLEWPVRTISFN--YSGEYIASASED 254
Score = 44.0 bits (99), Expect = 4e-04
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
+ ++ I+ + PGD+ F +G + V + S + + H+ C+A P G +
Sbjct: 150 YEVNEIAWNMPGDFF-FLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAV 208
Query: 288 GGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
G D V +W+ ++ C TF + + V ++ + + ++ S+S D
Sbjct: 209 GSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
Score = 35.5 bits (78), Expect = 0.13
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 26 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITM--YSLSGHTDKIIGVFFERKSLDL 83
+V + W+S LA GS D T +I +E + L GHTD + + ++ K DL
Sbjct: 22 KVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDL 81
Query: 84 I-TVSRNGQLCLWEA 97
+ T S + + LW+A
Sbjct: 82 VATASGDKSVRLWDA 96
Score = 31.5 bits (68), Expect = 2.1
Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 11/203 (5%)
Query: 264 MKQQGHSLDMTCLAYSPDGLHVV-TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSA 322
++ +GH+ + L + P +V T D V++W+ +G C ++ +T
Sbjct: 60 LELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKP 118
Query: 323 NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSL-VQFSCVALDSSGE-FCAAGGQDVFEI 380
+ + D + D+ R F+ L + + +A + G+ F G E+
Sbjct: 119 DGTHVAVGNRDDELTILDV---RKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEV 175
Query: 381 FVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIR 440
S K L+ L H A +A P A S D V LWD D +
Sbjct: 176 L--SYPSLKPLDTLTAHTAGCYCIAIDP--KGRYFAVGSADSLVSLWDISDMLCLRTFTK 231
Query: 441 LNSDALQVAFRPDGEEIAVSTLD 463
L ++F GE IA ++ D
Sbjct: 232 LEWPVRTISFNYSGEYIASASED 254
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 258 QSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSG 317
Q Q + K +GH + C + G +V+TG D VK+W+ C + H+ ++
Sbjct: 293 QKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITD 352
Query: 318 VTCSANKKFFVSSSLDGTVRCYDL 341
+ S+N S+S D +R + L
Sbjct: 353 LAVSSNNALVASASNDFVIRVWRL 376
Score = 50.8 bits (116), Expect = 3e-06
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTST-RLASAS 419
+A+ S+ A+ D F I VW + G + VL GH V+++AFSP S +L S+S
Sbjct: 353 LAVSSNNALVASASND-FVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSS 411
Query: 420 WDGTVRLWD 428
DGT R+WD
Sbjct: 412 DDGTCRIWD 420
Score = 47.6 bits (108), Expect = 3e-05
Identities = 57/216 (26%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKA 313
+W ++ + +GH D+T LA S + V + D ++VW +G H
Sbjct: 331 IWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTG 390
Query: 314 TVSGVTCS---ANKKFFVSSSLDGTVRCYDLTRYRNFRT---LTSPSLV----------- 356
V+ + S A+ +SSS DGT R +D RY + + SPS
Sbjct: 391 AVTAIAFSPRQASVYQLLSSSDDGTCRIWD-ARYSQWLPRIYVPSPSDANTGSTSNASQS 449
Query: 357 -QFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL---------LEVLGGHEAPVSSLAF 406
Q C A +++G G D VWS L L+VL GHE V+ + F
Sbjct: 450 HQILCCAYNANGTIFVTGSSD-SNARVWSASKPNLDDAEQPTHELDVLRGHENDVNYVQF 508
Query: 407 S------PTLTSTRLASASWDGTVRLWDCIDREVQC 436
S + T+ L S+ W C D V C
Sbjct: 509 SGCAVAPKSSTADALKEDSYPKFKNSWFCHDNIVTC 544
Score = 43.2 bits (97), Expect = 6e-04
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 19/217 (8%)
Query: 360 CVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS 419
C D SG + G D + +WS++ L GHE ++ LA S + +ASAS
Sbjct: 310 CAIFDRSGRYVITGSDDRL-VKIWSMETALCLASCRGHEGDITDLAVSS--NNALVASAS 366
Query: 420 WDGTVRLWDCIDREVQCEPIRLNSDAL-QVAFRP---DGEEIAVSTLDGNITFFEPSTCE 475
D +R+W D + +R ++ A+ +AF P ++ S+ DG ++ +
Sbjct: 367 NDFVIRVWRLPD-GMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQ 425
Query: 476 QTGS--VEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGGNSKNVCLYSV 533
V SD +G + Q L Y+A+GT + G + N ++S
Sbjct: 426 WLPRIYVPSPSDANTGSTSNASQSHQIL-------CCAYNANGTIFVTGSSDSNARVWSA 478
Query: 534 KDSVLIKKFVVTENRSLDAVNDFVNRRNLTEFGNMAL 570
L T LD + N N +F A+
Sbjct: 479 SKPNLDDAEQPT--HELDVLRGHENDVNYVQFSGCAV 513
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 2e-06
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANKKFFVSSSLDG 334
+ P +V+GG D +++W+ G E HK ++ + +A+ F++ SLD
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 335 TVRCYDLTRYRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVWSIKFGK---- 389
T + +D+ +T T ++V + V+L GGQD + + GK
Sbjct: 216 TAKLWDMRTLTLLKTYT--TVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAK 273
Query: 390 -----LLEVLG---GHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
L E +G GH P+++LAF+P S +S DG VRL
Sbjct: 274 FYDKILQEEIGGVKGHFGPINALAFNPDGKS--FSSGGEDGYVRL 316
Score = 39.5 bits (88), Expect = 0.008
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 20/217 (9%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
E ++ + + GD + F+C +W + + + +GH+ + C S D ++
Sbjct: 10 ERPLTFLRYNREGD-LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLI 68
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS---LDGTVRCYDLTR 343
TG D K+W+ +G TF + A V + + V ++ +D T +
Sbjct: 69 TGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 344 YRNFRTLTSPSLVQFSC---------VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
+ + S++ C + +GG+D I +W + GKLL+
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKV-IRIWDAETGKLLKQS 186
Query: 395 G---GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH+ ++SL + + S D T +LWD
Sbjct: 187 DEEVGHKKDITSLC--KAADDSHFLTGSLDKTAKLWD 221
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH +T L Y+ +G + + D +W NG T+ H V S +
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSR 66
Query: 327 FVSSSLDGTVRCYDL 341
++ S D T + +D+
Sbjct: 67 LITGSADQTAKLWDV 81
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 2e-06
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANKKFFVSSSLDG 334
+ P +V+GG D +++W+ G E HK ++ + +A+ F++ SLD
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 335 TVRCYDLTRYRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVWSIKFGK---- 389
T + +D+ +T T ++V + V+L GGQD + + GK
Sbjct: 216 TAKLWDMRTLTLLKTYT--TVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAK 273
Query: 390 -----LLEVLG---GHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
L E +G GH P+++LAF+P S +S DG VRL
Sbjct: 274 FYDKILQEEIGGVKGHFGPINALAFNPDGKS--FSSGGEDGYVRL 316
Score = 39.5 bits (88), Expect = 0.008
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 20/217 (9%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
E ++ + + GD + F+C +W + + + +GH+ + C S D ++
Sbjct: 10 ERPLTFLRYNREGD-LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLI 68
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS---LDGTVRCYDLTR 343
TG D K+W+ +G TF + A V + + V ++ +D T +
Sbjct: 69 TGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 344 YRNFRTLTSPSLVQFSC---------VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
+ + S++ C + +GG+D I +W + GKLL+
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKV-IRIWDAETGKLLKQS 186
Query: 395 G---GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH+ ++SL + + S D T +LWD
Sbjct: 187 DEEVGHKKDITSLC--KAADDSHFLTGSLDKTAKLWD 221
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH +T L Y+ +G + + D +W NG T+ H V S +
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSR 66
Query: 327 FVSSSLDGTVRCYDL 341
++ S D T + +D+
Sbjct: 67 LITGSADQTAKLWDV 81
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
L++ P ++ G +++W+ G F EH+ V GV ++ FVS D
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYK 74
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
++ ++ +R TL L V + + D I +W+ + + VL
Sbjct: 75 IKVWNYKTHRCLFTLLG-HLDYIRTVQFHHENPWIVSASDDQ-TIRIWNWQSRTCISVLT 132
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH V +F P + SAS D TVR+WD
Sbjct: 133 GHNHYVMCASFHP--KEDLVVSASLDQTVRVWD 163
Score = 49.6 bits (113), Expect = 7e-06
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
++ VW +++ + + GH + + + + +V+ D +++WN + C
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG 133
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V + + VS+SLD TVR +D+ + + L++FS + D
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSD------ 187
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
GG D +K+ VL GH+ V+ +F PTL + S + D V+LW
Sbjct: 188 LFGGVDAI------VKY-----VLEGHDRGVNWASFHPTL--PLIVSGADDRQVKLW 231
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
+R+ +S P WI A + G + +W+++ + + H + + + V+
Sbjct: 10 NRVKGLSFHPKRPWI-LASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 288 GGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
GG D K+KVWN C T H + V + VS+S D T+R ++
Sbjct: 69 GGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 44.0 bits (99), Expect = 4e-04
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 234 SVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGK 293
S SP D + F+ N L +YV+ +GH + ++ P +V+G D +
Sbjct: 171 SASPADDLMRFSQMN-SDLFGGVDAIVKYVL--EGHDRGVNWASFHPTLPLIVSGADDRQ 227
Query: 294 VKVW--NTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
VK+W N T + T H VS V A + VS+S D ++R +D T+ +T
Sbjct: 228 VKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 51.2 bits (117), Expect = 2e-06
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 333 DGTVRCYDLTRYRNFRTLTS--PSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
D RC D+++ F + S S + +C S G+ A+ G D + +W K
Sbjct: 627 DAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAV-LWYTDTMKP 685
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
L H A ++ + FSP+ RLA++S+D TVR+WD
Sbjct: 686 KTTLEEHTAMITDIRFSPS--QLRLATSSFDKTVRVWD 721
Score = 48.0 bits (109), Expect = 2e-05
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 220 IHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYS 279
++++ S +++ S G +A A + + ++W + + + H+ +T + +S
Sbjct: 644 VNSVRASTTKVTCCHFSSDGKMLASAGHD-KKAVLWYTDTMKPKTTLEEHTAMITDIRFS 702
Query: 280 PDGLHVVTGGFDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANKKFFV-SSSLDGTVR 337
P L + T FD V+VW+ N G+ TF H + V+ + K + S D +R
Sbjct: 703 PSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIR 762
Query: 338 CYDLTRYRNFRTLTSPSL-VQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGG 396
+ + R S ++F G++ AA ++ + V ++ + L G
Sbjct: 763 YWSINNGSCTRVYKGGSTQIRFQ----PRVGKYLAASSANL--VNVLDVETQAIRHSLQG 816
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
H P++S+ + P + LAS S D V++W
Sbjct: 817 HANPINSVCWDP--SGDFLASVSED-MVKVW 844
Score = 31.1 bits (67), Expect = 2.8
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 11/176 (6%)
Query: 291 DGKVKVWNTTNGFCFVTFHEHKATVSGVTC---SANKKFFVSSSLDGTVRCYDLTRYRNF 347
D + + + GF F + +A+ + VTC S++ K S+ D + T
Sbjct: 627 DAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLW-YTDTMKP 685
Query: 348 RTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI-KFGKLLEVLGGHEAPVSSLAF 406
+T + + S A D + VW G L GH + V+SL F
Sbjct: 686 KTTLEEHTAMITDIRFSPSQLRLATSSFDK-TVRVWDADNKGYSLRTFMGHSSMVTSLDF 744
Query: 407 SPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPD-GEEIAVST 461
P + + S D +R W C + + Q+ F+P G+ +A S+
Sbjct: 745 HP-IKDDLICSCDNDNEIRYWSI--NNGSCTRV-YKGGSTQIRFQPRVGKYLAASS 796
Score = 29.9 bits (64), Expect = 6.5
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 26 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLIT 85
+VTC +SS ++LA D + + ++ T +L HT I + F L L T
Sbjct: 653 KVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKT--TLEEHTAMITDIRFSPSQLRLAT 710
Query: 86 VSRNGQLCLWEA 97
S + + +W+A
Sbjct: 711 SSFDKTVRVWDA 722
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 51.2 bits (117), Expect = 2e-06
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 270 SLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE-HKATVSGVTCSANKKFFV 328
++ + C S LHV+ G DG + +W+ N +T + H V ++ +++ +
Sbjct: 219 AVQLFCPPESQGFLHVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGI 278
Query: 329 SSSLDGTVRCYDLTRYRNFRTLTSPSLVQ---FSCVALDSSGEFCAAGGQDVFEIFVWSI 385
S D + Y+L T+ ++ S ++ G+ A G D I V++
Sbjct: 279 SGGADDKIVMYNLNHSTGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWD-HRIRVYNY 337
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+ G L +L H A +++++SP +ASAS D TV LW
Sbjct: 338 RKGNALAILKYHRATCNAVSYSP--DCELMASASEDATVALW 377
Score = 38.7 bits (86), Expect = 0.014
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 281 DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
DG T G+D +++V+N G H+AT + V+ S + + S+S D TV +
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
Query: 341 L 341
L
Sbjct: 379 L 379
Score = 35.9 bits (79), Expect = 0.098
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH + +++ P + TG DG++++W+T + H + +GV A +
Sbjct: 14 RGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAH-SRANGVLAVAASPW 72
Query: 327 -----FVSSSLDGTVRCYDL 341
+S DGTV+C+D+
Sbjct: 73 LGEDKIISQGRDGTVKCWDI 92
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 401 VSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPI 439
V ++A SP L ++ S DGTV+ WD D + +P+
Sbjct: 64 VLAVAASPWLGEDKIISQGRDGTVKCWDIEDGGLSRDPL 102
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 393 VLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
VL GH V ++F P+ + L + S DG +R+WD I
Sbjct: 12 VLRGHRHSVMDVSFHPS--KSLLFTGSADGELRIWDTI 47
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 51.2 bits (117), Expect = 2e-06
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 215 PDVNLIHTLSISEHRISSIS-VSPPGDWIAFACPNIGQLLVWEWQSE------QYVMKQQ 267
P+V L HT+ + + + SP G ++A + + G + VW++ S QY +
Sbjct: 201 PNV-LTHTIKFGKKSHAECARFSPDGQFLASSSVD-GFIEVWDYISGKLKKDLQYQADES 258
Query: 268 G--HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKK 325
H + C+ +S D + +G DGK+K+W G C F H V+ ++ S +
Sbjct: 259 FMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGS 318
Query: 326 FFVSSSLDGTVRCYDL 341
+S+S D T R + L
Sbjct: 319 QLLSTSFDQTARIHGL 334
Score = 47.2 bits (107), Expect = 4e-05
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Query: 275 CLAYSPDGLHVVTGGFDGKVKVWNTTNGF--------CFVTFHEHKATVSGVTCSANKKF 326
C +SPDG + + DG ++VW+ +G +F H V + S + +
Sbjct: 218 CARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEM 277
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
S S DG ++ + + R + S S + + I +K
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIH--GLK 335
Query: 387 FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GKLL+ GH + V+ F T +R+ +AS D TV++WD
Sbjct: 336 SGKLLKEFRGHTSYVNHAIF--TSDGSRIITASSDCTVKVWD 375
Score = 42.7 bits (96), Expect = 9e-04
Identities = 20/91 (21%), Positives = 46/91 (50%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G++ +W ++ + + HS +T L++S DG +++ FD ++ +G F
Sbjct: 285 GKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFR 344
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
H + V+ +++ +++S D TV+ +D
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 41.9 bits (94), Expect = 0.001
Identities = 48/247 (19%), Positives = 99/247 (40%), Gaps = 16/247 (6%)
Query: 191 VQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIG 250
+ + +++++L +G G + + I ++S+S S G + +
Sbjct: 269 IDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFD-Q 327
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
+ +S + + + +GH+ + ++ DG ++T D VKVW++ C TF +
Sbjct: 328 TARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTF-K 386
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS----------C 360
+ G S N + + V C + T TL + FS
Sbjct: 387 PPPPLRGTDASVNSIHLFPKNTEHIVVC-NKTSSIYIMTLQGQVVKSFSSGNREGGDFVA 445
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASW 420
+ + G++ G+D +++ ++ + G L + HE V + P LA+ S
Sbjct: 446 ACVSTKGDWIYCIGEDK-KLYCFNYQSGGLEHFMMVHEKDVIGITHHP--HRNLLATYSE 502
Query: 421 DGTVRLW 427
D T++LW
Sbjct: 503 DCTMKLW 509
Score = 33.5 bits (73), Expect = 0.52
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 25 DEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 84
D V C+D+S S +LA GS+D KI + + + H+ + + F R L+
Sbjct: 264 DPVLCIDFSRDSEMLASGSQDGKIKIWRIR--TGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 85 TVS 87
+ S
Sbjct: 322 STS 324
Score = 31.5 bits (68), Expect = 2.1
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
G ++ FSP LAS+S DG + +WD I +++ + ++ +D +F +
Sbjct: 211 GKKSHAECARFSPD--GQFLASSSVDGFIEVWDYISGKLK-KDLQYQADE---SFMMHDD 264
Query: 456 EIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSAD 515
+ I F S +GS +G+ + R T + + ++ T++ +S D
Sbjct: 265 PVLC------IDFSRDSEMLASGSQDGKIKIW--RIRTGVCIRRFDAHSQGVTSLSFSRD 316
Query: 516 GTCILGGGNSKNVCLYSVKDSVLIKKF 542
G+ +L + ++ +K L+K+F
Sbjct: 317 GSQLLSTSFDQTARIHGLKSGKLLKEF 343
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 50.8 bits (116), Expect = 3e-06
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 4/200 (2%)
Query: 273 MTCLAYSPDGLHVVTGGFDGK-VKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS 331
++ +++S G + G G+ VK+W+ C H +T++GV + + S S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVW-SIKFGKL 390
+ G + ++L L P+ + S D + +W +
Sbjct: 155 VGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPK 214
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAF 450
+ L H AP + + FSP+ +AS D + +D R I + +AF
Sbjct: 215 MSWLKQHSAPTAGVCFSPS-NEKIIASVGMDKKLYTYDSGSRR-SSSCIAYEAPFSSLAF 272
Query: 451 RPDGEEIAVSTLDGNITFFE 470
+G + T +G + F++
Sbjct: 273 GDNGYILVAGTSNGRVVFYD 292
Score = 41.1 bits (92), Expect = 0.003
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 226 SEHRISSISVSPPGDWIAFACPN-IGQLL-VWEWQSEQYVMKQQGHSLDMTCLAYSPDGL 283
+E +S+IS S G + C GQ++ +W+ Q + + K +GH+ +T + Y+
Sbjct: 91 AEECLSAISFSKKGS--RYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDE 148
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSSLDGTVRCYDL 341
H+ + G + V N +G + V + +++ V++ DGTV +D
Sbjct: 149 HLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDT 208
Query: 342 T-RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAP 400
T R L S S+ + A+ G D +++ + + + +EAP
Sbjct: 209 TGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDK-KLYTYDSGSRRSSSCI-AYEAP 266
Query: 401 VSSLAF 406
SSLAF
Sbjct: 267 FSSLAF 272
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 50.8 bits (116), Expect = 3e-06
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 267 QGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFVTFHEHKATV-SGVTCSANK 324
Q H+ ++ + Y+P +T +D VK+W TF EH V V +
Sbjct: 103 QEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHG 162
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
F S+S D T+R +D+ + + + SC A D + VW
Sbjct: 163 DVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDK-TVKVWD 221
Query: 385 IKFGKL-LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ ++ L VL GH V + FSP S +AS S+D +V LWD
Sbjct: 222 VRSYRVPLAVLNGHGYAVRKVKFSPHRRSL-IASCSYDMSVCLWD 265
Score = 47.2 bits (107), Expect = 4e-05
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 275 CLAYSPDGLHVVTGGFDGKVKVWNTT---NGFCFVTFHEHKATVSGVTCSANKK-FFVSS 330
C + S D + + G DG VK+++T +F EH V V + ++ F++S
Sbjct: 67 CWSESHDSVLIAAIG-DGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTS 125
Query: 331 SLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
S D TV+ + + R + RT + + V G+ A+ D + +W ++
Sbjct: 126 SWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDC-TLRIWDVREPGS 184
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDAL-QVA 449
++ H+ + S ++ LA++S D TV++WD V + + A+ +V
Sbjct: 185 TMIIPAHDFEILSCDWNK-YDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVK 243
Query: 450 FRPDGEEIAVS 460
F P + S
Sbjct: 244 FSPHRRSLIAS 254
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 50.4 bits (115), Expect = 4e-06
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 213 EMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEW------QSEQYVMKQ 266
++P V+ +L+ +++I SP G+ +A G+L +W+ QS +
Sbjct: 50 KVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADG-GELFIWKLHPSETNQSWKVHKSL 108
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
H D+ L +SPD ++++G D +W+ G H V GV K+
Sbjct: 109 SFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKY 168
Query: 327 FVSSSLDGTVRCY 339
S S D T R Y
Sbjct: 169 VASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 50.4 bits (115), Expect = 4e-06
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 213 EMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEW------QSEQYVMKQ 266
++P V+ +L+ +++I SP G+ +A G+L +W+ QS +
Sbjct: 50 KVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADG-GELFIWKLHPSETNQSWKVHKSL 108
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
H D+ L +SPD ++++G D +W+ G H V GV K+
Sbjct: 109 SFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKY 168
Query: 327 FVSSSLDGTVRCY 339
S S D T R Y
Sbjct: 169 VASLSSDRTCRIY 181
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 50.4 bits (115), Expect = 4e-06
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
L++ P ++ G +++W+ G F EH+ V GV ++ FVS D
Sbjct: 15 LSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYK 74
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
++ ++ +R TL L V + + D I +W+ + + VL
Sbjct: 75 IKVWNYKNHRCLFTLLG-HLDYIRTVQFHHEYPWIVSASDDQ-TIRIWNWQSRTCVSVLT 132
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH V +F P + SAS D TVR+WD
Sbjct: 133 GHNHYVMCASFHP--KEDLVVSASLDQTVRVWD 163
Score = 46.4 bits (105), Expect = 7e-05
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVT 287
+R+ +S P WI A + G + +W+++ + + H + + + V+
Sbjct: 10 NRVKGLSFHPKRPWI-LASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 288 GGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
GG D K+KVWN N C T H + V + VS+S D T+R ++
Sbjct: 69 GGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Score = 46.0 bits (104), Expect = 9e-05
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
++ VW +++ + + GH + + + + +V+ D +++WN + C
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTG 133
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V + + VS+SLD TVR +D+ R + +++ + + D
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSD------ 187
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
GG D +K+ VL GH+ V+ AF PTL + S + D V+LW
Sbjct: 188 LFGGVDAI------VKY-----VLEGHDRGVNWAAFHPTL--PLIVSGADDRQVKLW 231
Score = 44.4 bits (100), Expect = 3e-04
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 261 QYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW--NTTNGFCFVTFHEHKATVSGV 318
+YV+ +GH + A+ P +V+G D +VK+W N T + T H VS V
Sbjct: 197 KYVL--EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Query: 319 TCSANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
A + VS+S D ++R +D T+ +T
Sbjct: 255 MFHAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
Score = 39.9 bits (89), Expect = 0.006
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 191 VQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIG 250
V +H L V+G + + + TL I ++ WI A +
Sbjct: 57 VHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDD-Q 115
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
+ +W WQS V GH+ + C ++ P VV+ D V+VW+
Sbjct: 116 TIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 50.0 bits (114), Expect = 6e-06
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMKQQ----GHSLDMTCLAYSPDGLHVVTGGFDGKV 294
G + FA G +LVW + S GH+L + L + L+ +G D +
Sbjct: 232 GTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLY--SGAMDNSI 289
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN 346
KVW+ N C T EH + V + C +F +S SLD TV+ + T N
Sbjct: 290 KVWSLDNLQCIQTLTEHTSVVMSLICW--DQFLLSCSLDNTVKIWAATEGGN 339
Score = 34.3 bits (75), Expect = 0.30
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 390 LLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC 429
LL L GH+ V+ +A P+ S +L +AS D TVR+WDC
Sbjct: 136 LLTQLDGHQKVVTGIAL-PS-GSDKLYTASKDETVRIWDC 173
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 254 VWEWQSEQYVMKQQGH-SLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHK 312
VW + Q + H S+ M+ + + +++ D VK+W T G + HK
Sbjct: 291 VWSLDNLQCIQTLTEHTSVVMSLICWDQ---FLLSCSLDNTVKIWAATEGGNLEVTYTHK 347
Query: 313 -----ATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
+ GV + K + S D ++ YDL + + + + + + G
Sbjct: 348 EEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQ--EIRSIQIGPGG 405
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLL 391
F G +++ WS + +L
Sbjct: 406 IFFTGDGSGQVKVWKWSTESTPIL 429
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 50.0 bits (114), Expect = 6e-06
Identities = 89/412 (21%), Positives = 167/412 (40%), Gaps = 46/412 (11%)
Query: 126 EEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYI--GDAIRNAD 183
EE + + D + + S+ D+++ N S +S+ + + Y D +
Sbjct: 31 EETYHSDGDHHNQSTFSSNSDSQRPSNASSASSDSSSPIYPLSPWNQTYYPSNDNTTSFS 90
Query: 184 RKVKL----TAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPG 239
+ T YHK + T S + PD LI T+ E + S++ S G
Sbjct: 91 SVTQSPWNQTYSPYHKSPWIYQTRNSD----FEDDPDNGLIGTVVRQEGHVYSLAAS--G 144
Query: 240 DWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
D + F + + VW+ + K S + + + D V TG DGK++VW
Sbjct: 145 D-LLFTGSDSKNIRVWKDLKDFSGFKST--SGFVKAIVVTRDN-RVFTGHQDGKIRVWRG 200
Query: 300 TNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS 359
+ ++ S V K F++ S++ ++ R +N + V S
Sbjct: 201 SK--------KNPEKYSRVGSLPTLKEFLTKSVNPR-NYVEVRRRKNVLKIRHFDAV--S 249
Query: 360 CVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS 419
C++L+ +G D + VW + K LE + H+ V+++ + + S
Sbjct: 250 CLSLNEDLGLLYSGSWDK-TLKVWRLSDSKCLESIEAHDDAVNTVVSG---FDDLVFTGS 305
Query: 420 WDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGS 479
DGT+++W REVQ + ++ +QV + +E AV+ L N+T GS
Sbjct: 306 ADGTLKVWK---REVQGKEMK--HVLVQVLMK---QENAVTALAVNLT----DAVVYCGS 353
Query: 480 VEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGGNSKNVCLY 531
+G + + +T + + +C + G+ +L GG KN+C++
Sbjct: 354 SDGTVNFWERQK---YLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVW 402
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 49.6 bits (113), Expect = 7e-06
Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 10/215 (4%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
SE+ QGH D+ LA+S H+++ D V++WN ++ C F H V+ +
Sbjct: 502 SEKPFCSFQGHVDDVLDLAWSKSQ-HLLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCI 559
Query: 319 TCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA--GGQ 375
+ + ++F+S SLD VR + + + +V +C D G + G
Sbjct: 560 QFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSC 619
Query: 376 DVFEIFVWSIKFGKLLEVLG----GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
++ ++ + + H+ ++ F P +S L ++S D +R+ D D
Sbjct: 620 RMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSS-DSRIRVVDGTD 678
Query: 432 REVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
+ + R S + + DG+ + ++ D ++
Sbjct: 679 LVNKLKGFRNTSSQISASITADGKYVVSASEDSHV 713
Score = 36.3 bits (80), Expect = 0.074
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRL 441
+W++ L+V H V+ + F+P + S S D VR+W DR+V + L
Sbjct: 538 LWNLSSQTCLKVFS-HSDYVTCIQFNP-VDDRYFISGSLDAKVRVWSIPDRQV-VDWYDL 594
Query: 442 NSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
+ + PDG+ + V + G+ + S
Sbjct: 595 HEMVTSACYTPDGQGVLVGSYKGSCRMYSAS 625
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 49.6 bits (113), Expect = 7e-06
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 135 IEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRH----YIGDAIRNADRKVKLTA 190
IE K++ ++ N + N + DK K +H +G + DR LT
Sbjct: 11 IEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFGDDRP--LTG 68
Query: 191 VQYHKENKLLVTGFSSGLFFLHEMPDV-NLIHTLSISEHRISSISVSPPGD-WIAFACPN 248
++ K+LVT SG+ L E+P V N I L + ++ + S D +A A +
Sbjct: 69 CSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTD 128
Query: 249 I--------GQLL--------------VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
G LL VW+ ++ + ++ QGH + + +SP+G H+
Sbjct: 129 RTEKIWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV-SSSLDGTVRCYDLTRYR 345
+GG D + ++W+ H VS V +++F+ ++S D V + +
Sbjct: 189 SGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFS 248
Query: 346 NFRTLTS-PSLVQFSCVALDSSGEFCAA 372
++L S V +A+DSS C A
Sbjct: 249 LVKSLVGHESKVASLDIAVDSSSRKCFA 276
Score = 46.0 bits (104), Expect = 9e-05
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 25/200 (12%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEW-QSEQYVMKQQGHSLDMTCLAYSP-DGLHVVT 287
++ S+S G I C G +WE Q ++ +GH +T + +S D + T
Sbjct: 66 LTGCSLSRDGK-ILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLAT 124
Query: 288 GGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNF 347
D K+W T +G TF KA SS D R +DL RN
Sbjct: 125 ASTDRTEKIWKT-DGTLLQTF---KA---------------SSGFDSLARVWDLRTARNI 165
Query: 348 RTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFS 407
+ + Q V +G A+GG+D + +W ++ KLL ++ H VS + +
Sbjct: 166 -LIFQGHIKQVLSVDFSPNGYHLASGGEDN-QCRIWDLRMRKLLYIIPAHVNLVSQVKYE 223
Query: 408 PTLTSTRLASASWDGTVRLW 427
P LA+AS D V +W
Sbjct: 224 PQ-ERYFLATASHDMNVNIW 242
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 49.2 bits (112), Expect = 1e-05
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLT 342
++ + +DG VK+W+ T G F EH+ V S A S S D +V+ +++
Sbjct: 768 YLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 343 RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK-FGKLLEVLGGHEAPV 401
T+ ++ CV A G F + + ++ +L GH V
Sbjct: 828 ERNCLGTIR--NIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAV 885
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
S F L + L +AS D T++LWD
Sbjct: 886 SYAKF---LDNETLVTASTDNTLKLWD 909
Score = 31.1 bits (67), Expect = 2.8
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRL 441
+W + G+ + HE S+ FS T+LAS S D +V+LW+ +R IR
Sbjct: 780 LWDVTTGQAISHFIEHEKRAWSVDFSEACP-TKLASGSDDCSVKLWNINERNC-LGTIRN 837
Query: 442 NSDALQVAFRPDGEEI 457
++ V F P +
Sbjct: 838 IANVCCVQFSPQSSHL 853
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 49.2 bits (112), Expect = 1e-05
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVW---NTTNGFCFVTFH--------EHKATVS---GVTCS 321
L YSP G +++ D K+W ++ N FC H E++ S +C
Sbjct: 378 LTYSPSGDYILALAEDATHKLWTWSSSQNEFCKPRLHQPQSGKTMENEMATSVQKSTSCF 437
Query: 322 ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIF 381
A K ++ S+ G + +DL + + SP+ + + + G+ A G D IF
Sbjct: 438 AVKGSYLFSTSGGKIAVFDLKNFEKVASFGSPTPMATYFIFIP--GDLLAVGLDDG-SIF 494
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+ + K+ E L GH+ ++ LAFS L S+ DG + LW
Sbjct: 495 IHCLSSRKVKEKLEGHDQKITCLAFSRCFNV--LVSSDSDGKLCLW 538
Score = 36.7 bits (81), Expect = 0.056
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 238 PGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW 297
PGD +A + G + + S + K +GH +TCLA+S +V+ DGK+ +W
Sbjct: 480 PGDLLAVGLDD-GSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW 538
Query: 298 NT 299
+T
Sbjct: 539 ST 540
Score = 34.3 bits (75), Expect = 0.30
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 38 LLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
LLAVG D + IH + + L GH KI + F R L++ +G+LCLW
Sbjct: 483 LLAVGLDDGSIFIHCLSSRK--VKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW 538
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 48.8 bits (111), Expect = 1e-05
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS------CVALDSSG 367
++S ++ S V++S D VRC++++R + +L S S C A G
Sbjct: 27 SISSLSFSPRADILVATSWDNQVRCWEISR--SGASLASAPKASISHDQPVLCSAWKDDG 84
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+GG D + +W + G + HE P++++A+ P + LA+ SWD T++ W
Sbjct: 85 TTVFSGGCDK-QAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNL--LATGSWDKTLKYW 141
Query: 428 D 428
D
Sbjct: 142 D 142
Score = 44.4 bits (100), Expect = 3e-04
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQ-----GHSLDMTCLAYSPDGLH 284
ISS+S SP D I A Q+ WE + H + C A+ DG
Sbjct: 28 ISSLSFSPRAD-ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
V +GG D + K+W +G VT H+ ++ + + S D T++ +D TR
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD-TRQ 145
Query: 345 RN 346
+N
Sbjct: 146 QN 147
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 48.4 bits (110), Expect = 2e-05
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 258 QSEQYVMKQQGHSLDMTCLAYSPDGLHVV-TGGFDGKVKVWNTTNGFCFVTFHEHKATVS 316
Q+++ KQ H+ + LA++ + +++ + D KVKVW+ G C +T H V
Sbjct: 221 QNKEGNYKQGSHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQ 280
Query: 317 GVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGE--FCAA- 372
V + + +S S D TV D R + + +A D E F +
Sbjct: 281 AVAWNHYAPEVLLSGSFDQTVVLKD-GRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSL 339
Query: 373 --GGQDVFEIFVWSIKFGKLLE--VLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
G F++ SI + + GH+ +S++++ + + LA+ S D TV+LWD
Sbjct: 340 EDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNL-LATGSKDRTVKLWD 398
Query: 429 CIDREVQC-EPIRLNSDAL-QVAFRPD 453
+ E C N+ L +AF PD
Sbjct: 399 LSNNEPSCIATHNPNAGGLFFIAFSPD 425
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 48.4 bits (110), Expect = 2e-05
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Query: 265 KQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
+ + HS + LA S DG ++ TGG D V +W+ F H+ TVS +
Sbjct: 217 RNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGT 276
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDS-SGEFCAAGGQDVFEIFVW 383
S S D TV+ +++ + +T Q +A+D+ E G+D ++
Sbjct: 277 SELYSGSFDRTVKVWNV---EDKAFITENHGHQGEILAIDALRKERALTVGRDRTMLYHK 333
Query: 384 SIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
+ +++ + AP SSL ++ S S +GTV LW + ++
Sbjct: 334 VPESTRMI-----YRAPASSLESCCFISDNEYLSGSDNGTVALWGMLKKK 378
Score = 46.0 bits (104), Expect = 9e-05
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 27/243 (11%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEG-NLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNS 158
D DE A D+T+ +KR RL E N E ++ E + + D D D ++ S +
Sbjct: 73 DEDEFA---DETAGEKRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDETIKKSLMQK 129
Query: 159 EEND----KRLMYKKLGRHYIGDAI------RNADRKVKLT-----AVQYHKENKLLVTG 203
++ D +RL+ ++ D R + V L+ K+ ++
Sbjct: 130 QQEDSGRIRRLIASRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
Query: 204 FSSGLFFLHEMPDVNLI--HTLSISE-----HRISSISVSPPGDWIAFACPNIGQLL-VW 255
SSG + P ++ H + + E H S++++ D A + + + +W
Sbjct: 190 VSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIW 249
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATV 315
+ ++ ++V GH ++CL + + +G FD VKVWN + H H+ +
Sbjct: 250 DVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEI 309
Query: 316 SGV 318
+
Sbjct: 310 LAI 312
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 48.0 bits (109), Expect = 2e-05
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV-TCSANKKFFVSSSLDGTVRCYDLTR 343
+ + FDG V++W+ EHK V + SA+ S S DGT
Sbjct: 599 IASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTG-----VS 653
Query: 344 YRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL-LEVLGGHEAPVS 402
+T + VQF SG A G D +++ + ++ K+ L + GH VS
Sbjct: 654 IGTIKTKANVCCVQFP----SDSGRSLAFGSAD-HKVYYYDLRNPKIPLCTMIGHSKTVS 708
Query: 403 SLAFSPTLTSTRLASASWDGTVRLWD 428
+ F + S+ L S+S D T++LWD
Sbjct: 709 YVKF---VDSSTLVSSSTDNTLKLWD 731
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 47.6 bits (108), Expect = 3e-05
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCF---VTFHEHKATVSGVTCSANKKFFVS 329
+T LA +PDG V GG DGK+ ++ + NG H+ +S + S + F S
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLY-SINGDSLTEEAVLERHRGAISVIRYSPDLSMFAS 508
Query: 330 SSLDGTVRCYD-LTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI--K 386
+ L+ +D ++R + + S + +C+A + A G D + V+ +
Sbjct: 509 ADLNREAVVWDRVSREMKLKNMLYHS-ARINCLAWSPNSTMVATGSLDTC-VIVYEVDKP 566
Query: 387 FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+ + G H V L F+ + + S+ D +R+W
Sbjct: 567 ASSRMTIKGAHLGGVYGLGFA---DDSHVVSSGEDACIRVW 604
Score = 42.7 bits (96), Expect = 9e-04
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHR--ISSISVSPPGDWIAFA 245
+TA+ + V G G L+ + +L + HR IS I SP D FA
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSP--DLSMFA 507
Query: 246 CPNIG-QLLVWEWQSEQYVMKQQ-GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN-G 302
++ + +VW+ S + +K HS + CLA+SP+ V TG D V V+
Sbjct: 508 SADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPA 567
Query: 303 FCFVTFH-EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLT 342
+T H V G+ A+ VSS D +R + T
Sbjct: 568 SSRMTIKGAHLGGVYGLG-FADDSHVVSSGEDACIRVWSFT 607
Score = 34.3 bits (75), Expect = 0.30
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 309 HEHKATVSGVTCSANKKFFVSSSLDGTVRCY----DLTRYRNFRTLTSP-SLVQFSC--V 361
H + ATV+ S N ++ S + GTVR + D F+ L +Q+S +
Sbjct: 55 HAYPATVARY--SPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGM 112
Query: 362 ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWD 421
+ +SG+ G+ + F+W G + GH V S A PT R+ + D
Sbjct: 113 RIVASGD---GKGKSLVRAFMWDS--GSNVGEFDGHSRRVLSCAIKPT-RPFRIVTCGED 166
Query: 422 GTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSV 480
V ++ + + ++ V F PDG + + D ++ TCE G +
Sbjct: 167 FLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGEL 225
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 27 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFF 76
+ CL WS S ++A GS DT ++ V+ + M H + G+ F
Sbjct: 537 INCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGF 586
Score = 30.3 bits (65), Expect = 4.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
H+ T YSP+G + +G G V++W N
Sbjct: 55 HAYPATVARYSPNGEWIASGDVSGTVRIWGAYN 87
Score = 29.9 bits (64), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTN 301
GH + +++SPDG V+T D K+W+ ++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 47.2 bits (107), Expect = 4e-05
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 20/217 (9%)
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN-TTNGFCFVTFHEHKAT 314
E + V K GH + L +SPDG ++ TGG DG VK+W T + +F +
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEP 243
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
++ A F + + T ++ T L +A S +A
Sbjct: 244 INQ---QAALVLFPQKAFH-----IEETPFQELYGHTGDVLD----LAWSDSNLLLSASK 291
Query: 375 QDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID-RE 433
+ W + L V H V+ + F+P + AS S DG R+W + R
Sbjct: 292 DKTVRL--WRTGCDQCLHVFH-HNNYVTCVEFNP-VNKNNFASGSIDGKARIWGLSEERV 347
Query: 434 VQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFE 470
V +R + A ++++P+G V + GN F++
Sbjct: 348 VAWTDVRDSISA--ISYQPNGNGFVVGCITGNCRFYQ 382
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GH+ D+ LA+S L +++ D V++W T C FH + NK F
Sbjct: 270 GHTGDVLDLAWSDSNL-LLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNPVNKNNF 328
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF--CAAGGQDVFEIFVWSI 385
S S+DG R + L+ R + + +G C G ++I +
Sbjct: 329 ASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQILDNDV 388
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ + + G + ++++ F P +S ++ +S D VR++D
Sbjct: 389 IMDEQILIRGRNR--ITAVEFCPG-SSEKILVSSEDSKVRIFD 428
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 262 YVMKQQGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTC 320
+V GH ++C+A +P+ L + + DG +++W+ ++ F H+ V G+T
Sbjct: 48 FVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTA 107
Query: 321 SANKKFFVSSSLDGTVRCYDLTR 343
S + VS D TVR +++ R
Sbjct: 108 STDGNVLVSCGTDCTVRLWNVPR 130
Score = 34.7 bits (76), Expect = 0.23
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCE 437
+ GH VS +A +P + SAS DG +RLWD R C+
Sbjct: 52 MDGHRDGVSCMAKNPNYLKG-IFSASMDGDIRLWDISSRRTVCQ 94
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 244 FACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
F+ G + +W+ S + V + GH + L S DG +V+ G D V++WN
Sbjct: 73 FSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWN 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSSLDGTV 336
+SP G VTG +D V+++ G +H + V V S + + +S S D +
Sbjct: 287 FSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNL 346
Query: 337 RCY 339
R +
Sbjct: 347 RLW 349
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.8 bits (106), Expect = 5e-05
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 30/247 (12%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
+ TG DGK++VW + S + K F++ S++ ++ R
Sbjct: 190 IFTGHQDGKIRVWRGSK--------RRTGGYSRIGSLPTLKEFLTKSVNPK-NYVEVRRR 240
Query: 345 RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSL 404
+N + V SC++L+ +G D + VW + K LE + H+ ++++
Sbjct: 241 KNVLKIRHYDAV--SCLSLNEELGLLYSGSWDK-TLKVWRLSDSKCLESIQAHDDAINTV 297
Query: 405 AFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDG 464
A L + S DGT+++W RE+Q + + + V + +E AV+ L
Sbjct: 298 AAG---FDDLLFTGSADGTLKVWK---RELQGKGTK--HFLVNVLMK---QENAVTALAV 346
Query: 465 NITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGGN 524
NIT + GS +G + G+ ++ L+ +C +A G+ +L GG
Sbjct: 347 NIT----AAVVYCGSSDGTVNFWEGQK---YLSHGGTLRGHRLAVLCLAAAGSLVLSGGA 399
Query: 525 SKNVCLY 531
KN+C++
Sbjct: 400 DKNICVW 406
Score = 32.7 bits (71), Expect = 0.92
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSL 332
++CL+ + + + +G +D +KVW ++ C + H ++ V + F S+
Sbjct: 252 VSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTGSA- 310
Query: 333 DGTVRCY 339
DGT++ +
Sbjct: 311 DGTLKVW 317
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 46.0 bits (104), Expect = 9e-05
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 291 DGKVKVWNTTNGFCFVTFHEHKATVSG----VTCSANKKFFVSSSLDGTVRCYDLTR--- 343
DG V+++ +N +T++ VSG VT S + K S S DG +RC+D T
Sbjct: 174 DGCVRLYRISN-LEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHE 232
Query: 344 -YRNFRTLTSPSLVQFSCV-ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
YR L CV +L S G + W + G LLE H+ V
Sbjct: 233 VYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDV 292
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLW 427
++LA +P + R+ SA DG V L+
Sbjct: 293 NTLAAAP--SHNRVFSAGADGQVILY 316
Score = 35.1 bits (77), Expect = 0.17
Identities = 63/241 (26%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNG----FCFVTFH-EHKATVSGVT--CSANKK 325
+ LA S D V DG +++W + G C +T H + + +S + CS +
Sbjct: 16 VVALANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSPSIG 75
Query: 326 F----FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIF 381
SSS+DG++ +DL + L S + + SG F
Sbjct: 76 LPSGRLFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAPISG----------FSSD 125
Query: 382 VWSIKFGKLLEV------LGGHEAPVSSLAF---SPTLTSTRLASASWDGTVRLWDCIDR 432
V IK G L E +G E S F S LA+A DG VRL+ +
Sbjct: 126 VEGIKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISNL 185
Query: 433 E----VQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSV-EGRSDLG 487
E + P R++ AL V + PD + I + DG I ++ ++C + + G LG
Sbjct: 186 EKLTYYRSLP-RVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLG 244
Query: 488 S 488
S
Sbjct: 245 S 245
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
+V+G G V+ W++ +G HK V+ + + + S+ DG V Y L+
Sbjct: 262 LVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLSGS 321
Query: 345 RNFRTLTSPSLVQ 357
N PS Q
Sbjct: 322 TNGSQDLKPSSSQ 334
Score = 29.5 bits (63), Expect = 8.5
Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 13/203 (6%)
Query: 110 DTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKK 169
D K L + N EEE +++D E+ + E ++ + + +
Sbjct: 125 DVEGIKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISN 184
Query: 170 LGR-HYIGDAIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEH 228
L + Y R + R + +T + + K + +G S GL + + ++ ++
Sbjct: 185 LEKLTYYRSLPRVSGRALSVT---WSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLG 241
Query: 229 RISSISVSPPGDWIAFACP------NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDG 282
+ S S ++ C + G + W+ + + H D+ LA +P
Sbjct: 242 GLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSH 301
Query: 283 LHVVTGGFDGKV---KVWNTTNG 302
V + G DG+V K+ +TNG
Sbjct: 302 NRVFSAGADGQVILYKLSGSTNG 324
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 46.0 bits (104), Expect = 9e-05
Identities = 54/181 (29%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 275 CLAYSPDGLHVVTGGFDGKVKVWNTT----NGFCFVTFHE----HKATVSGVTCSANKKF 326
C S DG VVTG DG V VW + G + + H A V + S
Sbjct: 3279 CAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMM 3338
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
SSS D TV +DL+ R L + S+ D +GE A G + VWSI
Sbjct: 3339 IASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAAGS---VLAVWSIN 3395
Query: 387 FGKLLEVLGGHEAP------VSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQC-EPI 439
G L V+ + P V+ FS L +T + G +++W R V C +PI
Sbjct: 3396 -GDCLSVVNTSQLPTDLIVSVAGSTFSDWLETTWYVTGHQSGALKVW----RMVHCTDPI 3450
Query: 440 R 440
+
Sbjct: 3451 K 3451
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMKQQ----GHSLDMTCLAYSPDGLHVVTGGFDGKV 294
G + FA G +L W + + + GH+L + L + L+ +G D +
Sbjct: 239 GTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLY--SGSMDKTI 296
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
KVW+ N C T +H + V + C +F +S SLD TV+ +
Sbjct: 297 KVWSLDNLQCIQTLTDHSSVVMSLICW--DQFLLSCSLDNTVKIW 339
Score = 35.9 bits (79), Expect = 0.098
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 18/197 (9%)
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
G W+ PN+ + E ++Q + G + L D L G DG + W
Sbjct: 202 GPWLLVGMPNLVKAWNIETNADQSLSGPVGQ---VYSLVVGTDLLFA--GTQDGSILAWR 256
Query: 299 TTNGF-CF---VTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
CF + H V + AN+ + S S+D T++ + L + +TLT S
Sbjct: 257 YNAATNCFEPSASLTGHTLAVVTLYVGANRLY--SGSMDKTIKVWSLDNLQCIQTLTDHS 314
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
V S + D C+ + +W+ G LEV H+ LA +
Sbjct: 315 SVVMSLICWDQFLLSCSLDN----TVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEA 370
Query: 415 ---LASASWDGTVRLWD 428
L A D T+RL+D
Sbjct: 371 KPVLLCACNDNTLRLYD 387
Score = 33.1 bits (72), Expect = 0.69
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 390 LLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC 429
LL L GHE VS +A P+ S +L + S D T+R+WDC
Sbjct: 143 LLTQLDGHEKLVSGIAL-PS-GSDKLYTGSKDETLRVWDC 180
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 45.2 bits (102), Expect = 2e-04
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 278 YSP-DGLHVVTGGFDGKVKVWNTTNG--FCFVTFHEHKATVSGVT-CSANKKFFVSSSLD 333
Y P D +V G DG+V V N +G F ++ + ++T+ G+ ++ S +
Sbjct: 450 YHPLDPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSAN 509
Query: 334 GTVRCYDLTRYRNFRTLTSPSLV---------QFSCVALDSSGEFCAAGGQDVFEIFVWS 384
G+++ YD+ + + T +S S Q + V +S+ + A G ++ ++
Sbjct: 510 GSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSK-DVALYD 568
Query: 385 IKFGKLLEVLGG-HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQ-CEPIRLN 442
I G L+V H+ ++ + FS + A++S+D V+LWD + C
Sbjct: 569 IGRGTRLQVFANMHQEHINVVKFS-NHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASST 627
Query: 443 SDALQVAFRPDGEEIAVSTLDGNI 466
+ V F PD + S +D +
Sbjct: 628 KGNVMVCFSPDDRYLLASAVDNEV 651
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 225 ISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLH 284
I + I+SI+ S G ++A + G L ++++ +++ V + + + C A+S DG +
Sbjct: 301 IGQGAINSIAFSNDGAYLATVGRD-GYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKY 359
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
++TGG D V+VW+ + H + VSGV
Sbjct: 360 LLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGV 393
Score = 37.5 bits (83), Expect = 0.032
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
+H + ++ + S + + + DG +R +D + + + S C A G
Sbjct: 299 WHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKS-YYGALLCCAWSMDG 357
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
++ GG+D + VWS++ K++ GH + VS +AF +S + S + + +
Sbjct: 358 KYLLTGGEDDL-VQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPN-SEGSGENVMYRF 415
Query: 428 DCIDREVQCEPIRLNSDALQVAF-RPDGEEIAVST 461
+ ++ Q L D + V RP G ST
Sbjct: 416 GSVGQDTQLLLWDLEMDEIVVPLRRPPGGSPTYST 450
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 44.8 bits (101), Expect = 2e-04
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREV 434
I WS++ G LL + GH++ VS+L + + L S SWDGTVRLW D +
Sbjct: 609 IKAWSLQDGSLLCTMSGHKSVVSTLV----VVNGVLYSGSWDGTVRLWSLSDNSL 659
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
LAYS G HV TG D +K W+ +G T HK+ VS T S S DGT
Sbjct: 592 LAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVS--TLVVVNGVLYSGSWDGT 648
Query: 336 VRCYDLT 342
VR + L+
Sbjct: 649 VRLWSLS 655
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 44.8 bits (101), Expect = 2e-04
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 9/205 (4%)
Query: 268 GHSLDMTCLAYSP---DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANK 324
GHS + +AYSP DG +++ D + N G TF HK V + N
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
S+S D T + ++ + +V+ +C + + G + + IF +
Sbjct: 69 IRAASASADFTAKIWNALTGDELHSFEHKHIVR-ACAFSEDTHRLLTGGMEKILRIFDLN 127
Query: 385 IKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD 444
EV G + ++ + + +T L+S + G +RLWD I + + S
Sbjct: 128 RPDAPPKEV-GNSPGSIRTVEWLHS-DNTILSSCTDTGDIRLWD-IRSDKIVHTLETKSP 184
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFF 469
DG I +T DG+ F
Sbjct: 185 VTSAEVSQDGRYI--TTADGSSVKF 207
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 292 GKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLT 351
G +++W+ + T E K+ V+ S + ++ ++ +V+ +D + ++
Sbjct: 163 GDIRLWDIRSDKIVHTL-ETKSPVTSAEVSQDGRYITTAD-GSSVKFWDAKNFGLLKSYD 220
Query: 352 SPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLT 411
P V+ + + F A GG+D++ + + + G+ + GH PV + ++P
Sbjct: 221 MPCNVESASLEPKHGNTFIA-GGEDMW-VHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGE 278
Query: 412 STRLASASWDGTVRLW 427
S S S DGTVR+W
Sbjct: 279 S--YTSGSEDGTVRIW 292
Score = 33.1 bits (72), Expect = 0.69
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 255 WEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW 297
+++Q+ + + +GH + C+ Y+P G +G DG V++W
Sbjct: 250 FDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 44.4 bits (100), Expect = 3e-04
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 307 TFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSS 366
T + H V V A+ K +S D VR +D+ + + P +A D+
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAA-SKPLGCTIRALAADT- 214
Query: 367 GEFCAAGGQDVFEIFVWSIKFG--KLLEVLG-----------GHEAPVSSLAFSPTLTST 413
+ AGG D F I W G L ++ G GHE P++SLA L T
Sbjct: 215 -KLLVAGGTDGF-IHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA----LDMT 268
Query: 414 RLASASWDGTVRLWD 428
+ S SWD +VR+WD
Sbjct: 269 SIFSGSWDMSVRIWD 283
Score = 32.7 bits (71), Expect = 0.92
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY-DLTR 343
V T G+D V++W+ G T+ + +A+ K V+ DG + C+ L
Sbjct: 177 VFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRAL--AADTKLLVAGGTDGFIHCWKSLDG 234
Query: 344 YRNFRTLT 351
RN LT
Sbjct: 235 LRNLFDLT 242
Score = 31.5 bits (68), Expect = 2.1
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 20/188 (10%)
Query: 253 LVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG----FCFVTF 308
+V W E+ + L T A + D +V GG DG + W + +G F F
Sbjct: 185 IVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGF 244
Query: 309 HEHKATV------SGVTCSA-NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCV 361
+ K +T A + S S D +VR +D + + +TL V +
Sbjct: 245 QKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWV-WGLA 303
Query: 362 ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL-GGHEAPVSSLAFSPTLTSTRLASASW 420
+++ + G DV ++W + L ++ HE SLA S T L +
Sbjct: 304 PHETT--LASTSGSDV---YIWDVSSETPLAIIPDAHEGTTYSLARSH--TGDFLFTGGE 356
Query: 421 DGTVRLWD 428
DG +++++
Sbjct: 357 DGGIKMFE 364
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 44.4 bits (100), Expect = 3e-04
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSL 332
++CLA S D + +G +D KVW ++ C + + H+ V+ V + F S+
Sbjct: 214 ISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVFTGSA- 272
Query: 333 DGTVRCYDL-TRYRNFRTLTSPSLVQFSC----VALDSSGEFCAAGGQDVFEIFVWSIKF 387
DGTV+ + + ++ + S +L++ C +A+D S G D F
Sbjct: 273 DGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENN 332
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
K VL GH+ V L + L + S S D +R+W
Sbjct: 333 MKNGGVLKGHKLAVLCLVAAGNL----MFSGSADLGIRVW 368
Score = 42.3 bits (95), Expect = 0.001
Identities = 50/190 (26%), Positives = 71/190 (37%), Gaps = 20/190 (10%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT------TNGFCFVT 307
VW + V H + + DGL V TG DG VKVW T F T
Sbjct: 237 VWRVSDLRCVESVNAHEDAVNAVVSGFDGL-VFTGSADGTVKVWRREDQAKDTKHFFSET 295
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
+ V+ + + S DGTV ++ R N + + + + L ++G
Sbjct: 296 LLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWE--RENNMKNGGVLKGHKLAVLCLVAAG 353
Query: 368 EFCAAGGQDVFEIFVWSIKFGK----LLEVLGGHEAPVSSLAFSPTLTSTR------LAS 417
+G D+ I VW G L VL GH PV LA S + S
Sbjct: 354 NLMFSGSADL-GIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYS 412
Query: 418 ASWDGTVRLW 427
S D +V++W
Sbjct: 413 GSLDRSVKMW 422
Score = 38.3 bits (85), Expect = 0.018
Identities = 62/268 (23%), Positives = 99/268 (36%), Gaps = 25/268 (9%)
Query: 219 LIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAY 278
L+ +L E I S++ S GD + + + + VW+ E K + LA
Sbjct: 90 LLGSLVREEGHIYSLATS--GD-LLYTGSDSKNIRVWKNHVEFSSFKSNSGLVKAIVLA- 145
Query: 279 SPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRC 338
G + TG DGK++VW + V H T+ + SS + T
Sbjct: 146 ---GDKIFTGHQDGKIRVWKAASKESNV--HRRVGTMPNLLDYIRNSIVPSSYFNFT--- 197
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE 398
R R+ L L SC+AL +G D VW + + +E + HE
Sbjct: 198 ---RRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDK-TFKVWRVSDLRCVESVNAHE 253
Query: 399 APVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCE----PIRLNSDALQVAFRPDG 454
V+++ + + S DGTV++W D+ + L D A D
Sbjct: 254 DAVNAVVSG---FDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQ 310
Query: 455 EEIAV--STLDGNITFFEPSTCEQTGSV 480
V + DG + F+E + G V
Sbjct: 311 SATLVYCGSSDGTVNFWERENNMKNGGV 338
Score = 33.1 bits (72), Expect = 0.69
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 24 LDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDL 83
LD ++CL S RLL GS D T K+ V L + S++ H D + V L +
Sbjct: 211 LDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVE--SVNAHEDAVNAVVSGFDGL-V 267
Query: 84 ITVSRNGQLCLWEASIDADE 103
T S +G + +W A +
Sbjct: 268 FTGSADGTVKVWRREDQAKD 287
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.4 bits (100), Expect = 3e-04
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 271 LDMTCLAYSPDGLHVVTGGFDGKVKVW--NTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
LD+ + S D ++ TG DG +K W + FC TF H V+ A + V
Sbjct: 41 LDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAAL-AGESTLV 99
Query: 329 SSSLDGTVRCYD-LTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
S S D TV+ +D L+ RTL S +C+A+ + A G E+F+W I+
Sbjct: 100 SCSSDTTVKTWDGLSDGVCTRTLRQHS-DYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH + LA + G +V+GG + ++VW+ G + H V + + +F
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 327 FVSSSLDGTVRCYDLTRYRNFRT 349
+S S D +R +DL + R T
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHT 292
Score = 39.5 bits (88), Expect = 0.008
Identities = 23/106 (21%), Positives = 44/106 (41%)
Query: 252 LLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEH 311
L VW+ ++ MK +GH+ ++ L G ++G D +++W+ C T+ H
Sbjct: 237 LRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVH 296
Query: 312 KATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQ 357
+V + C+ + S D + DL + T +Q
Sbjct: 297 TDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQ 342
Score = 36.3 bits (80), Expect = 0.074
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 8/187 (4%)
Query: 250 GQLLVWEWQSE-QYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT-TNGFCFVT 307
G++ +W+ ++ V K + D + + + T G + V ++ ++G+
Sbjct: 149 GEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTI 208
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD-LTRYRNFRTLTSPSLVQFSCVALDSS 366
HK +V + + VS + +R +D T ++ + V+ + LDS+
Sbjct: 209 AKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV--LLLDST 266
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
G FC +G D I +W + + L H V +LA +P+ + + S D + L
Sbjct: 267 GRFCLSGSSDSM-IRLWDLGQQRCLHTYAVHTDSVWALACNPSF--SHVYSGGRDQCLYL 323
Query: 427 WDCIDRE 433
D RE
Sbjct: 324 TDLATRE 330
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.4 bits (100), Expect = 3e-04
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 271 LDMTCLAYSPDGLHVVTGGFDGKVKVW--NTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
LD+ + S D ++ TG DG +K W + FC TF H V+ A + V
Sbjct: 41 LDVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAAL-AGESTLV 99
Query: 329 SSSLDGTVRCYD-LTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
S S D TV+ +D L+ RTL S +C+A+ + A G E+F+W I+
Sbjct: 100 SCSSDTTVKTWDGLSDGVCTRTLRQHS-DYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH + LA + G +V+GG + ++VW+ G + H V + + +F
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 327 FVSSSLDGTVRCYDLTRYRNFRT 349
+S S D +R +DL + R T
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHT 292
Score = 39.5 bits (88), Expect = 0.008
Identities = 23/106 (21%), Positives = 44/106 (41%)
Query: 252 LLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEH 311
L VW+ ++ MK +GH+ ++ L G ++G D +++W+ C T+ H
Sbjct: 237 LRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVH 296
Query: 312 KATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQ 357
+V + C+ + S D + DL + T +Q
Sbjct: 297 TDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQ 342
Score = 36.3 bits (80), Expect = 0.074
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 8/187 (4%)
Query: 250 GQLLVWEWQSE-QYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT-TNGFCFVT 307
G++ +W+ ++ V K + D + + + T G + V ++ ++G+
Sbjct: 149 GEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTI 208
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD-LTRYRNFRTLTSPSLVQFSCVALDSS 366
HK +V + + VS + +R +D T ++ + V+ + LDS+
Sbjct: 209 AKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRV--LLLDST 266
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
G FC +G D I +W + + L H V +LA +P+ + + S D + L
Sbjct: 267 GRFCLSGSSDSM-IRLWDLGQQRCLHTYAVHTDSVWALACNPSF--SHVYSGGRDQCLYL 323
Query: 427 WDCIDRE 433
D RE
Sbjct: 324 TDLATRE 330
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 44.4 bits (100), Expect = 3e-04
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 312 KATVSGVTCSA----NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSL-----VQFSCVA 362
K + G+TC K+ ++SS DG++R +D+ + + + P L V + A
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIK--FGKLLEVLGG--HEAPVSSLAFSPTLTSTRLASA 418
D G+ A G D I +WS+K +G ++ G H ++S+ FS L S
Sbjct: 335 WDRDGKRIAGGVGD-GSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSS--DGRILLSR 391
Query: 419 SWDGTVRLWDCIDREVQC---EPIRLNSDALQVAFRPDGEEIAVST 461
S+DG++++WD + E + VAF PD + I T
Sbjct: 392 SFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
Score = 36.7 bits (81), Expect = 0.056
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDL----TRYRNFRTLT------------SPS 354
H VS + + +S S D TVR YD +R ++FR + SP+
Sbjct: 176 HTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSVSWSPT 235
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
QF CV + + G + E F+ + + L+ GH ++ + P T
Sbjct: 236 SGQFLCVTGSAQAKIFDRDGLTLGE-FMKGDMYIRDLKNTKGHICGLTCGEWHPRTKETV 294
Query: 415 LASASWDGTVRLWDCIDREVQCEPIRL------NSDALQVAFRPDGEEIAVSTLDGNITF 468
L S S DG++R+WD + Q + I+ A+ DG+ IA DG+I
Sbjct: 295 LTS-SEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 469 FEPSTCEQTGSVEGRSDLGSGRAETDLVT 497
+ S GS R D+ G+A TD +T
Sbjct: 354 W--SLKPGWGS---RPDIYVGKAHTDDIT 377
Score = 36.7 bits (81), Expect = 0.056
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 250 GQLLVWE----WQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
G + +W W S + + H+ D+T + +S DG +++ FDG +KVW+
Sbjct: 349 GSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 36.3 bits (80), Expect = 0.074
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 250 GQLLVWE---WQSEQYVMKQQ---GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGF 303
G L +W+ + S+ V+K + + +T A+ DG + G DG +++W+ G+
Sbjct: 301 GSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGW 360
Query: 304 ----CFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYR 345
H ++ V S++ + +S S DG+++ +DL + +
Sbjct: 361 GSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 30.3 bits (65), Expect = 4.9
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 24/237 (10%)
Query: 267 QGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSG----VTCS 321
+GH +TC + P V+T DG +++W+ N + K G TC+
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 322 ANK--KFFVSSSLDGTVRCYDLTRYRNFRT---LTSPSLVQFSCVALDSSGEFCAAGGQD 376
++ K DG+++ + L R + + V S G + D
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFD 394
Query: 377 VFEIFVWSIK-FGKLLEVLGG--HEAPVSSLAFSP----TLTSTRL-ASASWDGTVRLWD 428
+ VW ++ + L+V G + P +++AFSP LT T + ++ G + +D
Sbjct: 395 -GSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGTSVEKDSTTGGLLCFYD 453
Query: 429 CIDRE-VQCEPIRLNSDALQVAFRPDGEEIAVSTLD----GNITFFEPSTCEQTGSV 480
E VQ I S +Q A+ P +I ++ D G ++PS E+ V
Sbjct: 454 RTKLEIVQKVGISPTSSVVQCAWHPRLNQIFATSGDKSQGGTHILYDPSQSERGACV 510
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 44.0 bits (99), Expect = 4e-04
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYV--MKQQGHSLDMTCLAYSPDGLH 284
E + VS + IAF N G +L+ ++++ + +K G + LA+S DG H
Sbjct: 333 EKSLEYFEVSQDSNTIAFV-GNEGYILLVSTKTKELIGTLKMNG---SVRSLAFSEDGKH 388
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSA-NKKFFVSSSLDGTVRCYDLTR 343
+++ G DG+V VW+ C + +T CS+ N F S + G V Y +
Sbjct: 389 LLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGTDRGIVNIYKKSE 448
Query: 344 Y 344
+
Sbjct: 449 F 449
Score = 30.7 bits (66), Expect = 3.7
Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCYDLTRYRN--FRTLTSPSLVQFSCVALDSSGEFCAA 372
++ V N + +++ LD +R + + RN +++ L + + +
Sbjct: 247 INSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVS 306
Query: 373 GGQDVFEIF-VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
G + F F + KF K+ ++G E + F + S +A +G + L
Sbjct: 307 GRRKFFYSFDLEKAKFDKIGPLVGREEKSLEY--FEVSQDSNTIAFVGNEGYILLVSTKT 364
Query: 432 REVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPST--CEQTGSVEG 482
+E+ +++N +AF DG+ + S DG + ++ T C G EG
Sbjct: 365 KEL-IGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEG 416
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 225 ISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLH 284
I + I+SI+ S G +A + G L ++++ +++ V + + + C ++S DG +
Sbjct: 301 ICQGSINSIAFSNDGAHLATVGRD-GYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKY 359
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSAN 323
++TGG D V+VW+ + H + VSGV +N
Sbjct: 360 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSN 398
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 360 CVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS 419
C + G++ GG+D + VWS++ K++ GH + VS +AF +S + S
Sbjct: 350 CCSWSMDGKYILTGGEDDL-VQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPN-SDGS 407
Query: 420 WDGTVRLWDCIDREVQCEPIRLNSDALQVAFR 451
+ + + + ++ Q L D + V R
Sbjct: 408 GEHVMYRFGSVGQDTQLLLWDLEMDEIVVPLR 439
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 43.6 bits (98), Expect = 5e-04
Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 13/266 (4%)
Query: 219 LIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWE-WQSEQYVMKQQGHSLDMTCLA 277
L+HT S +S+I P + + ++ +W+ + S + + GH+ + +
Sbjct: 274 LVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC 333
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKAT-VSGVTCSANKK-FFVSSSLDGT 335
+S DG +T G+D +K W+T G TF K V + +K+ ++ D
Sbjct: 334 FSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 393
Query: 336 VRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG 395
+ +D+ + + +D++ F + D + VW +++ +
Sbjct: 394 IVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTS--SDDKSLRVWEFGIPVVIKYIS 451
Query: 396 -GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD-----ALQVA 449
H + S++ P LA+ S D + ++ +R + R A QV
Sbjct: 452 EPHMHSMPSISVHP--NGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 509
Query: 450 FRPDGEEIAVSTLDGNITFFEPSTCE 475
F PDG + +G F++ +C+
Sbjct: 510 FSPDGRFVMSGDGEGKCWFWDWKSCK 535
Score = 43.6 bits (98), Expect = 5e-04
Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 9/184 (4%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
+++ W+ + + + H + + + + VT D ++VW E
Sbjct: 393 KIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 452
Query: 311 -HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYR---NFRTLTSPSLVQ-FSC-VALD 364
H ++ ++ N + + SLD + Y TR R N + + +V ++C V
Sbjct: 453 PHMHSMPSISVHPNGNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFS 511
Query: 365 SSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTV 424
G F +G + + + W K K+ L H + P L +++A+ WDG +
Sbjct: 512 PDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHNGVCIGAEWHP-LEQSKVATCGWDGLI 569
Query: 425 RLWD 428
+ WD
Sbjct: 570 KYWD 573
Score = 41.5 bits (93), Expect = 0.002
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 228 HRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQ---GHSL-DMTC-LAYSPDG 282
H + SISV P G+W+A + Q+L++ + + K++ GH + C + +SPDG
Sbjct: 456 HSMPSISVHPNGNWLAAQSLD-NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 514
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSS-SLDGTVRCYD 340
V++G +GK W+ + F T H G ++ V++ DG ++ +D
Sbjct: 515 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 43.2 bits (97), Expect = 6e-04
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-ANKK 325
+GH+ ++ L++S G +++ D V++W + + HK+ V+ V + +
Sbjct: 360 RGHTGEILDLSWSEKGF-LLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDN 418
Query: 326 FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
+F+S S+DG VR +D++++R +V C D G
Sbjct: 419 YFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKG 460
Score = 39.5 bits (88), Expect = 0.008
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID-REVQCEPIRLNSDALQVAFRPDGE 455
H++ V+ +AF+P + S S DG VR+WD R V IR AL +RPDG+
Sbjct: 403 HKSFVTCVAFNP-VDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTAL--CYRPDGK 459
Query: 456 EIAVSTLDGNITFF 469
V ++ G F+
Sbjct: 460 GAVVGSMTGECRFY 473
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
++ ++ +P D + G++ +W+ S+ V+ +T L Y PDG V G
Sbjct: 407 VTCVAFNPVDDNYFISGSIDGKVRIWD-VSQFRVVDYTDIRQIVTALCYRPDGKGAVVGS 465
Query: 290 FDGKVKVWNTTN 301
G+ + ++TT+
Sbjct: 466 MTGECRFYHTTD 477
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 43.2 bits (97), Expect = 6e-04
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG 367
FH KAT + T + + F + GT ++ + S + S +A+ S G
Sbjct: 2584 FHHGKATTTS-TSGSLMRMFKGPASSGTGDW----QFPQAQAFASSGIRSSSVIAITSDG 2638
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
E G D I + S K LE GH APV+ LA SP + L + S D TV LW
Sbjct: 2639 EIITGGHADN-SIKLVSSDGAKTLETAFGHCAPVTCLALSP--DNNFLVTGSRDSTVLLW 2695
Score = 41.5 bits (93), Expect = 0.002
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GH +TCLA SPD +VTG D V +W F T +T SG S +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPSSTSNTNL 2725
Query: 328 VSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKF 387
++ + +C R + + C + SS + + ++ + SI+
Sbjct: 2726 ANTLANKGKKC----RLEGPIQVLRGHRRELVCCCV-SSDQGVVVSSSESSDVLLHSIRK 2780
Query: 388 GKLLEVLGGHEA 399
G+L+ L G +A
Sbjct: 2781 GRLIRRLVGVKA 2792
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 43.2 bits (97), Expect = 6e-04
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 16/168 (9%)
Query: 276 LAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
+ YS G V+ G D VK+W+ + C T K VS V S++ + G
Sbjct: 69 IRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEK-RVSAVAISSDDSHVCYADKFGV 127
Query: 336 VRCYDLTRYRNFRTLTSPS---LVQFSCVALDS-----SGEFCAAGGQDV-FEIFVWSIK 386
V +L + +TL S L+ C + S G + + +D + V+ K
Sbjct: 128 VWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKK 187
Query: 387 ----FGKLLEVLGGHEAPVSSLAF--SPTLTSTRLASASWDGTVRLWD 428
++ GH ++ AF +P LT L S S D TVRLWD
Sbjct: 188 PLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235
Score = 37.5 bits (83), Expect = 0.032
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 184 RKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIA 243
RK + A++Y KL V+ L + ++T+ SE R+S++++S +
Sbjct: 62 RKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVC-SEKRVSAVAISSDDSHVC 120
Query: 244 FACPNIGQLLVWEWQ---------SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKV 294
+A G + V E S++ + + +T L +SPDG ++++ D K+
Sbjct: 121 YA-DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKI 179
Query: 295 KVW----------NTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLT 342
+V + FC T T + + +S S D TVR +D+T
Sbjct: 180 RVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDIT 237
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 42.3 bits (95), Expect = 0.001
Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 35/272 (12%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
Q H + + +SPDG ++ + G DG ++VW+ EH +C +
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVED---ERCEEHDVPKIDPSCI----Y 300
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSP-SLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
F S L +R + + +L SP + +CV + +F +
Sbjct: 301 FEVSKLS-ELRPVAVEKDGITGSLMSPRKTTESACVIIPPK----------IFRVL---- 345
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
K L GH + +++S + RL SAS D +VRLW I E N+
Sbjct: 346 --DKPLHEFLGHSGDILDISWSK---NNRLLSASVDNSVRLWQ-IGCEDCLGIFSHNNYV 399
Query: 446 LQVAFRP-DGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKT 504
V F P D + ++DG + + S C+ + R + + + D ++ T
Sbjct: 400 TSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPD--GQAVIIGT 457
Query: 505 KAFTTICYSADGTCILGGGNSKNVCLYSVKDS 536
Y+ G C+ G ++CL++ K S
Sbjct: 458 LTSDCRFYNVSGHCLQLDG---HICLHNKKKS 486
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 42.3 bits (95), Expect = 0.001
Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 35/272 (12%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
Q H + + +SPDG ++ + G DG ++VW+ EH +C +
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVED---ERCEEHDVPKIDPSCI----Y 300
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSP-SLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
F S L +R + + +L SP + +CV + +F +
Sbjct: 301 FEVSKLS-ELRPVAVEKDGITGSLMSPRKTTESACVIIPPK----------IFRVL---- 345
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
K L GH + +++S + RL SAS D +VRLW I E N+
Sbjct: 346 --DKPLHEFLGHSGDILDISWSK---NNRLLSASVDNSVRLWQ-IGCEDCLGIFSHNNYV 399
Query: 446 LQVAFRP-DGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKT 504
V F P D + ++DG + + S C+ + R + + + D ++ T
Sbjct: 400 TSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPD--GQAVIIGT 457
Query: 505 KAFTTICYSADGTCILGGGNSKNVCLYSVKDS 536
Y+ G C+ G ++CL++ K S
Sbjct: 458 LTSDCRFYNVSGHCLQLDG---HICLHNKKKS 486
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 41.9 bits (94), Expect = 0.001
Identities = 63/266 (23%), Positives = 91/266 (34%), Gaps = 21/266 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
QGH+ + L ++P+ +V+ DG++ VWN A V S N +
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQS 121
Query: 327 FVSSSLDGTVRCYDLTRYRN-------FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFE 379
LD + L+ + R LT C + + D
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 380 IFVWSIKFGKLLEVLGG-----HEAPVSSLAFSPTLTSTRLASASWDGTVRLWD--CIDR 432
I +W + G V GG H A V S++ S + S S D T RLWD R
Sbjct: 182 I-LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGS-NPNWFISGSCDSTARLWDTRAASR 239
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAE 492
V+ D V F PDG + DG ++ T Q + D G
Sbjct: 240 AVRTFHGH-EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD-GENGPV 297
Query: 493 TDL---VTPQTLLKTKAFTTICYSAD 515
T + V+ + L A CY D
Sbjct: 298 TSIAFSVSGRLLFAGYASNNTCYVWD 323
Score = 41.5 bits (93), Expect = 0.002
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 394 LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLN-SDALQVAFRP 452
L GH V SL ++P R+ SAS DG + +W+ + + + I+L + + AF P
Sbjct: 61 LQGHTGKVYSLDWTPE--RNRIVSASQDGRLIVWNALTSQ-KTHAIKLPCAWVMTCAFSP 117
Query: 453 DGEEIAVSTLDGNITFFE-PSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTIC 511
+G+ +A LD + F ST ++ G+V L R V+ + + I
Sbjct: 118 NGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRG---YVSCCQYVPNEDAHLIT 174
Query: 512 YSADGTCIL 520
S D TCIL
Sbjct: 175 SSGDQTCIL 183
Score = 40.3 bits (90), Expect = 0.005
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 266 QQGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFV-TFHEHKATVSGVTCSAN 323
Q GH+ D+ ++ S + ++G D ++W+T V TFH H+ V+ V +
Sbjct: 200 QSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Query: 324 KKFFVSSSLDGTVRCYDLT---RYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEI 380
F + S DGT R YD+ + + ++ + +A SG AG
Sbjct: 260 GYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTC 319
Query: 381 FVWSIKFGK 389
+VW G+
Sbjct: 320 YVWDTLLGE 328
Score = 37.1 bits (82), Expect = 0.043
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 232 SISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVVTGGF 290
SIS S P +I+ +C + +L W+ ++ ++ GH D+ + + PDG TG
Sbjct: 211 SISGSNPNWFISGSCDSTARL--WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSD 268
Query: 291 DGKVKVWNTTNGFCFVTFHEH 311
DG ++++ G + H
Sbjct: 269 DGTCRLYDIRTGHQLQVYQPH 289
Score = 35.9 bits (79), Expect = 0.098
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 18/227 (7%)
Query: 216 DVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMK-QQGHSLDMT 274
D+ TL ++ S+ +P + I A + G+L+VW + Q + + MT
Sbjct: 54 DLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD-GRLIVWNALTSQKTHAIKLPCAWVMT 112
Query: 275 CLAYSPDGLHVVTGGFDGKVKVWNTT-----NGFCFVT--FHEHKATVSGVTCSANK-KF 326
C A+SP+G V GG D +++ + +G V+ H+ VS N+
Sbjct: 113 C-AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAH 171
Query: 327 FVSSSLDGTVRCYDLTRYRNFRT----LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFV 382
++SS D T +D+T S V++ S G +
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARL 231
Query: 383 WSIK-FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
W + + + GHE V+++ F P R + S DGT RL+D
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFP--DGYRFGTGSDDGTCRLYD 276
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 41.9 bits (94), Expect = 0.001
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 4/154 (2%)
Query: 191 VQYHKENKLLVTGFSSGLFFLHEMP-DVNLIHTLSISEHRISSISVS--PPGDWIAFACP 247
+ +H L+ G G L+ D +L+ + H+ S +V G I A
Sbjct: 12 IDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASA 71
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT 307
+ L Q + H D + + +G G VK+W+T C
Sbjct: 72 DCSILATDVETGAQVAHLENAHE-DAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHE 130
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
F+ H+ +SG+T +++ V +S DGT+ +L
Sbjct: 131 FNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNL 164
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 41.9 bits (94), Expect = 0.001
Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLT 342
+++ T D +++W G C+ +F V+ + + K V ++ + +R +DL
Sbjct: 11 VYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLV-AACNPHIRLFDLR 69
Query: 343 RY------RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGG 396
Y RNF + T V +G +G +D + +W ++ +
Sbjct: 70 SYNPHIPVRNFVSHTK----NVMAVGFQYTGHMMYSGSED-GSVKIWDLRVRECQREFRS 124
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPI-RLNSDALQVAFRPDGE 455
+PV+++ P T L S +G +R+WD CE + + + + DG
Sbjct: 125 -VSPVNTVVLHP--NQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDG- 180
Query: 456 EIAVSTLDGNITFFEPSTCEQTGSVE 481
+ V+ D + S CE+ E
Sbjct: 181 TMVVAANDRGTCYVWRSLCERQTMTE 206
Score = 39.9 bits (89), Expect = 0.006
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G + +W+ + + + + S T + + P+ +++G +G ++VW+ C
Sbjct: 106 GSVKIWDLRVRECQREFRSVSPVNTVVLH-PNQTELISGDQNGNIRVWDLRADLCSCELV 164
Query: 310 EHKAT-VSGVTCSANKKFFVSSSLDGTVRCY---------DLTRYRNFRTLTSPSLVQFS 359
T + +T + V+++ GT CY +T + L + +
Sbjct: 165 PEVGTPIRSLTVMWDGTMVVAANDRGT--CYVWRSLCERQTMTEFEPLHKLQAHNSHILK 222
Query: 360 CVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS 419
C+ L ++ A D + +W++ KL +VL GHE V FS + L +AS
Sbjct: 223 CL-LSPGNKYLATASSDK-TVKIWNLDGFKLEKVLTGHERWVWDCDFS--MDGEYLVTAS 278
Query: 420 WDGTVRLW 427
D T RLW
Sbjct: 279 SDTTARLW 286
Score = 35.9 bits (79), Expect = 0.098
Identities = 43/207 (20%), Positives = 81/207 (39%), Gaps = 12/207 (5%)
Query: 230 ISSISVSPPGDWIAFAC-PNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTG 288
++ + ++P + AC P+I + + V H+ ++ + + G + +G
Sbjct: 43 VNRLELTPEKGKLVAACNPHIRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSG 102
Query: 289 GFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFR 348
DG VK+W+ C F + V+ V N+ +S +G +R +DL
Sbjct: 103 SEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSC 161
Query: 349 TLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVW-------SIKFGKLLEVLGGHEAPV 401
L + + G A D +VW ++ + L L H + +
Sbjct: 162 ELVPEVGTPIRSLTVMWDGTMVVA-ANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHI 220
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
SP + LA+AS D TV++W+
Sbjct: 221 LKCLLSP--GNKYLATASSDKTVKIWN 245
Score = 33.1 bits (72), Expect = 0.69
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVM-------KQQGHSLDMTCLAYSPDG 282
I S++V G + A + G VW E+ M K Q H+ + SP
Sbjct: 171 IRSLTVMWDGTMVV-AANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGN 229
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
++ T D VK+WN H+ V S + ++ V++S D T R + +
Sbjct: 230 KYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSM 288
Score = 31.5 bits (68), Expect = 2.1
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 214 MPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDM 273
M + +H L I +SP ++A A + + +W + GH +
Sbjct: 204 MTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD-KTVKIWNLDGFKLEKVLTGHERWV 262
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEH-KATV 315
+S DG ++VT D ++W+ G + + H KATV
Sbjct: 263 WDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATV 305
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 41.9 bits (94), Expect = 0.001
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 11/164 (6%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
HS ++CL+ + D + + +D VKVW + C + H V+ VT + + F
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVF-- 191
Query: 329 SSSLDGTVRCY--DLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
+ S DGTV+ + ++ R +L L Q S V + G + W +
Sbjct: 192 TGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFWEMG 251
Query: 387 FGKLL---EVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
KLL EV H V +A + L L S + D + +W
Sbjct: 252 DKKLLKHCEVFKKHRLAVLCIAAAGKL----LFSGAADKKICVW 291
Score = 35.1 bits (77), Expect = 0.17
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 33/248 (13%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
V TG DGK++VW T++ + T +G + A K SS V+ +
Sbjct: 76 VFTGHQDGKIRVWKTSSK------NPRVYTRAG-SLPALKDVLKSS-----VKPSNYVEV 123
Query: 345 RNFRT-LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSS 403
R RT L SC++L + D + VW I K +E + H+ V+S
Sbjct: 124 RRCRTALWIKHSDAVSCLSLAEDQGLLYSASWDR-TVKVWRIHDLKCIESIKAHDDAVNS 182
Query: 404 LAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLD 463
+ + +L T S DGTV++W RE++ + R Q + +E AV+ L
Sbjct: 183 VTTAESLVFT----GSADGTVKVWK---REIRGK--RTAHSLFQTLLK---QESAVTAL- 229
Query: 464 GNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGG 523
+T +GS +G + + L+ + K +C +A G + G
Sbjct: 230 --VT---SHMAVYSGSSDGAVNFWE-MGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGA 283
Query: 524 NSKNVCLY 531
K +C++
Sbjct: 284 ADKKICVW 291
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 41.9 bits (94), Expect = 0.001
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWE-WQSEQYVMKQ----QGHSLDMTCLAYSPDGLH 284
ISS+S SP D I A Q+ WE +S+ + + H + C A+ DG
Sbjct: 29 ISSLSFSPKAD-ILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVR 337
V TGG D + K+W +G T H A + + V+ S D T++
Sbjct: 88 VFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
Score = 40.7 bits (91), Expect = 0.003
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 314 TVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFS------CVALDSSG 367
++S ++ S V++S D VRC+++T R+ ++ S V S C A G
Sbjct: 28 SISSLSFSPKADILVATSWDCQVRCWEIT--RSDGSIASEPKVSMSHDQPVLCSAWKDDG 85
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
GG D + +W + G + H+AP + +A+ P + L + SWD T++
Sbjct: 86 TTVFTGGCDK-QAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGM--NLLVTGSWDKTLK 140
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 401 VSSLAFSPTLTSTRLASASWDGTVRLWDCI--DREVQCEP-IRLNSD--ALQVAFRPDGE 455
+SSL+FSP + L + SWD VR W+ D + EP + ++ D L A++ DG
Sbjct: 29 ISSLSFSPK--ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGT 86
Query: 456 EIAVSTLD 463
+ D
Sbjct: 87 TVFTGGCD 94
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 41.9 bits (94), Expect = 0.001
Identities = 50/175 (28%), Positives = 67/175 (38%), Gaps = 18/175 (10%)
Query: 270 SLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT----NGFCFVTFHE----HKATVSGVTCS 321
S + C S DG VVTG DG V VW + G + + H A V+ + S
Sbjct: 3330 SNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVS 3389
Query: 322 ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIF 381
S S D TV +DL+ R L + + D +GE A G +
Sbjct: 3390 QPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGT---VLA 3446
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASW------DGTVRLWDCI 430
VWSI G L V + P S+ TS+ SW G V++W I
Sbjct: 3447 VWSIN-GDCLAVANTSQLPSDSVLSVTGSTSSDWLETSWYVTGHQSGAVKVWRMI 3500
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 41.5 bits (93), Expect = 0.002
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 250 GQLLVWEW------QSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGF 303
G+L +W+ QS + H D+ L +SPD ++++G D +W+ G
Sbjct: 27 GELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGS 86
Query: 304 CFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY 339
H V GV K+ S S D T R Y
Sbjct: 87 VHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 41.5 bits (93), Expect = 0.002
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 285 VVTGGFDGKVKVWNTTN---GFCFVTFHEHKATVSGVTCSANKK---FFVSSSLDGTVRC 338
+V GGF G++ + FC T + A + V N F++S+ D VR
Sbjct: 203 LVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFMASNNDCGVRD 262
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE 398
+D+ RY+ + V S +L G+ A G D + V G+ + L GH
Sbjct: 263 FDMERYKLVQLFRYLWPVNHS--SLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHL 319
Query: 399 APVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ-VAFRPDGEEI 457
+ A+ P A+ + D T R+WD ++ N A++ + F DG +
Sbjct: 320 DYSFASAWHP--NGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYV 377
Query: 458 AVS 460
A++
Sbjct: 378 AMA 380
Score = 30.7 bits (66), Expect = 3.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
++ S+SP G +A + LLV + + Q + +GH A+ P+G+ TG
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 338
Query: 290 FDGKVKVWNT 299
D ++W+T
Sbjct: 339 QDKTCRIWDT 348
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 41.5 bits (93), Expect = 0.002
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 285 VVTGGFDGKVKVWNTTN---GFCFVTFHEHKATVSGVTCSANKK---FFVSSSLDGTVRC 338
+V GGF G++ + FC T + A + V N F++S+ D VR
Sbjct: 197 LVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFMASNNDCGVRD 256
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE 398
+D+ RY+ + V S +L G+ A G D + V G+ + L GH
Sbjct: 257 FDMERYKLVQLFRYLWPVNHS--SLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHL 313
Query: 399 APVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ-VAFRPDGEEI 457
+ A+ P A+ + D T R+WD ++ N A++ + F DG +
Sbjct: 314 DYSFASAWHP--NGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYV 371
Query: 458 AVS 460
A++
Sbjct: 372 AMA 374
Score = 30.7 bits (66), Expect = 3.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
++ S+SP G +A + LLV + + Q + +GH A+ P+G+ TG
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLV-DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGN 332
Query: 290 FDGKVKVWNT 299
D ++W+T
Sbjct: 333 QDKTCRIWDT 342
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 41.5 bits (93), Expect = 0.002
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 268 GHSLDMTCLAYSPDGLHVV-TGGFDGKVKVWNT-TNGFCFV-TFHEHKATVSGVTCSANK 324
GH+ +T + +S +H++ + G DG V VWN +N V F H A V V S
Sbjct: 158 GHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQG 217
Query: 325 KFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWS 384
+S D T R +D+ R ++ +V D+ F + G + + +W
Sbjct: 218 LSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKG--SLRLWD 275
Query: 385 IKFGKLLEVLGGHEAPVSSLAF----SPTLTSTRLASAS-WDGTVRLWDCIDREV 434
I+ K + P+ + F ++S+ ++ + + V +WD I REV
Sbjct: 276 IRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWD-ISREV 329
Score = 34.3 bits (75), Expect = 0.30
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
GE A+G D ++++ K L++ L +E P ++++ P L + +A+ SW+G V +
Sbjct: 398 GETLASGSSDG-SVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNV-VAACSWNGQVSV 455
Query: 427 WD 428
++
Sbjct: 456 FE 457
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.5 bits (93), Expect = 0.002
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 220 IHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWE-WQSEQY--VMKQQGHSLDMTCL 276
I TL E+ + S+S + G +A C + +WE + +Y GH+ D+ +
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLA-TCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV 169
Query: 277 AYSPDGLHVVTGGFDGKVKVWNTTNGF----CFVTFHE----HKATVSGVTCSANKKFFV 328
+ P + + +D +KVW + + C T E H +TV ++ +A V
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV 229
Query: 329 SSSLDGTVRCY--DLTR------YRNFRTLTSPSLVQFSCV--ALDSSGEFCAAG-GQDV 377
+ S D T++ + D+ + Y + L + S + A S + A+G G +
Sbjct: 230 TCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNA 289
Query: 378 FEIFVWSI-------KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+FV S + LL+ HE V+S+ +SP + LASAS DG V++W
Sbjct: 290 IRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 38.3 bits (85), Expect = 0.018
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 242 IAFACPNIGQLLVWEWQS--EQYVMK---QQGHSLDMTCLAYSPDGLHVVTGGFDGKVKV 296
I +C + +WE S + K ++ H+ + A+SP G + T FDG +
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGI 100
Query: 297 W-NTTNGF-CFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
W N + F C T H+ V V+ +A+ + S D +V +++
Sbjct: 101 WKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Score = 35.9 bits (79), Expect = 0.098
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 391 LEVLGGHEAPVSSLAFSPTLT-----STRLASASWDGTVRLWD--CIDREVQCEPIRLNS 443
++ L GH V S+A++P + S LAS S D TVR+W+ + R C+ + +
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 444 DALQV---AFRPDGEEIAVSTLDG 464
V A+ P G+ +A ++ DG
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDG 96
Score = 34.7 bits (76), Expect = 0.23
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 32 WSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQ 91
WS +LLA S D TT I E + +L GH +++ V + L T SR+
Sbjct: 82 WSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKS 141
Query: 92 LCLWE 96
+ +WE
Sbjct: 142 VWIWE 146
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPI--RLNSDALQVAFRPDG 454
H V S A+SP+ LA+AS+DGT +W E +C ++ V++ G
Sbjct: 73 HTRTVRSCAWSPS--GQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASG 130
Query: 455 EEIAVSTLDGNITFFE 470
+A + D ++ +E
Sbjct: 131 SCLATCSRDKSVWIWE 146
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 15/184 (8%)
Query: 257 WQSEQYVMKQ--QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG----FCFVTFHE 310
W++ K+ + H + +A S +G V TG D +++VW G T +
Sbjct: 220 WRASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEK 278
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCV-ALDSSGEF 369
HK+ V+ + + + S S D ++ ++ N+ + + +L + +
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDL 338
Query: 370 CAAGGQDVFEIFVWSI---KFGKLLEVLGGHEAPVSSLAF--SPTLTS-TRLASASWDGT 423
+G D + +W LEVL GH PV SLA L + S S DG
Sbjct: 339 LLSGSADR-TVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGE 397
Query: 424 VRLW 427
V+ W
Sbjct: 398 VKCW 401
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
Query: 219 LIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQG--HSLDMTCL 276
L+ TL + +++++++ G + F+ +LVWE + M +G D L
Sbjct: 272 LVATLEKHKSAVNALALNDDGS-VLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAIL 330
Query: 277 AYSPDGLHVVTGGFDGKVKVWNT---TNGFCFVTFHEHKATVSGVTCSANKKF-----FV 328
+ +++G D V++W ++ C H V + K+ +
Sbjct: 331 SLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSII 390
Query: 329 SSSLDGTVRCYDLT 342
S SLDG V+C+ ++
Sbjct: 391 SGSLDGEVKCWKVS 404
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/84 (25%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 260 EQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT 319
E+ + + +GH+ ++ +++S D ++++ D V++W + C F H + V+ V
Sbjct: 318 EKPLYEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQ 375
Query: 320 CS-ANKKFFVSSSLDGTVRCYDLT 342
+ N+ +F+S S+DG VR ++++
Sbjct: 376 FNPVNENYFMSGSIDGKVRIWNIS 399
Score = 40.3 bits (90), Expect = 0.005
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRL 441
+W + L V H + V+S+ F+P + S S DG VR+W+ V + L
Sbjct: 353 LWKVGSNDCLGVFA-HNSYVTSVQFNP-VNENYFMSGSIDGKVRIWNISGCSV-VDWADL 409
Query: 442 NSDALQVAFRPDGEEIAVSTLDGNITFFEPS 472
V +RPDG+ + +L+G+ FF S
Sbjct: 410 KDIISAVCYRPDGQGGIIGSLNGSCRFFNMS 440
Score = 31.1 bits (67), Expect = 2.8
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH V +++S L SAS D TVRLW + NS V F P E
Sbjct: 326 GHTGEVLDISWSK---DNYLLSASMDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNE 381
Query: 456 EIAVS-TLDGNITFFEPSTC 474
+S ++DG + + S C
Sbjct: 382 NYFMSGSIDGKVRIWNISGC 401
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 41.1 bits (92), Expect = 0.003
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT------FHEHKATVSGVT-C 320
GH+ ++ L +S G + +GG D V +W+ + T F EH A V + C
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 321 SANKKFFVSSS--LDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
+ DG + ++ ++ + S V S + S E +A G
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV-CSLLWSKSERELLSAHGFTQN 352
Query: 379 EIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D T+RLW+
Sbjct: 353 QLTLWKYPSMVKMAELNGHTSRVLFMAQSP--DGCTVASAAGDETLRLWN 400
Score = 35.9 bits (79), Expect = 0.098
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SPDG V + D +++WN
Sbjct: 353 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 400
Score = 31.5 bits (68), Expect = 2.1
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 13/165 (7%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSS 331
+T + ++ DGL + G + +V+VW+ + T H++ V + + N +
Sbjct: 155 VTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSL--AWNNHILTTGG 212
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQDVFEIFVWSIKFG-- 388
+DG + D+ R R+ T + C + SG+ A+GG D + +W
Sbjct: 213 MDGKIVNNDV-RIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNV-VHIWDRSLASS 270
Query: 389 ----KLLEVLGGHEAPVSSLAFSPTLTSTRLASAS-WDGTVRLWD 428
+ L H A V +LA+ P S DG + W+
Sbjct: 271 NPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWN 315
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 189 TAVQYHKENKLLVTGFSSG--LFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFAC 246
TA + +++ S G + H NL H + ++ + +VSP G ++A A
Sbjct: 200 TATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGH-VDTNQLKNHMAAVSPNGRFLA-AA 257
Query: 247 PNIGQLLVWE--WQSE------QYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
+ VWE +Q + VM+ +GH +T L +SP+ ++T DG ++VWN
Sbjct: 258 AFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
Score = 39.9 bits (89), Expect = 0.006
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 309 HEHKA--TVSGVTCS---ANKKFFVSSSLDGT-VRCYDLTRYRNFRTLTSPSLVQFSCVA 362
HE ++ T+SG T + A+ ++S +GT + + RN + + L A
Sbjct: 188 HEKRSVLTISGATATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMA-A 246
Query: 363 LDSSGEFCAAGGQDVFEIFVWSI---KFGKLLEV-----LGGHEAPVSSLAFSPTLTSTR 414
+ +G F AA ++ VW I K G + EV L GH++ V+ L FSP S +
Sbjct: 247 VSPNGRFLAAAAFTA-DVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPN--SEQ 303
Query: 415 LASASWDGTVRLWD 428
+ +AS DG++R+W+
Sbjct: 304 IITASKDGSIRVWN 317
Score = 34.7 bits (76), Expect = 0.23
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
G + +C +++W ++ + + + L A SP+G + F VKVW
Sbjct: 208 GSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWE 267
Query: 299 TT---NGFC-----FVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL-TRY 344
+G + HK+ V+ + S N + +++S DG++R +++ RY
Sbjct: 268 IVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRY 322
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 41.1 bits (92), Expect = 0.003
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 279 SPDG-LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVR 337
+P G L V+T D V++++ TN F + +V+ ++ S + K
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATN-FALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECL 302
Query: 338 CYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK-FGKLLEVLGG 396
D + L FS A +G+ A G QD +W ++ + L+VL G
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSS-AWHPNGQILATGNQDT-TCRLWDVRNLSQSLKVLKG 360
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEE 456
+ + +L F T LA A V L+D QC+ I L + ++F PD E
Sbjct: 361 NMGAIRALRF--TSDGRFLAMAEPADFVHLFDTEAGYSQCQEIDLFGEIAGISFSPDTEA 418
Query: 457 IAVSTLD 463
+ V D
Sbjct: 419 LFVGVAD 425
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 41.1 bits (92), Expect = 0.003
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 284 HVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSG----VTCSANKKFFVSSSLDGTVRCY 339
H+ DG V+++ + +T++ V+G VT SA+ + S S DG +RC+
Sbjct: 167 HLAAACDDGCVRIYYISESDK-LTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCW 225
Query: 340 DLTR-YRNFR-TLTSPSLVQFS--CV-ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
D + +R T+ L S C+ +L S G + W + G LL+
Sbjct: 226 DANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQAH 285
Query: 395 GGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
H+ V++LA SP + R+ SA DG V L+
Sbjct: 286 SNHKGDVNALAASP--SHNRVFSAGADGQVILY 316
Score = 33.5 bits (73), Expect = 0.52
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL--- 341
+V+G G V+ W++ +G HK V+ + S + S+ DG V Y L
Sbjct: 262 LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGG 321
Query: 342 -TRYRNFRTLTSPSLVQFSCV 361
+R ++F+ ++ CV
Sbjct: 322 TSRSQDFKPSSAQKWDYIGCV 342
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG 302
G + W+ Q + H D+ LA SP V + G DG+V ++ + G
Sbjct: 269 GSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGG 321
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 40.7 bits (91), Expect = 0.003
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
+S + S N + SS D +VR YD V C DSSG F
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDSSG-FSVCAD 77
Query: 375 QDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
V I GK +VLG HE PV + +S + ++ + SWD T++ WD
Sbjct: 78 TKVRRI---DFNAGKE-DVLGTHEKPVRCVEYS--YAAGQVITGSWDKTIKCWD 125
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 311 HKATVSG-VTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
HK +S + + F++ S D V+ +D + P V + ++ +
Sbjct: 102 HKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 370 CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC 429
A G D ++ + I G L GH V S+ +S T + L + DG +R WD
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWS-TSSEWVLYTGGCDGAIRFWDI 220
Query: 430 IDREVQCEPIRLNSDALQVAFRP 452
R C + L++ Q+ RP
Sbjct: 221 --RRAGCFRV-LDNSQTQLGVRP 240
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 40.3 bits (90), Expect = 0.005
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTC-SANKKFFVSSSLDGTVRCYDLTR 343
V +G D KVKVW+ G C VT H+ V V + + +S S D TV D R
Sbjct: 230 VASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD-GR 288
Query: 344 YRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLE--VLGGHEAPV 401
+ L + + +A D E + + + L ++ H++ V
Sbjct: 289 DPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEV 348
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLWD 428
SS++++ LA+ S D +V+LWD
Sbjct: 349 SSISYN-IHAPNLLATGSADESVKLWD 374
Score = 32.7 bits (71), Expect = 0.92
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 372 AGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
A G + ++ VW + GK + HE V ++A++ T L S S D TV L D
Sbjct: 231 ASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWN-NYTPEVLLSGSRDRTVVLKD--G 287
Query: 432 REVQCEPIRLNSDAL--QVAFRPDGE-EIAVSTLDGNITFFE 470
R+ ++ +++A ++A+ P E VS DG + F+
Sbjct: 288 RDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFD 329
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 40.3 bits (90), Expect = 0.005
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 191 VQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIG 250
+++ K + LL + SG ++ ++ ++ + R + V+P + G
Sbjct: 203 LRFLKNHFLLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSG-G 261
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE 310
+ +W+ S+ +++ Q H ++ +A+ P+G + T G + K+K+W+ T H
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHS 321
Query: 311 -HKATVS----GVTCSANKKF--FVSSSLDGTVRCYDLTRYRN 346
H T+S G+ + F + S G+ Y TRY N
Sbjct: 322 FHAKTLSFSQKGLLAAGTGSFVQILGDSSGGSSHNY--TRYMN 362
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 40.3 bits (90), Expect = 0.005
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFV 328
H+ ++CL+ + + + + +D +KVW + C + H V+ V S +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 329 SSSLDGTVRCY------DLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFV 382
S S DGTV+ + T++ +TLT + +A+ +G G D F
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESA-VTALAVSKNGAAVYFGSSDGLVNFW 322
Query: 383 WSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
K +L GH+ V L + +L + S S D T+ +W
Sbjct: 323 EREKQLNYGGILKGHKLAVLCLEVAGSL----VFSGSADKTICVW 363
Score = 37.5 bits (83), Expect = 0.032
Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 285 VVTGGFDGKVKVWNT------TNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRC 338
V +G DG VK W T T + ++ V+ + S N S DG V
Sbjct: 262 VFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNF 321
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKL---LEVLG 395
++ + N+ + + C L+ +G +G D I VW + G + L VL
Sbjct: 322 WEREKQLNYGGILKGHKLAVLC--LEVAGSLVFSGSADK-TICVWK-RDGNIHTCLSVLT 377
Query: 396 GHEAPVSSLAFSPTLTSTRLASASW 420
GH PV LA ++ W
Sbjct: 378 GHTGPVKCLAVEADREASERRDKKW 402
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 39.9 bits (89), Expect = 0.006
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCY--DLTRY 344
+ +D +KVW + C + H H ++ V + F S+ DGTV+ + +L
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSA-DGTVKVWKRELQGK 310
Query: 345 RNFRTLTSPSLVQFSCV---ALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPV 401
TL L Q + V A+ S G D + K +L GH++ V
Sbjct: 311 GTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAV 370
Query: 402 SSLAFSPTLTSTRLASASWDGTVRLW--DCIDREVQC 436
L + L L S S D + +W D D+ QC
Sbjct: 371 LCLGIAGNL----LLSGSADKNICVWRRDPSDKSHQC 403
Score = 34.3 bits (75), Expect = 0.30
Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
Query: 285 VVTGGFDGKVKVW-------NTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVR 337
V TG DG VKVW T + V + A V+ + + S DG V
Sbjct: 291 VFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENA-VTALAVKSQSSIVYCGSSDGLVN 349
Query: 338 CYDLTRYRNFRTLTSPSLV--QFSCVALDSSGEFCAAGGQDVFEIFVW----SIKFGKLL 391
++ R+ R+ T L + + + L +G +G D I VW S K + L
Sbjct: 350 YWE----RSKRSFTGGILKGHKSAVLCLGIAGNLLLSGSADK-NICVWRRDPSDKSHQCL 404
Query: 392 EVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
VL GH PV LA + A AS R W
Sbjct: 405 SVLTGHMGPVKCLAVEEERACHQGAKASVAEGDRKW 440
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 397 HEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGEE 456
H VSSL+ L L S+SWD T+++W D + E I + DA+ +
Sbjct: 234 HNDAVSSLSLDVELGL--LYSSSWDTTIKVWRIADSKC-LESIHAHDDAINSVMSGFDDL 290
Query: 457 IAVSTLDGNI 466
+ + DG +
Sbjct: 291 VFTGSADGTV 300
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 39.9 bits (89), Expect = 0.006
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSSLDGTVRCYD 340
L V+T G D +KVW+ G TF H+A V V N +F S++LDG ++ +
Sbjct: 477 LCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWL 536
Query: 341 LTRYRNFRTLTSPS-LVQFSCVALDSSGEFCAAGGQDVFEIFV-WSIKFGKLLEVLGG-H 397
+ +P + D + F +D V W+ G + G H
Sbjct: 537 YDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFH 596
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ + + F T R +A D +++ WD
Sbjct: 597 KRSLGVVQFD--TTKNRYLAAGDDFSIKFWD 625
Score = 37.1 bits (82), Expect = 0.043
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D+T +I+ V E L GH+ +I G+ F L++ + QLC+W
Sbjct: 889 NNIIAIGMDDSTIQIYNVRVDE--VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
Score = 33.9 bits (74), Expect = 0.40
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 297 WNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
W +G V C A K +V S+ G + +++ ++ T P
Sbjct: 817 WQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPP 876
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
+ +A A G D I +++++ ++ L GH ++ LAFS L
Sbjct: 877 PAA-TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNV-- 933
Query: 415 LASASWDGTVRLWD 428
L S+ D + +W+
Sbjct: 934 LVSSGADAQLCVWN 947
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 196 ENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVW 255
+N V S G L M + T + ++ P + I + + ++
Sbjct: 845 KNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIY 904
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
+ ++ K +GHS +T LA+S +V+ G D ++ VWNT
Sbjct: 905 NVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 39.9 bits (89), Expect = 0.006
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSSLDGTVRCYD 340
L V+T G D +KVW+ G TF H+A V V N +F S++LDG ++ +
Sbjct: 477 LCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWL 536
Query: 341 LTRYRNFRTLTSPS-LVQFSCVALDSSGEFCAAGGQDVFEIFV-WSIKFGKLLEVLGG-H 397
+ +P + D + F +D V W+ G + G H
Sbjct: 537 YDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFH 596
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
+ + + F T R +A D +++ WD
Sbjct: 597 KRSLGVVQFD--TTKNRYLAAGDDFSIKFWD 625
Score = 37.1 bits (82), Expect = 0.043
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D+T +I+ V E L GH+ +I G+ F L++ + QLC+W
Sbjct: 889 NNIIAIGMDDSTIQIYNVRVDE--VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
Score = 33.9 bits (74), Expect = 0.40
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 297 WNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
W +G V C A K +V S+ G + +++ ++ T P
Sbjct: 817 WQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPP 876
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
+ +A A G D I +++++ ++ L GH ++ LAFS L
Sbjct: 877 PAA-TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNV-- 933
Query: 415 LASASWDGTVRLWD 428
L S+ D + +W+
Sbjct: 934 LVSSGADAQLCVWN 947
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 196 ENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVW 255
+N V S G L M + T + ++ P + I + + ++
Sbjct: 845 KNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIY 904
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
+ ++ K +GHS +T LA+S +V+ G D ++ VWNT
Sbjct: 905 NVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 39.5 bits (88), Expect = 0.008
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAK----DDIEKEKEYDSDRDAEQEQ 151
E ++AD + + +K + +NE EE+ D K DD E EKE +D D E E+
Sbjct: 221 EDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEK 280
Query: 152 NNSKVNSEENDKRLMYKK 169
S N ++ DK+ KK
Sbjct: 281 EES--NDDKEDKKEDIKK 296
Score = 30.3 bits (65), Expect = 4.9
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRL 165
K ++ +R + + + + EE + +DD E+EKE + + + E+ +N SE+ +L
Sbjct: 510 KTEEATRTNKKSVAHSDDESEE-EKEDDEEEEKEQEVEEEEEENENGIPDKSEDEAPQL 567
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 39.5 bits (88), Expect = 0.008
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 188 LTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACP 247
+ AV + + +G + G+ + NLI S +SS+ VSP G + A
Sbjct: 119 VNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTAST 178
Query: 248 NIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGK-VKVWNT 299
QL + + + K GH + C+A++ DG +V++ + + VW T
Sbjct: 179 ---QLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKT 228
Score = 34.7 bits (76), Expect = 0.23
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD-GTVRCYDLTR 343
+ +GG DG V + +G F TVS + S + K V++S T C DL +
Sbjct: 131 IYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTASTQLKTFNCSDLKK 190
Query: 344 YRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVW 383
+ F P +V+ CVA G++ + I VW
Sbjct: 191 IQKF--TGHPGVVR--CVAFTEDGKYVLSSAVGERYIAVW 226
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 39.5 bits (88), Expect = 0.008
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Query: 285 VVTGGFDGKVKVWNTTN---GFCFVTFHEHKATVSGVTC---SANKKFFVSSSLDGTVRC 338
+V GGF G++ + FC ++ A + + + F +S+ D VR
Sbjct: 203 LVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAIEIYNKPSGALHFTASNNDCGVRD 262
Query: 339 YDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE 398
+D+ RY+ + P V + +L G+ A G D E + GK LE L GH
Sbjct: 263 FDMERYQLVKHFRFPWPVNHA--SLSPDGKLLAIVG-DNPEGLIVDPNTGKTLETLSGHL 319
Query: 399 APVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ-VAFRPDGEEI 457
+ A+ P ++ + D T R+WD + ++ N A++ + + DG+ +
Sbjct: 320 DFSFASAWHP--DGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYM 377
Query: 458 AVS 460
A++
Sbjct: 378 AMA 380
Score = 31.9 bits (69), Expect = 1.6
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMT-CLAYSPDGLHVVTG 288
++ S+SP G +A N L+V + + + + GH LD + A+ PDG+ TG
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIV-DPNTGKTLETLSGH-LDFSFASAWHPDGVTFSTG 337
Query: 289 GFDGKVKVWNTTNGFCFVT-FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLT 342
D +VW+ N VT + + + +++ K+ + V YD++
Sbjct: 338 NQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVS 392
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 39.5 bits (88), Expect = 0.008
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 20/217 (9%)
Query: 227 EHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVV 286
E ++ + + GD + F+C +W + + + +GH+ + C S D ++
Sbjct: 10 ERPLTFLRYNREGD-LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLI 68
Query: 287 TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS---LDGTVRCYDLTR 343
TG D K+W+ +G TF + A V + + V ++ +D T +
Sbjct: 69 TGSADQTAKLWDVKSGKELFTF-KFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 344 YRNFRTLTSPSLVQFSC---------VALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL 394
+ + S++ C + +GG+D I +W + GKLL+
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKV-IRIWDAETGKLLKQS 186
Query: 395 G---GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
GH+ ++SL + + S D T +LWD
Sbjct: 187 DEEVGHKKDITSLC--KAADDSHFLTGSLDKTAKLWD 221
Score = 37.1 bits (82), Expect = 0.043
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 278 YSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE---HKATVSGVTCSANKKFFVSSSLDG 334
+ P +V+GG D +++W+ G E HK ++ + +A+ F++ SLD
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDK 215
Query: 335 TVRCYDLTRYRNFRTLTS 352
T + +D+ +T T+
Sbjct: 216 TAKLWDMRTLTLLKTYTT 233
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
+GH +T L Y+ +G + + D +W NG T+ H V S +
Sbjct: 7 KGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSR 66
Query: 327 FVSSSLDGTVRCYDL 341
++ S D T + +D+
Sbjct: 67 LITGSADQTAKLWDV 81
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.5 bits (88), Expect = 0.008
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 11/192 (5%)
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSSLDGTVRCYD 340
L V T G D +KVW+ G TF H+A V + N +F S++LDG ++ +
Sbjct: 477 LCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWL 536
Query: 341 LTRYRNFRTLTSPS-LVQFSCVALDSSGEFCAAGGQDVFEIFV-WSIKFGKLLEVLGG-H 397
+ +P + D + F +D V W+ G + G H
Sbjct: 537 YDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFH 596
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD---ALQVAFRPDG 454
+ + + F T R +A D +++ WD +D I + + ++ F +G
Sbjct: 597 KRSLGVVQFD--TTKNRYLAAGDDFSIKFWD-MDTIQLLTAIDADGGLQASPRIRFNKEG 653
Query: 455 EEIAVSTLDGNI 466
+AVS D I
Sbjct: 654 SLLAVSANDNMI 665
Score = 37.1 bits (82), Expect = 0.043
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D+T +I+ V E L GH+ +I G+ F L++ + QLC+W
Sbjct: 878 NNIIAIGMDDSTIQIYNVRVDE--VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
Score = 33.9 bits (74), Expect = 0.40
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 297 WNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
W +G V C A K +V S+ G + +++ ++ T P
Sbjct: 806 WQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPP 865
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
+ +A A G D I +++++ ++ L GH ++ LAFS L
Sbjct: 866 PAA-TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNV-- 922
Query: 415 LASASWDGTVRLWD 428
L S+ D + +W+
Sbjct: 923 LVSSGADAQLCVWN 936
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 196 ENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVW 255
+N V S G L M + T + ++ P + I + + ++
Sbjct: 834 KNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIY 893
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
+ ++ K +GHS +T LA+S +V+ G D ++ VWNT
Sbjct: 894 NVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 39.5 bits (88), Expect = 0.008
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 11/192 (5%)
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSSLDGTVRCYD 340
L V T G D +KVW+ G TF H+A V + N +F S++LDG ++ +
Sbjct: 477 LCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWL 536
Query: 341 LTRYRNFRTLTSPS-LVQFSCVALDSSGEFCAAGGQDVFEIFV-WSIKFGKLLEVLGG-H 397
+ +P + D + F +D V W+ G + G H
Sbjct: 537 YDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFH 596
Query: 398 EAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD---ALQVAFRPDG 454
+ + + F T R +A D +++ WD +D I + + ++ F +G
Sbjct: 597 KRSLGVVQFD--TTKNRYLAAGDDFSIKFWD-MDTIQLLTAIDADGGLQASPRIRFNKEG 653
Query: 455 EEIAVSTLDGNI 466
+AVS D I
Sbjct: 654 SLLAVSANDNMI 665
Score = 37.1 bits (82), Expect = 0.043
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D+T +I+ V E L GH+ +I G+ F L++ + QLC+W
Sbjct: 878 NNIIAIGMDDSTIQIYNVRVDE--VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
Score = 33.9 bits (74), Expect = 0.40
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 297 WNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTSPS 354
W +G V C A K +V S+ G + +++ ++ T P
Sbjct: 806 WQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPP 865
Query: 355 LVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTR 414
+ +A A G D I +++++ ++ L GH ++ LAFS L
Sbjct: 866 PAA-TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNV-- 922
Query: 415 LASASWDGTVRLWD 428
L S+ D + +W+
Sbjct: 923 LVSSGADAQLCVWN 936
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/104 (23%), Positives = 44/104 (42%)
Query: 196 ENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVW 255
+N V S G L M + T + ++ P + I + + ++
Sbjct: 834 KNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIY 893
Query: 256 EWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNT 299
+ ++ K +GHS +T LA+S +V+ G D ++ VWNT
Sbjct: 894 NVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 39.1 bits (87), Expect = 0.011
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVW-----------NTTNGFCFVTFHEHKATVSG 317
H + C +SPDG+ TGG D +K++ +T TF++H ++
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 89
Query: 318 VTCSANKKFFVSSSLDGTVRCYDL---TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
+ +SS+ D ++ +D T R F+ V+ ++ SGEF AG
Sbjct: 90 LDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVR--SISFHPSGEFLLAGT 147
Query: 375 Q----DVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++++ + G ++ + +S T + +AS DG +RL+D
Sbjct: 148 DHPIPHLYDVNTYQCFLPSNFPD-SGVSGAINQVRYSS--TGSIYITASKDGAIRLFD 202
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 39.1 bits (87), Expect = 0.011
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVW-----------NTTNGFCFVTFHEHKATVSG 317
H + C +SPDG+ TGG D +K++ +T TF++H ++
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 181
Query: 318 VTCSANKKFFVSSSLDGTVRCYDL---TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
+ +SS+ D ++ +D T R F+ V+ ++ SGEF AG
Sbjct: 182 LDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVR--SISFHPSGEFLLAGT 239
Query: 375 Q----DVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++++ + G ++ + +S T + +AS DG +RL+D
Sbjct: 240 DHPIPHLYDVNTYQCFLPSNFPD-SGVSGAINQVRYSS--TGSIYITASKDGAIRLFD 294
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 39.1 bits (87), Expect = 0.011
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVW--------NTTNGFCFVTFHEHKATVSGVT 319
GH+ ++ L +S G + +GG D V +W N T + F EH A V +
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLH-RFEEHTAAVRALA 274
Query: 320 -CSANKKFFVSSS--LDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
C + DG ++ ++ ++ + S V S + S E ++ G
Sbjct: 275 WCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV-CSLLWSKSERELLSSHGFT 333
Query: 377 VFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D T+RLW+
Sbjct: 334 QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSP--DGCTVASAAGDETLRLWN 383
Score = 35.9 bits (79), Expect = 0.098
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SPDG V + D +++WN
Sbjct: 336 QLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 383
Score = 33.1 bits (72), Expect = 0.69
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGF--DGKVKVWNTTNGFCFVTFHEHKATV 315
+ Q++ + + H+ + LA+ P + TGG DGK+K WNT G C + E + V
Sbjct: 256 TRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSV-ETGSQV 314
Query: 316 SGVTCSANKKFFVSS 330
+ S +++ +SS
Sbjct: 315 CSLLWSKSERELLSS 329
Score = 29.9 bits (64), Expect = 6.5
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSS 331
+T + ++ DGL + G + +V++W+ + T H++ V + + N +
Sbjct: 137 VTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL--AWNNHILTTGG 194
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQDVFEIFVW------- 383
+DG + D+ R R+ T + C + SG+ A+GG D + +W
Sbjct: 195 MDGKIVNNDV-RIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNV-VHIWDHRSVAS 252
Query: 384 SIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASAS-WDGTVRLWD 428
S + L H A V +LA+ P S DG ++ W+
Sbjct: 253 SNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 298
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 39.1 bits (87), Expect = 0.011
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 257 WQSE-QYVMKQQGHSLDMTCLAYSP-DGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKAT 314
W E Q +K H+ +TC+ ++P D + ++G D K+++WN +N V +++ K
Sbjct: 545 WDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNR-QVVEWNDLKEM 603
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCY 339
V+ V + + + S++G R Y
Sbjct: 604 VTAVCYTPDGQAAFVGSINGHCRLY 628
Score = 34.7 bits (76), Expect = 0.23
Identities = 38/214 (17%), Positives = 91/214 (42%), Gaps = 9/214 (4%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
S++ + GH D+ L++S L +++ D V++W+ C F H V+ V
Sbjct: 508 SDKPICSFTGHLDDVLDLSWSRSQL-LLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCV 565
Query: 319 TCSA-NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA--GGQ 375
+ ++ +F+S SLD +R ++++ + +V C D F + G
Sbjct: 566 QFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHC 625
Query: 376 DVFEIFVWSIKFGKLLEVLGGHEA---PVSSLAFSPTLTSTRLASASWDGTVRLWDCIDR 432
++ ++ +++ +A +++ FSP S L +++ D +R+ D +
Sbjct: 626 RLYSAEDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSA-DSRIRVLDGTEL 684
Query: 433 EVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
+ + + + ++ D + I ++ D +
Sbjct: 685 VQKFRGFKNMNSQMTASYTVDAKHIVCASEDSQV 718
Score = 30.3 bits (65), Expect = 4.9
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQVAFRPDGE 455
GH V L++S S L S+S D TVRLWD I+ + + N V F P E
Sbjct: 517 GHLDDVLDLSWS---RSQLLLSSSMDKTVRLWD-IETQSCLKLFAHNDYVTCVQFNPLDE 572
Query: 456 EIAVS-TLDGNITFFEPS 472
+ +S +LD I + S
Sbjct: 573 DYFISGSLDAKIRIWNIS 590
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.1 bits (87), Expect = 0.011
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSS 331
+T + ++PDG HV G + +V++W++ + T H++ V + + N +
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL--AWNNHILTTGG 242
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQD-VFEIFVWSIKFG- 388
+DG + D+ R R+ T Q C + SG+ A+GG D V I+ S+
Sbjct: 243 MDGLIINNDV-RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSN 301
Query: 389 ---KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG--TVRLWD 428
+ L L H + V +LA+ P + LA+ G T++ W+
Sbjct: 302 STTQWLHRLEEHTSAVKALAWCP-FQANLLATGGGGGDRTIKFWN 345
Score = 35.5 bits (78), Expect = 0.13
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 12/171 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW-------NTTNGFCFVTFHEHKATVSGVT 319
+GH+ ++ L +S G + +GG D V +W N+T + EH + V +
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLH-RLEEHTSAVKALA 321
Query: 320 CSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG--EFCAAGGQDV 377
+ +++ G R L S C L S E ++ G
Sbjct: 322 WCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQ 381
Query: 378 FEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D T+R W+
Sbjct: 382 NQLTLWKYPSMVKMAELTGHTSRVLYMAQSP--DGCTVASAAGDETLRFWN 430
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SPDG V + D ++ WN
Sbjct: 383 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 39.1 bits (87), Expect = 0.011
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSS 331
+T + ++PDG HV G + +V++W++ + T H++ V + + N +
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL--AWNNHILTTGG 232
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQD-VFEIFVWSIKFG- 388
+DG + D+ R R+ T Q C + SG+ A+GG D V I+ S+
Sbjct: 233 MDGLIINNDV-RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSN 291
Query: 389 ---KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG--TVRLWD 428
+ L L H + V +LA+ P + LA+ G T++ W+
Sbjct: 292 STTQWLHRLEEHTSAVKALAWCP-FQANLLATGGGGGDRTIKFWN 335
Score = 35.5 bits (78), Expect = 0.13
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 12/171 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVW-------NTTNGFCFVTFHEHKATVSGVT 319
+GH+ ++ L +S G + +GG D V +W N+T + EH + V +
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLH-RLEEHTSAVKALA 311
Query: 320 CSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSG--EFCAAGGQDV 377
+ +++ G R L S C L S E ++ G
Sbjct: 312 WCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQ 371
Query: 378 FEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D T+R W+
Sbjct: 372 NQLTLWKYPSMVKMAELTGHTSRVLYMAQSP--DGCTVASAAGDETLRFWN 420
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SPDG V + D ++ WN
Sbjct: 373 QLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.011
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
V+ G +G +++WN F ++V+ S DG + +++
Sbjct: 154 VLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLD 213
Query: 345 RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL-GGHEAPVSS 403
T S + ++ + G A G I +W++ +L V+ H++ + S
Sbjct: 214 EEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIIS 273
Query: 404 LAFSPTLTSTRLASASWDGTVRLW 427
L F L SAS D ++++W
Sbjct: 274 LNF--LANEPVLMSASADNSLKMW 295
Score = 39.1 bits (87), Expect = 0.011
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 11/191 (5%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTF- 308
G L +W +++ + + +G +T SP V G DGK+ V N VTF
Sbjct: 161 GPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFE 220
Query: 309 HEHKATVSGVTCSAN-KKFFVSSSLDGTVRCYDLTRYR---NFRTLTSPSLVQFSCVALD 364
H + V+ ++ S + + S G + ++L + R R S++ + +A
Sbjct: 221 HASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLA-- 278
Query: 365 SSGEFCAAGGQDVFEIFVWSIKFG--KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG 422
+ +A + +++++ G +LL GH AP + F + SA D
Sbjct: 279 NEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYS--NGRHILSAGQDR 336
Query: 423 TVRLWDCIDRE 433
RL+ I +
Sbjct: 337 AFRLFSVIQEQ 347
Score = 33.5 bits (73), Expect = 0.52
Identities = 39/213 (18%), Positives = 89/213 (41%), Gaps = 9/213 (4%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G L VW+++ + + Q + + Y + T D +++++ F
Sbjct: 496 GDLKVWDFKKRE-LKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFR 554
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
H ++ + S + K+ +SSS+DG++R +D+ + + V + ++L + +
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVD--VPITALSLSPNMDV 612
Query: 370 CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDC 429
A D +++W + + G + V S A + + +L S S + D
Sbjct: 613 LATAHSDQNGVYLWVNQ-----SMFSGLPS-VESYASGKDVVNVKLPSVSALTSSEADDD 666
Query: 430 IDREVQCEPIRLNSDALQVAFRPDGEEIAVSTL 462
+DR+V L + + ++ + E + +S L
Sbjct: 667 MDRQVLENSEALQASSFSISQKQIPELVTLSLL 699
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 38 LLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 96
LLA + D +++ V L+ + + GHTD+I + F +I+ S +G L +W+
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFR--GHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 38.7 bits (86), Expect = 0.014
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 252 LLVWEWQS---EQYVMKQQGHSLDMTCLAYSPDGLHVV-TGGFDGKVKVWNTTN-GFCFV 306
LL+W+ +S + V HS+++ CLA++P VV TG D VK+++
Sbjct: 252 LLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALH 311
Query: 307 TFHEHKATVSGVTCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTL 350
TF HK V V + N+ S L + +DL+R +T+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTV 356
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 38.7 bits (86), Expect = 0.014
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVT------FHEHKATVSGVT-C 320
GH+ ++ L +S G +GG D V +W+ + T F EH A V + C
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 321 SANKKFFVSSS--LDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVF 378
+ DG ++ ++ ++ + S V S + S E ++ G
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV-CSLLWSQSERELLSSHGFTQN 368
Query: 379 EIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D +RLW+
Sbjct: 369 QLTLWKYPSMSKMAELNGHTSRVLFMAQSP--NGCTVASAAGDENLRLWN 416
Score = 35.1 bits (77), Expect = 0.17
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 258 QSEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGF--DGKVKVWNTTNGFCFVTFHEHKAT 314
Q+ Q++ + + H+ + LA+ P + TGG DGK+K WNT G C + E +
Sbjct: 288 QTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSV-ETGSQ 346
Query: 315 VSGVTCSANKKFFVSS 330
V + S +++ +SS
Sbjct: 347 VCSLLWSQSERELLSS 362
Score = 35.1 bits (77), Expect = 0.17
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SP+G V + D +++WN
Sbjct: 369 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 416
Score = 29.9 bits (64), Expect = 6.5
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH-EHKATVSGVTCSANKKFFVSSS 331
+T + ++ DGL + G + +V++W+ + T H++ V + + + +
Sbjct: 171 VTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL--AWDNHILTTGG 228
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQD-VFEIFVWSIKFGK 389
+DG + D+ R R+ T + C + SG A+GG D V I+ S+ K
Sbjct: 229 MDGKIVNNDV-RIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSK 287
Query: 390 ----LLEVLGGHEAPVSSLAFSPTLTSTRLASAS-WDGTVRLWD 428
L H A V +LA+ P S DG ++ W+
Sbjct: 288 QTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 331
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 38.7 bits (86), Expect = 0.014
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTG-GFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKK 325
+GHS +T +A+ + +H++ DGKV VW + G + + ++ ++G A +
Sbjct: 218 RGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEG----SEGDEQSQITGKIVVALQI 273
Query: 326 FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
+ V C+ + +++ + F A + + + +
Sbjct: 274 LGEEDTKHPRV-CWHCHKQEILVVSIGKHVLRIDTTKVGRGEVFSA---EAPLQCHLDKL 329
Query: 386 KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
G ++++G H+ V+ L+ +T TRL S+S DGTV++W DR+ Q + D
Sbjct: 330 IDG--VQIVGKHDGEVTDLSMCQWMT-TRLVSSSVDGTVKIWQ--DRKTQPLVVLRPHDG 384
Query: 446 LQV 448
L V
Sbjct: 385 LPV 387
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 38.3 bits (85), Expect = 0.018
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 367 GEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRL 426
G+ C I VW ++ K VL GH V S+ PT S L S S DG L
Sbjct: 139 GDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT-NSDLLVSGSRDGCFAL 197
Query: 427 WD 428
WD
Sbjct: 198 WD 199
Score = 35.5 bits (78), Expect = 0.13
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLLEV-LGGHEAPVSSLAFSPTLTSTRLASASWD 421
+ GE+ +G D ++W + ++ + L GH+ V+++ +SP+ ++A+AS D
Sbjct: 346 ISPDGEYVLSGSSDG-NAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIG-KVATASDD 403
Query: 422 GTVRLWD 428
TVRLW+
Sbjct: 404 FTVRLWN 410
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS--ANKKFFVSSSLDGTVRCYDL 341
++T D +KVW+ C H TV + CS N VS S DG +DL
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM-CSHPTNSDLLVSGSRDGCFALWDL 200
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 38.3 bits (85), Expect = 0.018
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 269 HSLDMTCLAYSPDG--LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANK 324
H+ ++ LA+S L VVT G D +KVW+ G TF H+A V V N
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 325 KFFVSSSLDGTVRCY 339
+F S+++DG ++ +
Sbjct: 523 QFIFSTAVDGKIKAW 537
Score = 37.1 bits (82), Expect = 0.043
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTS 352
++W ++G V C A K +V S+ G + +++ ++ T +
Sbjct: 825 QLWQPSSGVLMTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMA 884
Query: 353 PSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTS 412
P S +A A G D I +++++ ++ L GH+ V+ LAFS L
Sbjct: 885 PPPAATS-LAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNV 943
Query: 413 TRLASASWDGTVRLW 427
L S+ D + +W
Sbjct: 944 --LVSSGADSQLCVW 956
Score = 34.3 bits (75), Expect = 0.30
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D++ +I+ V E L GH ++ G+ F L++ + QLC+W
Sbjct: 899 NNIIAIGMDDSSIQIYNVRVDE--VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 31.5 bits (68), Expect = 2.1
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPI 439
I VW G L GHEAPV S+ + S + DG ++ W + + +
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYD 549
Query: 440 RLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQ 499
+A+ DG + F E G+V+ R+ LG G+ +V
Sbjct: 550 APGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVK-RTYLGLGKRSVGVVQFD 608
Query: 500 TL 501
T+
Sbjct: 609 TM 610
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 38.3 bits (85), Expect = 0.018
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 269 HSLDMTCLAYSPDG--LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANK 324
H+ ++ LA+S L VVT G D +KVW+ G TF H+A V V N
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 325 KFFVSSSLDGTVRCY 339
+F S+++DG ++ +
Sbjct: 523 QFIFSTAVDGKIKAW 537
Score = 37.1 bits (82), Expect = 0.043
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 295 KVWNTTNGFCFVTFHEHKATVSGVTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTS 352
++W ++G V C A K +V S+ G + +++ ++ T +
Sbjct: 825 QLWQPSSGVLMTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMA 884
Query: 353 PSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTS 412
P S +A A G D I +++++ ++ L GH+ V+ LAFS L
Sbjct: 885 PPPAATS-LAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNV 943
Query: 413 TRLASASWDGTVRLW 427
L S+ D + +W
Sbjct: 944 --LVSSGADSQLCVW 956
Score = 34.3 bits (75), Expect = 0.30
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G D++ +I+ V E L GH ++ G+ F L++ + QLC+W
Sbjct: 899 NNIIAIGMDDSSIQIYNVRVDE--VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 31.5 bits (68), Expect = 2.1
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPI 439
I VW G L GHEAPV S+ + S + DG ++ W + + +
Sbjct: 490 IKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLYDNMGSRVDYD 549
Query: 440 RLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLGSGRAETDLVTPQ 499
+A+ DG + F E G+V+ R+ LG G+ +V
Sbjct: 550 APGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVK-RTYLGLGKRSVGVVQFD 608
Query: 500 TL 501
T+
Sbjct: 609 TM 610
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 38.3 bits (85), Expect = 0.018
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 240 DWIAFACPNIGQLLVWEWQSEQYVMKQ-QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
D +A+ + G L V E V+KQ GHS D+T +S + ++ + D ++VW
Sbjct: 186 DILAYGASD-GSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWE 244
Query: 299 TTNGFC 304
+ G C
Sbjct: 245 LSRGVC 250
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H V+ S+N ++ SSSLD T+R ++L+R R + S Q+ + F
Sbjct: 215 HSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGIS-PQYCIRFHPVNNNFL 273
Query: 371 AAGGQDVFEIFVWSIKFGKLLEVL 394
+AG + E+ V++ G++++ L
Sbjct: 274 SAGNANK-ELTVFNFSTGRIIKKL 296
Score = 30.3 bits (65), Expect = 4.9
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 366 SGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVR 425
S + A G D ++ +L+ L GH V+ FS + +AS+S D T+R
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSN--NQYIASSSLDKTIR 241
Query: 426 LWDCIDREVQCEPIRLNSDALQVAFRP-DGEEIAVSTLDGNITFFEPST 473
+W+ + R V I S + F P + ++ + +T F ST
Sbjct: 242 VWE-LSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFNFST 289
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 37.9 bits (84), Expect = 0.024
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
+ +G G VK+W+T C F+ H+ +SG+T +++ V +S DGT+ +L
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNL 107
Score = 31.9 bits (69), Expect = 1.6
Identities = 34/179 (18%), Positives = 69/179 (38%), Gaps = 3/179 (1%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G + +W+ + + H ++ + ++ D + +V DG + V N
Sbjct: 58 GCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSE 117
Query: 310 EHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEF 369
+ + V N + + + +GT+ Y +++ L S AL E
Sbjct: 118 FSEDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSD-RFVDLAPNSVDALLKLDED 176
Query: 370 CAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
G D I + I ++++ +G H+ P+ LA S L S + D ++LW+
Sbjct: 177 RLITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSH--DKKFLGSTAHDSMLKLWN 233
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 37.5 bits (83), Expect = 0.032
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 17/254 (6%)
Query: 221 HTLSISEHRISSISVSPPGDWIAFACPNIG-QL--LVWEWQSEQYVMKQ----QGHSLDM 273
HTL S+ ++SV P GD+ + G +L LV + K+ Q L
Sbjct: 67 HTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGATGITILAKELLPLQNAGLQK 126
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
C+A+S DG + GG DG +++ N + + ++ + S + +F ++S D
Sbjct: 127 -CMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTD 185
Query: 334 GTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGE----FCAAGGQDVFEIFVWSIKFGK 389
G+ R + TL G FCAA D + V+ I K
Sbjct: 186 GSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWK 245
Query: 390 LLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREV--QCEPIRLNSDALQ 447
L S++A S L +A DG V + + E+ + + L
Sbjct: 246 KLGFKKLSRKTASTMAVS--LDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIAS 303
Query: 448 VAFRPDGEEIAVST 461
+ F P E + ++T
Sbjct: 304 LEFCP-SERVMLTT 316
Score = 37.5 bits (83), Expect = 0.032
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 20/184 (10%)
Query: 250 GQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH 309
G L + EW + ++ + + + +S D + T DG ++W +GF T
Sbjct: 144 GCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLE 203
Query: 310 ---EHKATVSGVTCSANKKFFVSSSLDG---TVRCYDLTRYR--NFRTLTSPSLVQFSCV 361
+ + + K F ++ G V YD++ ++ F+ L+ + S +
Sbjct: 204 RSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFKKLSRKTA---STM 260
Query: 362 ALDSSGEFCAAGGQD----VFEIFVWSI-KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLA 416
A+ G++ A GG+D V E+ I + K L LG ++SL F P+
Sbjct: 261 AVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLH-LG---QSIASLEFCPSERVMLTT 316
Query: 417 SASW 420
S+ W
Sbjct: 317 SSEW 320
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 37.1 bits (82), Expect = 0.043
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 333 DGTVRCYDLTRYRNFRTLTSPSLVQFSCVAL--DSSGEFCAAGGQDVFEIFVWSIKFGKL 390
DGT+R ++ + + +TL + S S +L SG+F + G + VW +
Sbjct: 163 DGTLRVFE---WPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAPLCR--VWDVNASAA 217
Query: 391 LEVLGGHEAPV-SSLAFSPTLTSTRL----ASASWDGTVRLWDCID-REVQCEPIRLNSD 444
+ L + + +S FS + + + A+ G++ WD R + I+ N+
Sbjct: 218 IASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNS 277
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLG 487
DG+ +AV TL+G++ + ST QT + ++ LG
Sbjct: 278 ISAFNVSADGKLLAVGTLEGDVLIID-STKMQTNQIVKKAHLG 319
Score = 35.9 bits (79), Expect = 0.098
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 233 ISVSPPGDWIAFACPNIGQLLVWE-------WQSEQYVMKQQGHSLDMTCLAYSPDGLHV 285
+++ P + A PN +L WE + + V+K+ L+++ DG +
Sbjct: 98 MAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVL 157
Query: 286 VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYR 345
TG DG ++V+ + + + A+V +T S + KF VS R +D+
Sbjct: 158 ATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAP-LCRVWDVNASA 216
Query: 346 NFRTLTSPSLVQF-SC-VALDSSGE---FCAAGGQDVFEIFVW 383
+L+ F SC ++D+SG + AA Q I W
Sbjct: 217 AIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITW 259
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 37.1 bits (82), Expect = 0.043
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 333 DGTVRCYDLTRYRNFRTLTSPSLVQFSCVAL--DSSGEFCAAGGQDVFEIFVWSIKFGKL 390
DGT+R ++ + + +TL + S S +L SG+F + G + VW +
Sbjct: 163 DGTLRVFE---WPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAPLCR--VWDVNASAA 217
Query: 391 LEVLGGHEAPV-SSLAFSPTLTSTRL----ASASWDGTVRLWDCID-REVQCEPIRLNSD 444
+ L + + +S FS + + + A+ G++ WD R + I+ N+
Sbjct: 218 IASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNS 277
Query: 445 ALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLG 487
DG+ +AV TL+G++ + ST QT + ++ LG
Sbjct: 278 ISAFNVSADGKLLAVGTLEGDVLIID-STKMQTNQIVKKAHLG 319
Score = 35.9 bits (79), Expect = 0.098
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 233 ISVSPPGDWIAFACPNIGQLLVWE-------WQSEQYVMKQQGHSLDMTCLAYSPDGLHV 285
+++ P + A PN +L WE + + V+K+ L+++ DG +
Sbjct: 98 MAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVL 157
Query: 286 VTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYR 345
TG DG ++V+ + + + A+V +T S + KF VS R +D+
Sbjct: 158 ATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGAP-LCRVWDVNASA 216
Query: 346 NFRTLTSPSLVQF-SC-VALDSSGE---FCAAGGQDVFEIFVW 383
+L+ F SC ++D+SG + AA Q I W
Sbjct: 217 AIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITW 259
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 37.1 bits (82), Expect = 0.043
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 363 LDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDG 422
L GE+ A+G D F+W + G+L++VL G E+ ++ + P + +A++ D
Sbjct: 629 LGQRGEYIASGSDDG-RWFIWEKQTGRLMKVLVGDESVLNCIQCHP--FDSVVATSGIDN 685
Query: 423 TVRLW 427
T+++W
Sbjct: 686 TIKIW 690
Score = 35.1 bits (77), Expect = 0.17
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
G++IA + G+ +WE Q+ + + G + C+ P V T G D +K+W+
Sbjct: 633 GEYIASGSDD-GRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 691
Query: 299 TT 300
T
Sbjct: 692 PT 693
Score = 33.5 bits (73), Expect = 0.52
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 359 SCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLG-GHEAPVSSLAFSPTLTSTRLAS 417
+ +A +S+G +G D+ I +W+ KLL + GH A + F P + + S
Sbjct: 54 NALAWNSNGSLLISGSDDL-RINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVS 112
Query: 418 ASWDGTVRLWD 428
+ D VRL++
Sbjct: 113 GAGDAEVRLFN 123
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 37.1 bits (82), Expect = 0.043
Identities = 42/215 (19%), Positives = 89/215 (41%), Gaps = 10/215 (4%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGV 318
S++ V +GH + L++S L +++ D V++W+ C F H V+ +
Sbjct: 495 SDKPVCSLKGHLDAILDLSWSKSQL-LLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCI 552
Query: 319 TCS-ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAA--GGQ 375
S ++ +F+S SLD +R + + +V +C D G + G
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGIC 612
Query: 376 DVFEIFVWSIKFGKLLEVLGGHEA----PVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
++ + ++V ++ ++S FSP S L +++ D +R+ D +
Sbjct: 613 RAYDTEDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSA-DSRIRILDGSE 671
Query: 432 REVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
+ + R L ++ DG+ I ++ D +
Sbjct: 672 VIHKFKGFRNTCSQLSASYSQDGKYIICASEDSQV 706
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 36.7 bits (81), Expect = 0.056
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 374 GQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
G D IF+W K GKL+ + G V+ L P + LAS + +V+LW + +
Sbjct: 339 GSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHI--PLLASCGIEKSVKLWTPMSND 396
Query: 434 VQCEPIRLN 442
V P +++
Sbjct: 397 VLSLPEKID 405
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 36.7 bits (81), Expect = 0.056
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQ 435
++++G H+ V+ L+ +T TRL S+S DGT+++W DR+ Q
Sbjct: 314 VQIVGKHDGEVTDLSMCQWMT-TRLVSSSVDGTIKIWQ--DRKAQ 355
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 36.7 bits (81), Expect = 0.056
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQ 435
++++G H+ V+ L+ +T TRL S+S DGT+++W DR+ Q
Sbjct: 349 VQIVGKHDGEVTDLSMCQWMT-TRLVSSSVDGTIKIWQ--DRKAQ 390
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 36.7 bits (81), Expect = 0.056
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 264 MKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFH--EHKATVSGVTCS 321
M Q G +T L Y GL + +G DG ++VWN + + EHK+TV+ + S
Sbjct: 848 MHQSGSGA-VTALIYHK-GL-LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLS 904
Query: 322 ANKKFFVSSSLDGTVRCYDLTR 343
+ +S S D T+R + + +
Sbjct: 905 ETGECVLSGSADKTIRVWQIVK 926
Score = 32.7 bits (71), Expect = 0.92
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 380 IFVWSI--KFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCE 437
I VW++ K LL + H++ V+ FS + T + S S D T+R+W + +++C
Sbjct: 875 IRVWNVNKKIATLLWDIKEHKSTVT--CFSLSETGECVLSGSADKTIRVWQIVKGKLECA 932
Query: 438 PIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQT 477
+ D+++ G I V T + + S Q+
Sbjct: 933 EVIKTKDSIR-KLEAFGNMIFVITKGHKMKLLDSSRISQS 971
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 36.7 bits (81), Expect = 0.056
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 268 GHSLDMTCLAYSPDGL-HVVTGGFDGKVKVWNTTNGFCFVT---FHEHKATVSGVTCS-A 322
GH + + +SP +++G + +W +G V F H A+V + S A
Sbjct: 221 GHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPA 280
Query: 323 NKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD--VFEI 380
+ F S S+DG+V +D+ ++ + ++ + A G D F I
Sbjct: 281 EENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSI 340
Query: 381 -FVWSIKFG-KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEP 438
+ IK G ++ H+ P++S+ +S ST LA S D + +WD + + E
Sbjct: 341 RDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEAST-LAVTSGDNQLTIWDLSLEKDEEEE 399
Query: 439 IRLNSDALQVAFRP 452
N+ ++ P
Sbjct: 400 AEFNAQTKELVNTP 413
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 36.7 bits (81), Expect = 0.056
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDA--KDDIEKEKEYDSDRDAEQEQNN 153
E+ +D DE ++ D + + + + EEE +DD +EK + D E N
Sbjct: 415 ESDLDKDEKSLVLDKPEQDELRTAERDDKAEEELKTAERDDSAEEKIQEPDAQISSENGN 474
Query: 154 -SKVNSEENDKRL-MYKKLGRHYIGDAIRNADRKV 186
+ N++ +D+R + K+ H+ D + + RK+
Sbjct: 475 VASENTKPSDRRASLPAKIENHHQDDGLTQSGRKI 509
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 36.7 bits (81), Expect = 0.056
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 77 ERKSLDLITVSRNGQLCLWEASIDADELAVKQDDTSRKKRVRLQNEGNLEEE----FDAK 132
ER+ D V R + S D+++ V+++D K+RV + G+ E E D K
Sbjct: 80 ERRRRDKDRVKRRSER---RKSSDSED-DVEEEDERDKRRVNEKERGHREHERDRGKDRK 135
Query: 133 DDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQ 192
D E+E+ D +R+ E+++ + EE +K + K+ R D R+ + K +
Sbjct: 136 RDREREERKDKEREREKDRERREREREEREKERV-KERERREREDGERDRREREKERGSR 194
Query: 193 YHKENK 198
++E +
Sbjct: 195 RNRERE 200
Score = 36.3 bits (80), Expect = 0.074
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 98 SIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVN 157
S D+++ + DD R+KR + E ++ K E+ K DS+ D E+E
Sbjct: 56 SSDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEE------- 108
Query: 158 SEENDKRLMYKKLGRHYIGDAIRNADRK 185
+E DKR + +K H + R DRK
Sbjct: 109 -DERDKRRVNEKERGHREHERDRGKDRK 135
Score = 32.3 bits (70), Expect = 1.2
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLM 166
++ + +++ R++ E E +D E+EKE S R+ E+E++ +V +EE+D +
Sbjct: 157 REREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSR-EVGNEESDDDVK 215
Query: 167 YKKLGRHYIGDAIRNADRKVKLTAVQYHKEN 197
R G + +R+ + H+++
Sbjct: 216 RDLKRRRKEGGERKEKEREKSVGRSSRHEDS 246
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDK 163
+++ RKKRV+ + E+++D DD E+EK + +R+ + + E K
Sbjct: 44 RREKDRRKKRVKSSDS---EDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRK 97
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 36.3 bits (80), Expect = 0.074
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEGNLEEEFD-AKDDIEKEKEYDSDRDAEQEQNNSKVNS 158
+ DE VK D+ + V N+ +++ D A++D E+E E + D +AE+E+ +
Sbjct: 43 EGDE-EVKHDEAEEDQEVVKPNDAEEDDDGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEE 101
Query: 159 EEND 162
EE +
Sbjct: 102 EEEE 105
Score = 32.7 bits (71), Expect = 0.92
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 122 EGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNS 158
E + EEE +A++D E E+E + + + E+E+ +SK S
Sbjct: 75 EEDEEEEVEAEEDEEAEEEEEEEEEEEEEEEDSKERS 111
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/56 (19%), Positives = 33/56 (58%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEEND 162
++DD + E EE+ +A+++ E+E+E + + + +E++ S ++ ++++
Sbjct: 66 EEDDDGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEEEEEEDSKERSPSSISGDQSE 121
>At4g21180.1 68417.m03063 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 661
Score = 36.3 bits (80), Expect = 0.074
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 93 CLWEASIDADE-LAVKQDDTSRKKRVRLQN-EGNLEEEFDAKDDIEKEKEYDSDRDAEQE 150
CL + I D+ ++K + R + V +N E LEEE D ++ + E EY D + ++
Sbjct: 582 CLSDTWIGCDQKTSLKVEVLKRTRDVEGENAEEGLEEEDDEIEEEDYESEYSEDEEDKKR 641
Query: 151 QNNSKVNSEENDK 163
+ KVN E + +
Sbjct: 642 GSKKKVNKESSSE 654
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 36.3 bits (80), Expect = 0.074
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 265 KQQGHSLDMTCLAYSPDGLHVV-TGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCS-A 322
K+ H+ + LA++ + +++ + D KVKVW+ G C +T H V V +
Sbjct: 260 KEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHY 319
Query: 323 NKKFFVSSSLDGTVRCYD--LTRYRNFRTLTSPSLVQFS----CV-ALDSSGEFCAAGGQ 375
+ +S S D TV D + F+ + + C + S E G
Sbjct: 320 APEVLLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGF 379
Query: 376 DVFEIFVWSIKFGKLLEVLGGH--EAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDRE 433
D+ S + H + VSS++++ + T LA+ S D +V+LWD + E
Sbjct: 380 DIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNIS-TPNLLATGSMDKSVKLWDLSNNE 438
Query: 434 VQC 436
C
Sbjct: 439 PSC 441
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 36.3 bits (80), Expect = 0.074
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
T + YS + V++ GFD K+K W+T V + V VT S N + +D
Sbjct: 98 TSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFSTDAGGAVGCVTVSGNN---LVVCVD 154
Query: 334 GTVRCYDLTRY-RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
++ YDL F++ S V C+ A G D
Sbjct: 155 ASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVD 198
Score = 31.1 bits (67), Expect = 2.8
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
G LE E VS L FSP S L ASWD +RL+D + E LNS A
Sbjct: 3 GDRLEFENPIEDAVSRLRFSPQ--SNNLLVASWDSYLRLYDVESSSLSLE---LNSQA 55
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 36.3 bits (80), Expect = 0.074
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLD 333
T + YS + V++ GFD K+K W+T V + V VT S N + +D
Sbjct: 98 TSIVYSYEKGEVISTGFDEKIKFWDTRQRESLVFSTDAGGAVGCVTVSGNN---LVVCVD 154
Query: 334 GTVRCYDLTRY-RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQD 376
++ YDL F++ S V C+ A G D
Sbjct: 155 ASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGYAVGSVD 198
Score = 31.1 bits (67), Expect = 2.8
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 388 GKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDA 445
G LE E VS L FSP S L ASWD +RL+D + E LNS A
Sbjct: 3 GDRLEFENPIEDAVSRLRFSPQ--SNNLLVASWDSYLRLYDVESSSLSLE---LNSQA 55
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 35.9 bits (79), Expect = 0.098
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 100 DADELAVKQDDTSRKKR--VRLQNEGNLEEEFD---AKDDIEKEKEYDSDRDAEQEQNNS 154
D ++ AV +++ +KK+ +LQ G+ +E D A+++ K+K+ +D E +
Sbjct: 75 DGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIAEEEEPKKKKKKQRKDTEAKSEEE 134
Query: 155 KVNSEENDKRL 165
+V +E +K+L
Sbjct: 135 EVEDKEEEKKL 145
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.9 bits (79), Expect = 0.098
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 9/175 (5%)
Query: 308 FHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFR-TLTSPSLVQFSCVALDSS 366
F + + V V+SS D ++R +D+ + + T C S
Sbjct: 20 FSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPS 79
Query: 367 GEFCAA--GGQDVFEIFVW-SIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGT 423
C++ + E + S+ ++L GH+ V SL SP S S S D +
Sbjct: 80 SLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDS--FMSGSLDRS 137
Query: 424 VRLWDCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTG 478
VRLWD R C+ I VA+ G A++ G + F+ S C G
Sbjct: 138 VRLWDL--RVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFD-SRCYDKG 189
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKF 326
QG ++ T ++PDG +V++G DG + WN N + + VS + + +
Sbjct: 244 QGTPIEAT---FTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAM 300
Query: 327 FVSSS 331
FV++S
Sbjct: 301 FVAAS 305
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 35.9 bits (79), Expect = 0.098
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 315 VSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGG 374
+S + S N + SS D VR YD++ V C D SG F
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCCFHDDFSG-FSVGAD 78
Query: 375 QDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
V I V+++ GK ++LG H+ V + +S + ++ + SWD TV+ WD
Sbjct: 79 YKVRRI-VFNV--GKE-DILGTHDKAVRCVEYS--YAAGQVITGSWDKTVKCWD 126
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 35.9 bits (79), Expect = 0.098
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIE-KEKEYDSDRDAEQEQNNS 154
E +E + Q++T K+ +++ E +E +++ E KEKE S ++ +E+ N
Sbjct: 524 ETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENE 583
Query: 155 KVNSEEN 161
K+ EE+
Sbjct: 584 KIEKEES 590
Score = 34.3 bits (75), Expect = 0.30
Identities = 14/63 (22%), Positives = 35/63 (55%)
Query: 99 IDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNS 158
I+ +E + +++ + + + E + +EE K++ + EKE + ++ +E+ N K+
Sbjct: 547 IEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEK 606
Query: 159 EEN 161
EE+
Sbjct: 607 EES 609
Score = 33.1 bits (72), Expect = 0.69
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 103 ELAVKQDDTSRKKRVRLQNEGNL-EEEFDAKDDIEKEKEYDSDRDAEQEQN---NSKVNS 158
E + Q++T K+ +++ E + +EE K+ KEKE S ++++ N K
Sbjct: 588 EESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQV 647
Query: 159 EENDKR 164
EEN+K+
Sbjct: 648 EENEKK 653
Score = 29.9 bits (64), Expect = 6.5
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 102 DELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIE---KEKEYDSDRD-AEQEQNNSKVN 157
+E K+D+T K+ Q E E+E + KD+ E +E+ D + + E+E+ +S+
Sbjct: 499 EETKEKEDETKEKEESSSQ-EKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEE 557
Query: 158 SEENDKRLMYKK 169
S+EN+ K+
Sbjct: 558 SKENETETKEKE 569
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/70 (20%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
E + + + +++++++ ++ + + +E+E A + KEKE ++ E N S+
Sbjct: 575 EETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQ 634
Query: 156 VN-SEENDKR 164
N + E++K+
Sbjct: 635 ENVNTESEKK 644
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNS 158
D +E + +++ R+ + + E + +EE K+ KEK S ++ +++ K+ S
Sbjct: 437 DKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIES 495
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 35.9 bits (79), Expect = 0.098
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 269 HSLD-MTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHE-HKATVSGVTCSANKKF 326
H +D ++ LA S DG + + +D K+W T++ C + + H ++ + S + F
Sbjct: 190 HHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKD-GF 248
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLT-SPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
+ S D ++ ++ ++ T + L + +A+ G+ +G D I VW
Sbjct: 249 VYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACD-RSILVWER 307
Query: 386 KFG--------KLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
++ L GH + LA + S + S S D ++R+W
Sbjct: 308 LINGDDEELHMSVVGALRGHRKAIMCLA----VASDLVLSGSADKSLRVW 353
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 35.5 bits (78), Expect = 0.13
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G +D+T I+ V E L GH +I G+ F L++ + Q+C W
Sbjct: 874 NNVIAIGMEDSTIHIYNVRVDE--VKSKLKGHQKRITGLAFSTALNILVSSGADAQICFW 931
Query: 96 EASIDADE 103
SID E
Sbjct: 932 --SIDTWE 937
Score = 32.7 bits (71), Expect = 0.92
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK 386
+V S+ G V +++ ++ T P A G +D I +++++
Sbjct: 834 YVMSAAGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDS-TIHIYNVR 892
Query: 387 FGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
++ L GH+ ++ LAFS L L S+ D + W
Sbjct: 893 VDEVKSKLKGHQKRITGLAFSTALNI--LVSSGADAQICFW 931
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 35.5 bits (78), Expect = 0.13
Identities = 13/49 (26%), Positives = 29/49 (59%)
Query: 122 EGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKL 170
E ++E + K+D++K+ DSD D +++ N +K N K+ + +++
Sbjct: 115 EDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRM 163
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 35.5 bits (78), Expect = 0.13
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFF 327
GH ++ L + + +G +DG + +WN + + H++ + + ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRER-V 319
Query: 328 VSSSLDGTVRCY--DLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
+S D T++ Y + + R + S F C +S EF + G D I +WSI
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLS--GSDNGSIALWSI 377
Score = 31.9 bits (69), Expect = 1.6
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLE-----EEFDAKDDIEKEKEYDSDRDAEQE 150
++SID D +++T ++++ ++ ++E EE +++E E +++ + +
Sbjct: 17 KSSIDHDPFL--EEETEKRRKFNYDDDDDIESVESEEEGKVGEEVEDEFAHETVGEKRKR 74
Query: 151 QNNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQYHKE------NKLLVTGF 204
+N E K+ +++ D R++ L Q K N L V
Sbjct: 75 LAEDTLNRIEEAKQREHEEDNEE--DDDFRDSLVAKTLMQEQLEKSGRVRRANALRVQDL 132
Query: 205 SSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVM 264
S F + + + +++S+ SVS G + + + G+ ++W S++ V+
Sbjct: 133 QSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSS-GKSDEYKWPSDE-VL 190
Query: 265 KQQG----------HSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
K G H+ LA S DG ++ TGG D V +W+
Sbjct: 191 KSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.5 bits (78), Expect = 0.13
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
+++ SVSP G +A + + L+ + S + + +GH A+ P+GL + TG
Sbjct: 251 VNNTSVSPDGKLLAVVGDST-ECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 290 FDGKVKVWNTTN-GFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
D ++W+ N F + + G+ + +F + V +D
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFD 361
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 35.1 bits (77), Expect = 0.17
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 251 QLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN 298
QL +W++ S + + GH+ + +A SP+G V + D +++WN
Sbjct: 367 QLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 414
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 259 SEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGF--DGKVKVWNTTNGFC 304
+ Q++ + + H+ + LA+ P + TGG DGK+K WNT G C
Sbjct: 287 TRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGAC 335
Score = 31.1 bits (67), Expect = 2.8
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 13/171 (7%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFC-------FVTFHEHKATVSGVT- 319
GH+ ++ L +S G + +GG V +W+ + F EH A V +
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 320 CSANKKFFVSSS--LDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDV 377
C + DG ++ ++ ++ + S V S + E ++ G
Sbjct: 307 CPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV-CSLLWSQRERELLSSHGFTQ 365
Query: 378 FEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
++ +W + L GH + V +A SP +ASA+ D +RLW+
Sbjct: 366 NQLTLWKYPSMSKMAELNGHTSRVLFMAQSP--NGCTVASAAGDENLRLWN 414
Score = 29.5 bits (63), Expect = 8.5
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 273 MTCLAYSPDGLHVVTGGFDGKVKVWN-TTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS 331
+T + ++ DGL + G + +V++W+ +N H++ V + + N +
Sbjct: 168 VTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSL--AWNNHILTTGG 225
Query: 332 LDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSGEFCAAGGQDVFEIFVW---SIKF 387
+DG + D+ R R+ T + C + SG+ A+GG + + +W S+
Sbjct: 226 MDGKIVNNDV-RIRSSIVGTYLGHTEEVCGLKWSESGKKLASGG-NYNVVHIWDHRSVAS 283
Query: 388 GK----LLEVLGGHEAPVSSLAFSPTLTSTRLASAS--WDGTVRLWD 428
K L H A V +LA+ P +T LA+ DG ++ W+
Sbjct: 284 SKPTRQWLHRFEEHTAAVRALAWCP-FQATLLATGGGVGDGKIKFWN 329
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 35.1 bits (77), Expect = 0.17
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 267 QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTF--HEHKATVSGVTCSANK 324
QGH+ ++ + + DG VVT G DG +K+W+ +G T+ H + G++ N
Sbjct: 110 QGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNG 168
Query: 325 KFFVSSSLDGTVRCYD 340
F S + V YD
Sbjct: 169 ALFGCGSENNRVFVYD 184
>At5g05150.1 68418.m00547 transport protein-related contains 2 WD-40
repeats (PF00400); similar to transport protein Gsa12p
(GI:18307769) [Pichia pastoris]
Length = 374
Score = 35.1 bits (77), Expect = 0.17
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 245 ACPNI--GQLLVWE--WQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGK-VKVWNT 299
ACP GQ+ V + W +++ + H + C+ + DG + T G ++++N
Sbjct: 178 ACPGFHPGQVQVHDLRWNVIKFI---KAHDSAIACMTLTLDGSLLATASTKGTLIRIFNA 234
Query: 300 TNGFCFVTFHE--HKATVSGVTCSANKKFFVSSSLDGTVRCYDL 341
+G F +A + V S+N K+ +SS GT+ + L
Sbjct: 235 VDGTLLQEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVFRL 278
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 35.1 bits (77), Expect = 0.17
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Query: 183 DRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEH----RISSISVSPP 238
D K + + H +L ++ GL + + + +TL + SS + P
Sbjct: 154 DLKKPIVNIACHPRLPVLYVAYAEGLIRAYNIHTYAVHYTLQLDNTIKLIGASSFAFHPT 213
Query: 239 GDWIAFACPNIGQLLVWEWQSEQYVMK--QQGHSLDMTCLAYSPDGLHVVTGGFDGKVKV 296
+WI F G LL W+ +E+ M Q S +T +++ P +VT DG ++V
Sbjct: 214 LEWI-FVGDRRGTLLAWDVSTERPNMIGITQVGSQPITSISWLPMLRVLVTVSKDGSLQV 272
Query: 297 WNT 299
W T
Sbjct: 273 WKT 275
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 35.1 bits (77), Expect = 0.17
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 272 DMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSS 331
++ ++ P V T D W+ +G +TF H + V ++ ++ S
Sbjct: 161 EINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGS 220
Query: 332 LDGTVRCYDLTRYRNFRTLTS---PSLVQFSCVALDSSGEFCAAG 373
DGT R +D + + + S S ++ S +ALD S + G
Sbjct: 221 EDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCG 265
Score = 34.7 bits (76), Expect = 0.23
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 357 QFSCVALD-SSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRL 415
+ + +++D SG A G + W ++ GK+ GH + ++ + ++++
Sbjct: 161 EINAMSVDPQSGSVFTAAGDSC--AYCWDVESGKIKMTFKGHSDYLHTVVSRSS--ASQI 216
Query: 416 ASASWDGTVRLWDC 429
+ S DGT R+WDC
Sbjct: 217 LTGSEDGTARIWDC 230
Score = 33.9 bits (74), Expect = 0.40
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 230 ISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGG 289
I+++SV P + F W+ +S + M +GHS + + ++TG
Sbjct: 162 INAMSVDPQSGSV-FTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGS 220
Query: 290 FDGKVKVWNTTNGFC 304
DG ++W+ G C
Sbjct: 221 EDGTARIWDCKTGKC 235
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.1 bits (77), Expect = 0.17
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 333 DGTVRCYDLTRYRNFRTLTSPSLVQFS--CVALDSSGEFCAAGGQDVFEIFVWSIKFGKL 390
DGT+R + ++ + TL + S S C+ SG+F + G V VW +
Sbjct: 174 DGTLRVF---KWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLGGPVCR--VWDVNASAA 228
Query: 391 LEVLGGHEAPV-SSLAFSPTLTSTRL----ASASWDGTVRLWDC-IDREVQCEPIRLNS- 443
+ L + + +S FS + A+ G++ D + + +PI+ NS
Sbjct: 229 VASLSKEKDEMFASCRFSVDSAGNEVLYIAANTERGGSIITCDTKLWKRKWSKPIKKNSI 288
Query: 444 DALQVAFRPDGEEIAVSTLDGNITFFEPSTCEQTGSVEGRSDLG 487
A V+ DG+ +A+ TL+G++ E ST QT V ++ LG
Sbjct: 289 SAFNVS--ADGKLLAIGTLEGDVLILE-STRMQTIQVVKKAHLG 329
Score = 31.1 bits (67), Expect = 2.8
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 233 ISVSPPGDWIAFACPNIGQLLVWE----------WQSEQYVMKQQGHSLDMTCLAYSPDG 282
++V P + A PN +L WE +SE+ V+K+ LA++P+G
Sbjct: 107 MAVHPREGGLICALPNSCKLFHWEDIMSREDNQAGESEE-VIKELRDVGQQLALAFNPEG 165
Query: 283 LHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTV-RCYDL 341
+ G DG ++V+ + + + ++V +T S + +F V SL G V R +D+
Sbjct: 166 SVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLV--SLGGPVCRVWDV 223
Query: 342 TRYRNFRTLTSPSLVQF-SC-VALDSSG 367
+L+ F SC ++DS+G
Sbjct: 224 NASAAVASLSKEKDEMFASCRFSVDSAG 251
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 225 ISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYV-MKQQGHSLDMTCLAYSPDGL 283
I ++ IS+ +VS G +A G +L+ E Q + + ++ H +T L +SPD
Sbjct: 283 IKKNSISAFNVSADGKLLAIGTLE-GDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSR 341
Query: 284 HVVTGGFDGKVKV 296
+V+ FD + ++
Sbjct: 342 GLVSVSFDSRARL 354
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 34.7 bits (76), Expect = 0.23
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
E + +E Q++ + K + EG EEE AK+D E+EKE + D E+E+ K
Sbjct: 63 EEGKNEEEANENQEEEAAKVESKAAEEGGNEEE--AKEDKEEEKEEAAREDKEEEEEAVK 120
Query: 156 VNSEENDK 163
+ + K
Sbjct: 121 PDESASQK 128
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 34.7 bits (76), Expect = 0.23
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
E+ E + +D+ R+KR R + E +E + + +K+K SD+D ++++ K
Sbjct: 115 ESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKK 174
Query: 156 VNSEENDKR 164
E K+
Sbjct: 175 KKKSEKVKK 183
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 34.7 bits (76), Expect = 0.23
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 311 HKATVSGVTCSANKK-FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQ-----FSCVALD 364
H+ G+ S+ K+ + +S S D + +D++ + L + + VA
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 365 SSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTV 424
E D ++ +W ++ ++ + HE ++ L+F+P LA+AS D TV
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNP-FNEWVLATASSDSTV 286
Query: 425 RLWDCIDREVQCEPI-RLNSDALQVAFRPDGEEIAVST 461
L+D + + + QV + P+ E + S+
Sbjct: 287 ALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASS 324
>At3g51880.2 68416.m05690 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 185
Score = 34.7 bits (76), Expect = 0.23
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 108 QDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQE 150
+D+ S + + L NE LE+E D+ E+E+E D D D E+E
Sbjct: 142 EDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDDDDDEEE 184
>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 379
Score = 34.7 bits (76), Expect = 0.23
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 98 SIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVN 157
+++AD+L ++ DD + + + E+E D +DD E+E D D D E+E + K +
Sbjct: 298 AVEADDLDIEDDDDE------IDEDDDEEDEEDDEDD---EEEDDEDDDEEEEADQGKKS 348
Query: 158 SEENDKRLMYKKLGRHYIGD 177
+++ +KK GR + +
Sbjct: 349 KKKSSAG--HKKAGRSQLAE 366
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 34.7 bits (76), Expect = 0.23
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVAL---DSSGEFCAAGGQDVFEIFVW 383
F S S DG+VR +DL + + S V L + A D ++ V
Sbjct: 192 FASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVL 251
Query: 384 SIKFGKLLEV-LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
I+F L V L H+A V+++A++P +S + +A D +WD
Sbjct: 252 DIRFPALPVVELQRHQASVNAIAWAPH-SSCHICTAGDDSQALIWD 296
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 34.3 bits (75), Expect = 0.30
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 361 VALDSSGEFCAAGGQDVFEIFVWSIKFGK-----LLEVLGGHEAPVSSLAFSPTLTSTRL 415
V+ ++SG A G+D +++W I+ + + VL GH V + + PT+ L
Sbjct: 98 VSWNASGSLLATCGRDK-SVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDV--L 154
Query: 416 ASASWDGTVRLWDCIDRE 433
S S+D T+++W C + E
Sbjct: 155 FSCSYDNTIKIW-CSEDE 171
Score = 33.9 bits (74), Expect = 0.40
Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 216 DVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQ-----YVMKQQGHS 270
D + L E + S+S + G +A C + +WE Q E+ + GHS
Sbjct: 81 DSESVSVLRGHESEVKSVSWNASGSLLA-TCGRDKSVWIWEIQPEEDDEFDTIAVLTGHS 139
Query: 271 LDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG----FCFVTFHE----HKATVSGVTCSA 322
D+ + + P + + +D +K+W + + C T E H +TV ++ +A
Sbjct: 140 EDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNA 199
Query: 323 NKKFFVSSSLDGTVRCY--DLTR---------YRNFRTLTSPSLVQFSCVALDSSGEFCA 371
V+ S D V+ + D++R + + TL+ V G +
Sbjct: 200 AGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSRDGVIAS 259
Query: 372 AGGQDVFEIFVWS-------IKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASW 420
G D ++FV S + L++ HE V+S+ ++P ++S ++W
Sbjct: 260 GAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDVSSFPFLRSNW 315
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 34.3 bits (75), Expect = 0.30
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEF----DAKDDIEKEKEYDSDRDAEQEQ 151
EA + +L + + R++R L+ NLEE + + K+D++++ + DR E E
Sbjct: 387 EAGMKTIKLRDEHEVLERQRRTDLEALRNLEENYQQLINRKNDLDEQIKRFKDRQGEIET 446
Query: 152 NNSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVKLTAVQ 192
++SK +E + + L ++ +A K ++ ++
Sbjct: 447 SSSKYKNETTSLKTELRALQEKHVNAREASAKLKTRIAELE 487
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 34.3 bits (75), Expect = 0.30
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSE 159
D DE + K++ +K + + N ++EF K E+ KE+ D D ++++ K ++
Sbjct: 156 DGDEKSKKKEKEKKKDKKKDGNNSE-DDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYND 214
Query: 160 ENDKRLMYKKLGRHYIGD 177
+++K+ KK +HY D
Sbjct: 215 DDEKK---KK--KHYNDD 227
Score = 33.1 bits (72), Expect = 0.69
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 100 DADELAVKQ---DDTSRKKRVRLQNEGNLE----EEFDAKDDIEKEKEYDSDRDAEQEQN 152
D DE K+ DD KK+ N+ + E +E+ +D +K+K YD+D D ++++
Sbjct: 214 DDDEKKKKKHYNDDDDEKKKKHNYNDDDDEKKKKKEYHDDEDKKKKKHYDNDDDEKKKKK 273
Query: 153 NSKVNSEENDKR 164
+ + + +E K+
Sbjct: 274 DHRDDDDEKKKK 285
Score = 32.3 bits (70), Expect = 1.2
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
Query: 108 QDDTSRKKRVRLQ-NEGNLEEEFDAK--------DDIEKEKE--YDSDRDAEQEQNNSKV 156
+DD +KK+ + Q E + ++++D K DD EK+K+ Y+ D D +++++N
Sbjct: 180 EDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDDDEKKKKHNYND 239
Query: 157 NSEENDKRLMY-----KKLGRHYIGD 177
+ +E K+ Y KK +HY D
Sbjct: 240 DDDEKKKKKEYHDDEDKKKKKHYDND 265
>At3g15600.1 68416.m01976 hypothetical protein low similarity to KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 591
Score = 34.3 bits (75), Expect = 0.30
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 91 QLCLWEASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQE 150
+L L EA+I + + ++ +D K + E LEE DA+ +I+KE D++ E
Sbjct: 368 RLKLLEAAIKSIQSGIRTEDACGSKEID-DKENELEEGSDAETEIDKEVA-QGDKEREVG 425
Query: 151 QNNSKVNSE----ENDKRLMYKKLG 171
+ ++++ E ++DK + ++G
Sbjct: 426 ETETEIDKEVVQCDSDKEVAESEIG 450
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 34.3 bits (75), Expect = 0.30
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 251 QLLVWEWQ-SEQYVMKQQGHSLDMTCLAYSPDGLH-VVTGGFDGKVKVWNTTNGFCFVTF 308
Q+L+W+W+ S+Q ++ H D+T + + P+ + +++ DG + ++NT +
Sbjct: 153 QVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPNKLLSASVDGLICLFNTEGD---IND 209
Query: 309 HEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSC-VALDSSG 367
+H +V V S K F+ DG + + LT + TL+ + SC V L+ +
Sbjct: 210 DDHLESVINVGTSIGKIGFLG---DGYKKLWCLT---HIETLSIWNWEDGSCEVNLEKAR 263
Query: 368 EFCA-AGGQDVFEIFV-WSIKFGKLLEVLGG 396
E + + QD + FV G+ L V+GG
Sbjct: 264 ELASDSWTQDNVDYFVDCHCPGGEDLWVIGG 294
Score = 33.9 bits (74), Expect = 0.40
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 294 VKVWNTTNGFCFVTFHEHKATVSGVTCS----ANKKFFVSSSLDGTVRCYDLTRYRNFRT 349
VK+++ G + H TV+ + S A+ S S DGT+R +D ++
Sbjct: 65 VKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSR 124
Query: 350 LTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVL-GGHEAPVSSLAFSP 408
+ + + + + + + AGG ++ +W + K + L H V+ + F P
Sbjct: 125 IDTGNDQEIFSFSYGGAADNLLAGGCKE-QVLLWDWRNSKQVACLEESHMDDVTQVHFVP 183
Query: 409 TLTSTRLASASWDGTVRLWD 428
+L SAS DG + L++
Sbjct: 184 N-KPNKLLSASVDGLICLFN 202
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 34.3 bits (75), Expect = 0.30
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
Query: 201 VTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSE 260
+ F SG+ L+ + N++ + + +S+ +SP G A G+L ++ +
Sbjct: 289 LVSFDSGVVLLNGL---NILSKIDLGFAVAASV-ISPDGKE-AIVGGQDGKLHIYSVSGD 343
Query: 261 QYVMKQ---QGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWN-TTNGFCFVTFHEHKATVS 316
+ ++ + H +T + YSPD +G + + VW+ T H A ++
Sbjct: 344 NNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARIN 403
Query: 317 GVTCSANKKFFVSSSLDGTVRCYDLTRYRNFR-TLTSPSLVQFSCVALDSSGEFCAAGGQ 375
+ S N K + S+D V Y++ + + R T + L + VA A+ G+
Sbjct: 404 SLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCT-VASSGE 462
Query: 376 DVFEIFVWSIK 386
D + +W I+
Sbjct: 463 DA-SVRLWHIE 472
Score = 33.9 bits (74), Expect = 0.40
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Query: 279 SPDGLHVVTGGFDGKVKVWNTTNGFCF---VTFHEHKATVSGVTCSANKKFFVSSSLDGT 335
SPDG + GG DGK+ +++ + +H+ ++ + S + F S +
Sbjct: 320 SPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANRE 379
Query: 336 VRCYDL-TRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI--KFGKLLE 392
+D T+ + + + + +A + + A G D + V+ + +
Sbjct: 380 AVVWDRETKQVKLNNMLFHT-ARINSLAWSPNNKMVATGSIDTC-VIVYEVDKPASSRIT 437
Query: 393 VLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
H V+++AF T +AS+ D +VRLW
Sbjct: 438 ARNAHLGGVNAVAFIDDCT---VASSGEDASVRLW 469
Score = 33.1 bits (72), Expect = 0.69
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFC---FVTFHEHKATVSGVTCSANKK 325
HS + C+ YSPDG +T D K +++ G + HK ++ V+ S + K
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 326 FFVSSSLDGTVRCYDL 341
++ S D + + +++
Sbjct: 110 RVLTVSADKSAKVWEV 125
Score = 32.3 bits (70), Expect = 1.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 196 ENKLLVTGFSSGLFFLHEMP-DVNLIHTLSISEHRISSISVSPPGDWIAFACPNIG-QLL 253
+ K + G G ++ + D NL + +HR + + D FA + + +
Sbjct: 322 DGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAV 381
Query: 254 VWEWQSEQYVMKQQ-GHSLDMTCLAYSPDGLHVVTGGFDGKVKVW 297
VW+ +++Q + H+ + LA+SP+ V TG D V V+
Sbjct: 382 VWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVY 426
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.9 bits (74), Expect = 0.40
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 110 DTSRKKRVRL---QNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLM 166
D++++K V + N+ N+E + D K ++E +K S E+ + N+K + E DK+L
Sbjct: 655 DSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSME--DKKLE 712
Query: 167 YKK 169
K+
Sbjct: 713 NKE 715
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 120 QNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
+ EGN EE D + K+K D + ++E NS + +E DK+
Sbjct: 921 KKEGNKEENKDTINTSSKQKGKDK-KKKKKESKNSNMKKKEEDKK 964
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEE-EFDAKDDIEKE-KEYDSDRDAEQEQNN 153
E + D + KQ +KK+ + N+++ E D K+ + E K+ + ++ + N
Sbjct: 927 EENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSEN 986
Query: 154 SKVNSEENDKR 164
SK+ E D +
Sbjct: 987 SKLKEENKDNK 997
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 33.9 bits (74), Expect = 0.40
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 327 FVSSSLDGTVRCYDLTRYRNFRTL------TSPSLVQFSCVALDSSGEFCAAGGQDVFEI 380
F S S DG+VR +DL R + T+ S LV+ S D + A +I
Sbjct: 192 FASVSEDGSVRVFDL-RDKEHSTIIYESGEPSTPLVRLSWNKQDP--RYMATVIMGSAKI 248
Query: 381 FVWSIKFGKLLEV-LGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWD 428
V I+F L V L H+A V+++A++P +S+ + SA D +WD
Sbjct: 249 VVLDIRFPALPVVELQRHQASVNAIAWAPH-SSSHICSAGDDSQALIWD 296
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.40
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEP---IRLNSDALQ 447
L L GH PV +A++ + LAS S+DG V LW ++ + S
Sbjct: 49 LATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNS 108
Query: 448 VAFRPD--GEEIAVSTLDGNITFF 469
+A+ P G +A + DGNI+ F
Sbjct: 109 IAWAPHDIGLSLACGSSDGNISVF 132
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 8/60 (13%)
Query: 285 VVTGGFDGKVKVWNTTNGF----CFVTFHEHKATVSGVTCSAN----KKFFVSSSLDGTV 336
+ +GG D VKVW NG CF +H V V + N K S S DG V
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 33.5 bits (73), Expect = 0.52
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 394 LGGHEAPVSSLAFSPTLTSTR-LASASWDGTVRLWDC 429
+GGH + VS +AFS R L S D TV++WDC
Sbjct: 244 VGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDC 280
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 33.5 bits (73), Expect = 0.52
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 394 LGGHEAPVSSLAFSPTLTSTR-LASASWDGTVRLWDC 429
+GGH + VS +AFS R L S D TV++WDC
Sbjct: 270 VGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDC 306
>At5g03710.1 68418.m00331 hypothetical protein
Length = 81
Score = 33.5 bits (73), Expect = 0.52
Identities = 13/70 (18%), Positives = 36/70 (51%)
Query: 95 WEASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNS 154
W + +E ++++ ++ + E EEE + +++ E+E+E + + + E+E+
Sbjct: 4 WGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63
Query: 155 KVNSEENDKR 164
+ E ++R
Sbjct: 64 EEEDREREER 73
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/72 (16%), Positives = 37/72 (51%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
E + +E ++++ ++ + E EEE + +++ E+E+E + + + E+E+ +
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 156 VNSEENDKRLMY 167
+ E ++ +
Sbjct: 66 EDREREERAFAF 77
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 33.5 bits (73), Expect = 0.52
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 274 TCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVT--CSANKKFFVSSS 331
TC+A H+ G G++K++ ++G + H+A V+ V S + + +SSS
Sbjct: 1433 TCIALLGGTNHIAVGSHAGEIKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSS 1492
Query: 332 LDGTVRCYDLTRYRN--FRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIK-FG 388
V+ +D + + +FS L + C A +DV V +
Sbjct: 1493 -SSDVQLWDASSITGGPRHSFDGCKAAKFSNSGLQFAALSCEASRKDVLLYDVQTCSPCQ 1551
Query: 389 KLLE-VLGGHEAPVSSLAFSPTLTSTRLASASWD 421
KL + V P S + FSP T WD
Sbjct: 1552 KLTDTVTSSRSNPYSLVHFSPCDTLILWNGVLWD 1585
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.5 bits (73), Expect = 0.52
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 302 GFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYD 340
G EH++ V+ + S++ FFVS+S D TV+ +D
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor
3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 33.5 bits (73), Expect = 0.52
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 99 IDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQ 149
+ +E A KQ++ R K+V + + NL++ F+ + E E E S R+ E+
Sbjct: 807 LQEEEEARKQEEAERLKKVEAERKANLDKAFEKQRQREIELEEKSRREREE 857
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 33.5 bits (73), Expect = 0.52
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 226 SEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHV 285
++ +IS++S SP G ++A A + +W+ ++G ++ L +SP G +
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLG-GISMLKWSPTGDYF 269
Query: 286 VTGGFDGKVKVWNT 299
FDG +W T
Sbjct: 270 FAARFDGTFCLWET 283
>At3g54710.1 68416.m06053 expressed protein
Length = 486
Score = 33.5 bits (73), Expect = 0.52
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 118 RLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGD 177
R N LEEE KDDI E + E++N + ++ +D L+ + R
Sbjct: 335 RSLNFDTLEEETIVKDDISNE--------SGDEKSNYEGDNASDDDSLLQSMIERPKTEP 386
Query: 178 AIRNADRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSP 237
N + V L +H N+ ++T L + +N+ + E + + P
Sbjct: 387 EKHNLPQLVNLIHRVFHSTNRTVIT--KEELLYKIIANQINITDRREVEEQLSLMLQLVP 444
Query: 238 PGDWIAFACPNIGQLLV 254
DWI+ + G LLV
Sbjct: 445 --DWISETKASSGDLLV 459
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 33.5 bits (73), Expect = 0.52
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 96 EASI-DADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNS 154
E SI D D K+ D +R + E E E D + EKE+E DRD +E+
Sbjct: 266 EGSIRDRDSEGSKRRDKDSDRRREREREKRREIESDRERRKEKERERSIDRDRRKEREGD 325
Query: 155 KVNSEENDK 163
+ N++
Sbjct: 326 YLRDRANER 334
>At2g30280.1 68415.m03686 expressed protein
Length = 346
Score = 33.5 bits (73), Expect = 0.52
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 65 SGHTDKIIGVFFE-RKSLDLITVSRNGQLCLWEASIDADELAVKQDDTSRKKRVRLQNEG 123
S HT++ + ++ + +D+ S Q L ++ +E D S E
Sbjct: 214 SSHTEEYVYDYYAVNEEMDISEDSSKNQFPL--VIVEDEEEFCDGSDESDYDSEDSNAED 271
Query: 124 NLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGD 177
+ + ++ +++ E+E++ D D D E E+ S+ + E +D+ K+ R +GD
Sbjct: 272 HPKTDYPEEEEEEEEEDDDDDDDDESEEEKSEASDESDDEETS-KRHVRSVLGD 324
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 33.1 bits (72), Expect = 0.69
Identities = 15/68 (22%), Positives = 37/68 (54%)
Query: 102 DELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEEN 161
++L +Q R++R + + + ++ D D+ KEK D + A++++ K + + N
Sbjct: 135 EKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNN 194
Query: 162 DKRLMYKK 169
D+ ++ +K
Sbjct: 195 DEDVVDEK 202
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 102 DELAVKQDDTSRKKRVRLQNEGNLEEEF-DAKDDIE--------KEKEYDSDRDAEQEQN 152
++L +Q RK+R + +++ N +E+ D K+ +E KEK+ + D D E+
Sbjct: 171 EKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKE 230
Query: 153 NSKVNSEENDKRLMYKKLGRHYIGDAIRNADRKVK 187
K+ E+ +K + + I + +RK K
Sbjct: 231 KEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSK 265
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 33.1 bits (72), Expect = 0.69
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 106 VKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRL 165
+K+ + +KK+ ++ E E K ++EK+K+ + + E E + K EE DKRL
Sbjct: 1558 LKKQEIEKKKKE--EDRKKKEAEMAWKQEMEKKKKEEERKRKEFEMADRKRQREEEDKRL 1615
Query: 166 MYKKLGRHYIGD---AIRNADRKVK 187
K R I D R AD K++
Sbjct: 1616 KEAK-KRQRIADFQRQQREADEKLQ 1639
Score = 31.9 bits (69), Expect = 1.6
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 83 LITVSRNGQLCLWEASIDADELAV-KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEY 141
LIT R+ ++ EA+ + +A K++D KK E+E K +IEK+K+
Sbjct: 1510 LITGKRDVKVKALEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKE 1569
Query: 142 DSDRDAEQE----QNNSKVNSEENDKRLMYKKLGR 172
+ + E E Q K EE KR ++ R
Sbjct: 1570 EDRKKKEAEMAWKQEMEKKKKEEERKRKEFEMADR 1604
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.1 bits (72), Expect = 0.69
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 254 VWEWQSEQYVMKQQGHSLDMTCLAYSP-DGLHVVTGGFDGKVKVWN 298
+W+ S+ +K HS +TC+ ++P D + ++G D KV++W+
Sbjct: 493 LWDLSSKT-CLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWS 537
Score = 30.7 bits (66), Expect = 3.7
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 322 ANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIF 381
+ + +SSS+D TVR +DL+ + + V +C+ + + G ++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYV--TCIQFNPVDDNYFISGSLDAKVR 534
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQ 435
+WSI ++++ HE V++ ++P + S+ GT L++ D ++Q
Sbjct: 535 IWSIPDHQVVDWNDLHEM-VTAACYTPDGQGALV--GSYKGTCCLYNTHDNKLQ 585
Score = 29.5 bits (63), Expect = 8.5
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 396 GHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQ-VAFRPDG 454
GH V L++S S L S+S D TVRLWD + C + +SD + + F P
Sbjct: 466 GHLDDVLDLSWSK---SQHLLSSSMDKTVRLWDLSSK--TCLKVFSHSDYVTCIQFNPVD 520
Query: 455 EEIAVS-TLDGNI 466
+ +S +LD +
Sbjct: 521 DNYFISGSLDAKV 533
>At5g51130.1 68418.m06340 expressed protein contains similarity to
unknown protein (pir||T26512)
Length = 318
Score = 33.1 bits (72), Expect = 0.69
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 110 DTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKK 169
D +KK + +N N E+ K +EK + +Q+ N + K
Sbjct: 4 DNDQKKNKKKRNRSNENEKSVEKVVANEEKVPTQQKQKQQQGQQGNCNQSKKKKNQEVYP 63
Query: 170 LG--RHYIGDAIRN---ADRKVKLTAVQYHKENKLLVTGFSSGLFFLH 212
G R+Y G I N D ++K+ ++ + L G +SG+ +H
Sbjct: 64 FGNYRNYYGYRISNDTDEDPRLKVLKKEWFEGKDCLDIGCNSGIMTIH 111
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 33.1 bits (72), Expect = 0.69
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEGNLEEEFD------AKDDIEKEKEYDSDRDAEQEQNN 153
D DE + ++K+ +++N GN EEE + +D E++K + AE+++
Sbjct: 91 DEDEEEISHGGEEKEKKSKVEN-GNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEE 149
Query: 154 SKVNSEENDKRLMYKKLG 171
+K +E D++ K G
Sbjct: 150 NKHEEDEIDEQDQSKNAG 167
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEY----DSDRDAEQEQ 151
E D +E + D+ + K+ E + EE +D+I+++ + D+D+D E +
Sbjct: 118 EVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLE 177
Query: 152 NNSKVNSEENDKR 164
+ END++
Sbjct: 178 EEKESGMSENDEK 190
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 33.1 bits (72), Expect = 0.69
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 100 DADELAVKQDDTSRKKRVRLQNEGNLEEEFD------AKDDIEKEKEYDSDRDAEQEQNN 153
D DE + ++K+ +++N GN EEE + +D E++K + AE+++
Sbjct: 91 DEDEEEISHGGEEKEKKSKVEN-GNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEE 149
Query: 154 SKVNSEENDKRLMYKKLG 171
+K +E D++ K G
Sbjct: 150 NKHEEDEIDEQDQSKNAG 167
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEY----DSDRDAEQEQ 151
E D +E + D+ + K+ E + EE +D+I+++ + D+D+D E +
Sbjct: 118 EVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDDETLE 177
Query: 152 NNSKVNSEENDKR 164
+ END++
Sbjct: 178 EEKESGMSENDEK 190
>At4g04635.1 68417.m00678 hypothetical protein
Length = 284
Score = 33.1 bits (72), Expect = 0.69
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 117 VRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAE---QEQNNSKVNSEENDKRLMYKKLGRH 173
V L E + EE+ D+ E+E+E + + E +E+ + EE ++ + YK +G
Sbjct: 205 VSLVEEDHHIEEYHVDDEEEEEEEEGEEEEGEGEEEEEEEEEGEEEEGEEHVAYKPIGDR 264
Query: 174 YIGDAIRN 181
+ +A+RN
Sbjct: 265 AM-EALRN 271
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 33.1 bits (72), Expect = 0.69
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 391 LEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSD----AL 446
L L GH PV +A++ + LAS S+DG + LW + Q + +D
Sbjct: 49 LATLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK-EGNQNQWTQAHVFTDHKVSVN 107
Query: 447 QVAFRPD--GEEIAVSTLDGNITFF 469
+A+ P G +A DGNI+ F
Sbjct: 108 SIAWAPHELGLSLACGASDGNISVF 132
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 285 VVTGGFDGKVKVWNTTNGF----CFVTFHEHKATVSGVTCSAN----KKFFVSSSLDGTV 336
+ +GG D VKVW +NG CF ++H V V + N K S S DG V
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 33.1 bits (72), Expect = 0.69
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
V G ++ V + T+G + HK VS V +A+ + S D TV +D+ R
Sbjct: 1019 VSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRM 1078
Query: 345 R 345
R
Sbjct: 1079 R 1079
Score = 32.3 bits (70), Expect = 1.2
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 268 GHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNGFCFVTFHEHK--ATVSGVTCSANKK 325
GH +TCL S D V++G DG V++T ++ +H + VS + S + +
Sbjct: 1109 GHDDIITCLYVSTDLDIVISGSKDGTC-VFHTLREGRYIRSLKHPSGSAVSKLAASHHGR 1167
Query: 326 FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSI 385
+ D ++ Y + +S S + +C+ L GEF + G D +I V S+
Sbjct: 1168 IVLYGDDDLSLHLYSI---NGKHLASSESNGRINCLELSKCGEFLVSAG-DQGQIIVRSM 1223
Query: 386 KFGKLLEVLGGHEAPVSSL 404
++++ G ++SL
Sbjct: 1224 NTLEVVKRYNGAGKIITSL 1242
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 382 VWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCI 430
V S+ G++++ + H+ VS +A T ST LA+ S+D TV +WD +
Sbjct: 1030 VISLTDGRVVQSIRHHKDVVSCVAV--TADSTILATGSYDTTVMVWDIL 1076
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 33.1 bits (72), Expect = 0.69
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 109 DDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQE 150
D + V ++EGN E+E D +D+ E++ + D + D EQE
Sbjct: 186 DADDGENEVEAEDEGNGEDEGDGEDEGEEDGDDDEEGDEEQE 227
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 97 ASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKV 156
A D E QD+T + ++G E E +A+D+ E E D + + E++ ++ +
Sbjct: 164 ADQDTSEEKDGQDETENGNELDDADDG--ENEVEAEDEGNGEDEGDGEDEGEEDGDDDEE 221
Query: 157 NSEENDKRLMY 167
EE + R Y
Sbjct: 222 GDEEQEGRKRY 232
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 32.7 bits (71), Expect = 0.92
Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 18/255 (7%)
Query: 183 DRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWI 242
D +++++ +HK + +VT L+++ + T++ ++ + + + +
Sbjct: 31 DYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTV 90
Query: 243 AFACPN--IGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT 300
++ N L + +Y+ +GH + L+ G ++G D V +W+
Sbjct: 91 IYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQR 150
Query: 301 NGFCFVTFHEHKATVSGVTCSA--NKKFFVSSSLDGTVRCYDLTRYRN--FRTLT-SPSL 355
C + V G +A ++ + + G +R +D Y F + L
Sbjct: 151 VEKC-----QGLLRVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDL 205
Query: 356 VQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE-APVSSL--AFSPTLTS 412
+ + V + G D F I V G LL A S+L AFSP
Sbjct: 206 SEANVVKFSNDGRLMLLTTMDGF-IHVLDSFRGTLLSTFSVKPVAGESTLDAAFSP--EG 262
Query: 413 TRLASASWDGTVRLW 427
+ S S DG+ W
Sbjct: 263 MFVVSGSGDGSTHAW 277
Score = 31.1 bits (67), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 277 AYSPDGLHVVTGGFDGKVKVWNTTNG 302
A+SP+G+ VV+G DG W +G
Sbjct: 257 AFSPEGMFVVSGSGDGSTHAWGVRSG 282
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 32.7 bits (71), Expect = 0.92
Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 18/255 (7%)
Query: 183 DRKVKLTAVQYHKENKLLVTGFSSGLFFLHEMPDVNLIHTLSISEHRISSISVSPPGDWI 242
D +++++ +HK + +VT L+++ + T++ ++ + + + +
Sbjct: 28 DYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTV 87
Query: 243 AFACPN--IGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTT 300
++ N L + +Y+ +GH + L+ G ++G D V +W+
Sbjct: 88 IYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQR 147
Query: 301 NGFCFVTFHEHKATVSGVTCSA--NKKFFVSSSLDGTVRCYDLTRYRN--FRTLT-SPSL 355
C + V G +A ++ + + G +R +D Y F + L
Sbjct: 148 VEKC-----QGLLRVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDL 202
Query: 356 VQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHE-APVSSL--AFSPTLTS 412
+ + V + G D F I V G LL A S+L AFSP
Sbjct: 203 SEANVVKFSNDGRLMLLTTMDGF-IHVLDSFRGTLLSTFSVKPVAGESTLDAAFSP--EG 259
Query: 413 TRLASASWDGTVRLW 427
+ S S DG+ W
Sbjct: 260 MFVVSGSGDGSTHAW 274
Score = 31.1 bits (67), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 277 AYSPDGLHVVTGGFDGKVKVWNTTNG 302
A+SP+G+ VV+G DG W +G
Sbjct: 254 AFSPEGMFVVSGSGDGSTHAWGVRSG 279
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 32.7 bits (71), Expect = 0.92
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 133 DDIEKEKEYDSDRDAEQEQNNSKVNSEENDK 163
DD E E E D D + E E+ N VN EE+++
Sbjct: 118 DDDEDEDEDDGDEEEEDEEENLTVNDEEDEE 148
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 32.7 bits (71), Expect = 0.92
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKD--DIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
K+ D R+K + + E+E D K D + EKE RD E+E++ S+ +E DK
Sbjct: 42 KEKDYDREKIRDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKE 101
Query: 165 LMYKKLGRH 173
K+ RH
Sbjct: 102 ---KERNRH 107
Score = 31.1 bits (67), Expect = 2.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 126 EEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDK 163
E E D D KEK+ + +R+ +++ N + N +E DK
Sbjct: 85 EREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDK 122
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDR----DAEQEQNNSKVNSEEND 162
++D + R R ++E + E+E D E+EK+ DR D E+E+N K E D
Sbjct: 57 RRDKEKERDRKRSRDE-DTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERD 115
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 32.7 bits (71), Expect = 0.92
Identities = 13/59 (22%), Positives = 35/59 (59%)
Query: 113 RKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLG 171
+++ V+L+ + EE+ D ++ ++E+E + +D +E + + + +E +++ KK G
Sbjct: 249 QQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTKKKKRG 307
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 108 QDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
++ +++ + NE + EEE + K D+ +E + + + + E+E+ K
Sbjct: 256 EEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTKK 303
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 32.7 bits (71), Expect = 0.92
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H VS V + + SSS D +VR +D+ ++ L + V +SS
Sbjct: 271 HTQCVSSVVWPEHDVIY-SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSA-LI 328
Query: 371 AAGGQDVFEIFVWSI-KFGKLLEVL--GGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
AAGG D + VW K G V H + +S+ + + + L SAS+DG + LW
Sbjct: 329 AAGGSDPI-LRVWDPRKPGTSAPVFQFSSHSSWISACKWHKS-SWFHLLSASYDGKIMLW 386
Query: 428 DCIDREVQCEPIRLNSDALQVAFRPDGEEIAVSTLDGNI 466
D + I ++D + A GE + D N+
Sbjct: 387 D-LRTAWPLSVIDTHNDKVLSADWWKGESVVSGGADSNL 424
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 392 EVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNS-DALQVAF 450
++L GH+A V S+ S + + S+SWD T+ LW+ + + E + + A
Sbjct: 199 KILRGHKASVQSV--SAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAE 256
Query: 451 RPDGEEIAVSTLDGN 465
E AV++L G+
Sbjct: 257 ESQSEGEAVTSLVGH 271
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 32.7 bits (71), Expect = 0.92
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 126 EEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKL 170
+++ D DD + + + D D D + E +S+V EE D L +K+
Sbjct: 120 DDDDDDDDDDDDDDDDDDDDDDDDESKDSEVEEEEGDDDLRMRKI 164
>At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)
identical to cDNA DEAD box RNA helicase, RH28 GI:3776026
Length = 789
Score = 32.7 bits (71), Expect = 0.92
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 96 EASIDADELAVKQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSK 155
+AS D EL Q+D+S + EG EE +A +D + E+EY+ + D E+E++ +
Sbjct: 9 DASDDELELIRNQEDSSEED----VKEGEAEEH-EAGEDEDGEEEYEEEDDDEEEEDEKR 63
Score = 30.3 bits (65), Expect = 4.9
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 109 DDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKR 164
+D S + ++N+ + EE D K+ +E E D D E+E + EE D++
Sbjct: 8 EDASDDELELIRNQEDSSEE-DVKEGEAEEHEAGEDEDGEEEYEEEDDDEEEEDEK 62
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 32.7 bits (71), Expect = 0.92
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 365 SSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTV 424
S+G+ G + ++++ + G + VL H +PV + P + L S+SWDG +
Sbjct: 410 STGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPT--LISSSWDGDL 467
Query: 425 RLWD 428
W+
Sbjct: 468 VKWE 471
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 32.7 bits (71), Expect = 0.92
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 417 SASWDGTVRLWDCIDREVQC-EPIRLNSDALQVAFRPDGEEIAVSTLDGNITFFEPSTCE 475
S SWD T+++W D ++C E I+ + DA+ DG + S DG + + E
Sbjct: 189 SGSWDKTLKVWRLSD--LKCLESIKAHDDAINGLVAGDGRVYSASA-DGKVKIWGK---E 242
Query: 476 QTGSVEGRSDLGSGRAETDLVTPQTLLKTKAFTTICYSADGTCILGGGNSKNVCLYSVKD 535
+ +E S S T + + + ++ S DG + GGG+ V + K+
Sbjct: 243 KRKQIESTSS-SSSSLHVLKATLEGRAEV-SVNSVVVSGDGNWVYGGGSDGFVIGWEKKE 300
Score = 32.3 bits (70), Expect = 1.2
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 21/224 (9%)
Query: 225 ISEHRISSISVSPPGDWIAFACPNIGQLLVWEWQSEQYVMKQQGHSLDMTCLAYSPDGLH 284
+S H S S++ G+++ A ++VW+ Q + + + G D + A G
Sbjct: 57 LSAHVGSVSSLALCGEFLLSASQG-KDIIVWQ-QPDLKIFAKFGQG-DGSVKALVSVGSK 113
Query: 285 VVTGGFDGKVKVWNTTNGFCFVTFHEHKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRY 344
V T D +++VW + F T KF S+ Y TR
Sbjct: 114 VFTAHQDSRIRVWKVSRRNSENAFR--LVDTLPTTKDYLGKFMKQSN-------YVQTR- 163
Query: 345 RNFRTLTSPSLVQFSCVALDSSGEFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSL 404
RN + L SC+A+ + +G D + VW + K LE + H+ ++ L
Sbjct: 164 RNHKRLWIEHADSISCLAVHAG--IIYSGSWDK-TLKVWRLSDLKCLESIKAHDDAINGL 220
Query: 405 AFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNSDALQV 448
R+ SAS DG V++W ++ Q E +S +L V
Sbjct: 221 VAG----DGRVYSASADGKVKIWG-KEKRKQIESTSSSSSSLHV 259
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.7 bits (71), Expect = 0.92
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 318 VTCSANKK--FFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFCAAGGQ 375
V C A K +V S+ G V +++ ++ T P A G +
Sbjct: 834 VPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGME 893
Query: 376 DVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
D I +++++ ++ L GH+ ++ LAFS L L S+ D + W
Sbjct: 894 DS-SIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNI--LVSSGADAQLFFW 942
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 368 EFCAAGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
+ C D I VW + GK L GHEAPV S+ + S + DG ++ W
Sbjct: 467 QMCVVTCGDDKLIKVWDLS-GKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAW 525
Score = 30.7 bits (66), Expect = 3.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 36 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 95
+ ++A+G +D++ I+ V E T L GH I G+ F L++ + QL W
Sbjct: 885 NNIIAIGMEDSSIHIYNVRVDEVKT--KLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
Query: 96 EA 97
A
Sbjct: 943 TA 944
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 32.7 bits (71), Expect = 0.92
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQE----QNNSKVNSEEND 162
K S K++++L+ E ++ E D KD E+E + + D D E E N+K + E
Sbjct: 10 KSQIESIKEQLKLEKEDDVVVE-DVKDG-EEEDDDEDDEDVEVEGEGGNENAKQSRSEKK 67
Query: 163 KRLMYKKLGRHYIGDAIRNADRKVK 187
R KLG + D R ++ K
Sbjct: 68 SRKAVLKLGMKPVSDVSRVTIKRAK 92
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 32.3 bits (70), Expect = 1.2
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 311 HKATVSGVTCSANKKFFVSSSLDGTVRCYDLTRYRNFRTLTSPSLVQFSCVALDSSGEFC 370
H VS V + + SSS D +VR +D+ ++ L + V +SS
Sbjct: 271 HTQCVSSVVWPEHDVIY-SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSA-LI 328
Query: 371 AAGGQDVFEIFVWSI-KFGKLLEVL--GGHEAPVSSLAFSPTLTSTRLASASWDGTVRLW 427
AAGG D + VW K G V H + +S+ + + + L SAS+DG + LW
Sbjct: 329 AAGGSDPI-LRVWDPRKPGTSAPVFQFSSHSSWISACKWHKS-SWFHLLSASYDGKIMLW 386
Query: 428 D 428
D
Sbjct: 387 D 387
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 392 EVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCIDREVQCEPIRLNS-DALQVAF 450
++L GH+A V S+ S + + S+SWD T+ LW+ + + E + + A
Sbjct: 199 KILRGHKASVQSV--SAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAE 256
Query: 451 RPDGEEIAVSTLDGN 465
E AV++L G+
Sbjct: 257 ESQSEGEAVTSLVGH 271
>At5g12230.1 68418.m01435 expressed protein
Length = 221
Score = 32.3 bits (70), Expect = 1.2
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 130 DAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDK---RLMYK-KLGRHYIGD-AIRNADR 184
D K K+++ D DR+ ++ ++ K S++ DK R K K G H GD + ++ D+
Sbjct: 126 DRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKHHDK 185
Query: 185 KVK------LTAVQYHKENK 198
K K L VQ HK+NK
Sbjct: 186 KRKHDGDEDLNDVQRHKKNK 205
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 32.3 bits (70), Expect = 1.2
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 126 EEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLG 171
E D D+ E+E+E + + + E+E+ N + E + RL Y+++G
Sbjct: 7 ENGVDGDDEREEEEEDEEEEEEEEEEENG--DEAEEEPRLKYQRMG 50
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 31.9 bits (69), Expect = 1.6
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 126 EEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKKLGRHYIGD 177
E++ D +D E E++ D D + + E +V+ + +++KK GR + D
Sbjct: 311 EDDIDEDED-EDEEDEDEDEEEDDEDEEEEVSKTKKKPSVLHKKGGRPQVTD 361
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 127 EEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEENDKRLMYKK 169
EEF+ +D E + + D D D E E + + + E+ ++ + K
Sbjct: 302 EEFEIDNDDEDDIDEDEDEDEEDEDEDEEEDDEDEEEEVSKTK 344
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 99 IDADELAVKQ-DDTSRKKRVRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVN 157
+D + V+ ++T+++K ++ EG E + K+ EK KE D E+E+
Sbjct: 318 VDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEK-EKVKEDDQKEKVEEEEKEKVKG 376
Query: 158 SEENDK 163
EE +K
Sbjct: 377 DEEKEK 382
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 31.9 bits (69), Expect = 1.6
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 84 ITVSRNGQLCLWEASIDADELAVKQDDTSRKKR-VRLQNEGNLEEEFDAKDDIEKEKEYD 142
+T + N +L + + V D T ++K ++ G+ +E+ D K EK+KE+D
Sbjct: 22 VTFADNVELKSKDLESSKKDKKVDHDSTHKEKGGEKVDGAGSDDEDNDKK---EKKKEHD 78
Query: 143 SDRDAEQEQNNSKVNSEENDKRLMYKKLGRH 173
+ +Q +N K ++ K + KK G H
Sbjct: 79 VQKKDKQHENKDK---DDEKKHVDKKKSGGH 106
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 380 IFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLA-----SASWDGTVRLWD 428
+ V+S G + L GH APV++L P + + +AS DGT+R WD
Sbjct: 30 VSVFSAATGLQITSLEGHTAPVTTLIVVPASSPAQKILCYCWTASLDGTIRHWD 83
Score = 31.5 bits (68), Expect = 2.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 269 HSLDMTCLAYSPDGLHVVTGGFDGKVKVWNTTNG 302
HS ++ L +S DG ++ +GG +G + VW G
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTG 315
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 31.9 bits (69), Expect = 1.6
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 372 AGGQDVFEIFVWSIKFGKLLEVLGGHEAPVSSLAFSPTLTSTRLASASWDGTVRLWDCID 431
+ G+D + +W + ++ + HE V+ L+F+P LA+AS D TV L+D
Sbjct: 235 SAGEDG-RLVIWDTRTNQMQHQVKVHEREVNYLSFNP-FNEWVLATASSDSTVALFDLRK 292
Query: 432 REVQCEPIRLN-SDALQVAFRPDGEEIAVST 461
+ + + QV + P+ E + S+
Sbjct: 293 LNAPLHVMSSHEGEVFQVEWDPNHETVLASS 323
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 31.9 bits (69), Expect = 1.6
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 KQDDTSRKKRVRLQNEGNLEEEFDAKD-DIEKEKEYDSDRDAEQEQNNSKVNSEENDKRL 165
K D S + L+ E E+ A+D + E+E+E + DR+ E+++ + + + ++
Sbjct: 343 KGDRASYLREFDLREEERRREDQRARDKEREREREREHDRERERQRERERQRARDRERER 402
Query: 166 MYKKLGRHYIGDAIRNADRKVKL 188
+ ++ + G+ R R +++
Sbjct: 403 ILERREKERQGERERERKRALEI 425
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 117 VRLQNEGNLEEEFDAKDDIEKEKEYDSDRDAEQEQNNSKVNSEEND 162
V ++ E EE+ D DD E++ E D + D E++ EE D
Sbjct: 1148 VNMEVENQDEEDDDGDDDPEEDPEEDPEEDPEEDPEEDPEECEEMD 1193
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,361,341
Number of Sequences: 28952
Number of extensions: 822600
Number of successful extensions: 6416
Number of sequences better than 10.0: 346
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 4045
Number of HSP's gapped (non-prelim): 1822
length of query: 746
length of database: 12,070,560
effective HSP length: 86
effective length of query: 660
effective length of database: 9,580,688
effective search space: 6323254080
effective search space used: 6323254080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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