Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000838-TA|BGIBMGA000838-PA|IPR001766|Fork head
transcription factor
(218 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 80 1e-15
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 79 3e-15
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 78 7e-15
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 73 1e-13
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 70 2e-12
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 69 3e-12
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 64 7e-11
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 64 7e-11
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 60 1e-09
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 55 4e-08
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 53 2e-07
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 49 3e-06
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 31 0.74
SB_34524| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_47633| Best HMM Match : Ank (HMM E-Value=1.7e-28) 29 3.0
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.0
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 4.0
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_4349| Best HMM Match : efhand (HMM E-Value=0.00066) 28 5.2
SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88) 28 5.2
SB_39545| Best HMM Match : TolA (HMM E-Value=0.12) 28 6.9
SB_58526| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 27 9.1
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 80.2 bits (189), Expect = 1e-15
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 47 DDEPVVKEAKVDVESPAVRKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKAN 104
D V+ E + KPPY+Y LI A+ + E +T+S IYQWI D FP+YK
Sbjct: 54 DPSAVLDETEARQHQTKESKPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFPYYKEA 113
Query: 105 DERWKNSVRHNLSINPHFRKGARAPQ--GAGHLWSLAAN 141
WKNS+RHNLS+N F K R+ G G W++ N
Sbjct: 114 GNGWKNSIRHNLSLNKCFIKVPRSKDDPGKGSYWAIDQN 152
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 79.8 bits (188), Expect = 2e-15
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 54 EAKVDVESPAVRKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNS 111
E K + P V KPPY+Y LI A+RE+ E LT++GIYQ+I +FP+Y+ N + W+NS
Sbjct: 33 EGKDTSKDPNV-KPPYSYVALIAMAIRESPEKRLTLNGIYQYIISKFPYYEKNKKGWQNS 91
Query: 112 VRHNLSINPHFRKGARAPQG--AGHLWSLAANAIDLLPLRN 150
+RHNLS+N F K R G G+ W+L D+ N
Sbjct: 92 IRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGN 132
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 49 EPVVKEAKVDVESPAVRKPPYTYPELIERALRENG--ELTVSGIYQWISDRFPFYKANDE 106
E + KE +D ++ KPPY+Y LI A+R+ ++T+S IY+WI + F FY+ D
Sbjct: 81 ESISKEPNIDYKNDPNHKPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADP 140
Query: 107 RWKNSVRHNLSINPHFRKGARAPQ--GAGHLWSL 138
W+NS+RHNLS+N F K R G G W +
Sbjct: 141 TWQNSIRHNLSLNKCFVKVPRKKDEPGKGGFWRI 174
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 66 KPPYTYPELIERALRE--NGELTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPPY+Y LI A+++ N LT+S IYQ+I D FP+Y+ N +RW+NS+RH+LS N F
Sbjct: 39 KPPYSYISLITMAIQQSPNKMLTLSEIYQFIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 98
Query: 124 KGARAPQ--GAGHLWSL 138
K R+P G G W+L
Sbjct: 99 KVPRSPDRPGKGSYWTL 115
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 77.8 bits (183), Expect = 7e-15
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 51 VVKEAKVDVESPAVRKPPYTYPELIERALRENG--ELTVSGIYQWISDRFPFYKANDERW 108
V KE VD ++ KP ++Y LI A+ N ++ + IYQ+ISD FP+Y+ D+ W
Sbjct: 69 VKKETIVDDDADV--KPAHSYIALIAMAILSNSSKKMILGDIYQYISDNFPYYRNKDKSW 126
Query: 109 KNSVRHNLSINPHFRKGARAPQGAGHLWSL 138
+NS+RHNLS+N F K R+ G G+ W++
Sbjct: 127 RNSIRHNLSLNECFIKAGRSENGKGNYWAI 156
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 66 KPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPPY+Y LI A++ E +T+SGIY +I DRFP+Y+ N + W+NS+RHNLS+N F
Sbjct: 58 KPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQNSIRHNLSLNECFV 117
Query: 124 KGARAPQ--GAGHLWSLAANAIDL 145
K R + G G W L +++++
Sbjct: 118 KVPRDDKKPGKGSFWMLDPDSLNM 141
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 66 KPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPPY+Y LI A+ + + LT+S IY +IS RFPFY+ +WKNS+RHNL++N F
Sbjct: 43 KPPYSYIALICMAITSSPQRQLTLSEIYDFISQRFPFYQTCSIKWKNSIRHNLTLNDCFI 102
Query: 124 KGARAPQ--GAGHLWSLAANAIDL 145
K R P G G+ W++ ++D+
Sbjct: 103 KLPREPNRPGKGNYWTIDPTSVDM 126
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 66 KPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KP +Y LI A+ + E L +S IY +I R+P+++ W+NS+RHNLS+N F
Sbjct: 80 KPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGWRNSIRHNLSLNECFV 139
Query: 124 KGARAPQGAGHLWSLAANAID 144
K R+P G GH W++ A D
Sbjct: 140 KAGRSPNGKGHFWAIDATYFD 160
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 66 KPPYTYPELIERALRE--NGELTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPPY+Y +LI +A+ + +LT+SGIY I+ +P+Y+ D+ W+NS+RHNLS+N +F
Sbjct: 116 KPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYYRTADKGWQNSIRHNLSLNRYFV 175
Query: 124 KGARAPQ--GAGHLWSL 138
K RA G G W +
Sbjct: 176 KVPRAQDEPGKGSFWRI 192
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 61 SPAVRKPPYTYPELIERALRENG--ELTVSGIYQWISDRFPFYKANDER-WKNSVRHNLS 117
+PA +KPPY+Y LI A++++ ++T++GIY +I+ FP+Y ++R W+NS+RHNLS
Sbjct: 56 TPAPQKPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQNSIRHNLS 115
Query: 118 INPHFRKGAR--APQGAGHLWSL 138
+N F K R A G G W+L
Sbjct: 116 LNRCFVKVHREKADPGKGCYWTL 138
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 60 ESPAVRKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLS 117
+ A+ KPPY+Y LI A+ ++ + LT+S I ++I RFP+Y+ W+NS+RHNLS
Sbjct: 58 QGTALSKPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPSWQNSIRHNLS 117
Query: 118 INPHFRKGARAP--QGAGHLWSL 138
+N F K R P G G+ W+L
Sbjct: 118 LNDCFVKMPREPGNPGKGNYWTL 140
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 66 KPPYTYPELIERALRE--NGELTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPPY++ LI A+ E N L V IY WI D FP+++ WKNSVRHNLS+N F+
Sbjct: 122 KPPYSFSSLIFMAIEESPNKRLPVKDIYNWIMDHFPYFRDARLGWKNSVRHNLSLNKCFK 181
Query: 124 KGAR---APQGAGHLWSLAANAID--LLPLRNTP 152
K + G G LW++ + L LR TP
Sbjct: 182 KVDKDKGQNVGKGSLWTVDPDFRPNLLQALRKTP 215
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 66 KPPYTYPELIERALRENGEL--TVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPP++Y LI ++ + T++ IY++I RFP+++ N ++W+NS+RHNLS+N F
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 124 KGARA---PQGAGHLWSLAANAIDL 145
K R+ G G+ W+L + D+
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDM 176
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 66 KPPYTYPELIERALRENGEL--TVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPP++Y LI ++ + T++ IY++I RFP+++ N ++W+NS+RHNLS+N F
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 124 KGARA---PQGAGHLWSLAANAIDL 145
K R+ G G+ W+L + D+
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDM 176
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 66 KPPYTYPELIERALRE--NGELTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KP +Y LI +A+ +L +S IY +I +P+++ W+NS+RHNLS+N F
Sbjct: 99 KPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSIRHNLSLNECFV 158
Query: 124 KGARAPQGAGHLWSL 138
K R+ G GH W++
Sbjct: 159 KVGRSSNGKGHFWAI 173
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 65 RKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHF 122
R+PPY+Y LI A++ + E LT+ GI ++I DRFPFY+ WK +R+NLS+N F
Sbjct: 108 RRPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICIRNNLSLNDCF 167
Query: 123 RK-GARAPQG-AGHLWSL 138
K G ++ + G+ W+L
Sbjct: 168 IKTGIKSDEPLKGNYWTL 185
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 65 RKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHF 122
RKP +Y LI A+ E+ E LT+S IY I +FP++ A WKN+VRHNLS++ F
Sbjct: 18 RKPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRMGWKNTVRHNLSLHECF 77
Query: 123 RKGARAPQGAGHLW 136
KG + G W
Sbjct: 78 VKGELSSNGKSCYW 91
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 46 PDDEPVVKEAKVDVESPAVRKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKA 103
PD + + D A +PP+TY LI +A+ ++ + LT++ IY W + F +++
Sbjct: 388 PDGISLDIQRSADFYQKADVRPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYFRR 447
Query: 104 NDERWKNSVRHNLSINPHF 122
N WKN+VRHNLS++ F
Sbjct: 448 NAATWKNAVRHNLSLHKCF 466
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 85 LTVSGIYQWISDRFP-FYKANDERWKNSVRHNLSINPHFRKGARAPQGAGHLWSL 138
+T+S IY +I+ +P F K W+NSVRHNLS N F K +RA G GH W +
Sbjct: 146 MTLSSIYSFIAKNYPHFDKEKGPGWRNSVRHNLSSNDCFVKASRAENGKGHYWMI 200
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 85 LTVSGIYQWISDRFP-FYKANDERWKNSVRHNLSINPHFRKGARAPQGAGHLWSL 138
+T+S IY +I+ +P F K W+NSVRHNLS N F K +RA G GH W +
Sbjct: 1 MTLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASRAENGKGHYWMI 55
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 96 DRFPFYKANDERWKNSVRHNLSINPHFRKGARAPQ--GAGHLWSL 138
D FPFY+ N +RW+NS+RHNLS N F K R P G G LW+L
Sbjct: 2 DHFPFYRDNTQRWQNSLRHNLSFNDCFVKIPRRPDQPGKGSLWAL 46
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 66 KPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDERWKNSVRHNLSINPHFR 123
KPP++Y LI A+ + E LT++ I +++ + F++ + + WKNSVRHNLS N F
Sbjct: 133 KPPHSYIALIATAILNSPEKRLTLTEINEYLVKHYVFFRGSYQGWKNSVRHNLSFNKCFV 192
Query: 124 KGARAP 129
K R P
Sbjct: 193 KILRDP 198
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 69 YTYPELIERALRENGE--LTVSGIYQWISDRFPFYKANDER-----WKNSVRHNLSINPH 121
Y+Y +LI +A++ + E LT+S IY W+ + P+++ + WKNS+RHNLS++
Sbjct: 67 YSYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKGDSNSSAGWKNSIRHNLSLHSK 126
Query: 122 F 122
F
Sbjct: 127 F 127
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 23 DNDCASLAWLLNFRLDEVVNVRVPDDEPVVKEAKVDV--ESP-AVRKPPYTYPELIERAL 79
D ++ WL E++ + E V V+ SP +PPY+Y LI A+
Sbjct: 14 DESLTNIQWLCELESSELLLAKKGSRETEVTAPPVNAPPHSPNPYTRPPYSYATLILLAI 73
Query: 80 RENGE--LTVSGIYQWISDRFPFYKANDERWK 109
E +T+ IY+WI +RFP+Y + WK
Sbjct: 74 NSTEEKRMTLQEIYKWIEERFPYYTKCKKAWK 105
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 58 DVESPAVRKPPY---TYPELIERALRENG--ELTVSGIYQWISDRFPFYKAND-----ER 107
D ++ +K P+ +Y +LI RA+ ++ +LT+ IY W P++KA + +
Sbjct: 735 DDDATGEKKNPWGNASYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPSTKG 794
Query: 108 WKNSVRHNLSINPHF 122
WKN++RH LS+ F
Sbjct: 795 WKNAIRHTLSLRQRF 809
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 53 KEAKVDVESPA-VRKPPYTYPELIERALRENGE--LTVSGIYQWISDRFPFYKAND--ER 107
K +++ + P K +Y +L+ A+ + + LT+ IY W D +
Sbjct: 433 KAFRIESKPPTNYSKGTVSYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHD 492
Query: 108 WKNSVRHNLSINPHFRKGARAPQGAGHLWSL 138
WKN++RH LS F + A + + W++
Sbjct: 493 WKNTIRHTLSRRKRFLRIAMSEKKNKSWWTV 523
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 110 NSVRHNLSINPHFRKGARAPQGA----GHLWSL 138
NSVRHNLS+N F K R PQGA G LWSL
Sbjct: 299 NSVRHNLSLNKAFCKLER-PQGASQRKGCLWSL 330
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 53 KEAKVDVESPAVRKPPYTYPELIERALR--ENGELTVSGIYQWI 94
KE E KP ++Y LI A+R E LT+SGIY++I
Sbjct: 48 KEKAGKDEQKNTEKPAFSYNALIMMAIRGSEEKRLTLSGIYEYI 91
>SB_34524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 158 AAEPLHTAKIIGFPKVIVLDEAAIAAASIIPDQDLFSGSTMFLNPV 203
+ EP+ +I GFPK ++ D ++ ++I QD F GS M LN V
Sbjct: 49 STEPVVEVQINGFPKQVLNDPGSV--INLI-GQDEFQGSQMMLNTV 91
>SB_47633| Best HMM Match : Ank (HMM E-Value=1.7e-28)
Length = 353
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 102 KANDERWKNSVRHNLSINPHFRKGARAPQGAGHLWSLAANAIDLLPLRNTPMPEEKAAEP 161
K N E ++ + +N + G A W + + N P+ P
Sbjct: 152 KVNFEYLQSLLDKGADVNTRDKHGQTILHEAARSWGVDTARFLIQKGANINAPDVYGRCP 211
Query: 162 LHTAKIIGFPKVI--VLDEAA-IAAASIIPDQ 190
LH+A I +P+++ +LD A + AA++ DQ
Sbjct: 212 LHSACIADYPEMVQYLLDSGADVNAATVTEDQ 243
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 128 APQGAGHLWSLAANAIDLLPLRNTPMPEEKAAEPLHTAKI 167
AP+G + SL N +D LPL+ P+ +E + + K+
Sbjct: 85 APEGGEYDKSLPVNGVDSLPLKTHPVDDELPVDQILDDKL 124
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 113 RHNLSINPHFRKGARAPQGAGHLWSLAANAIDLLPLR---NTPMPEEKAAEP 161
R ++++PHF GA H SL +P R +TP+P+ + +P
Sbjct: 233 RPTIAVDPHFTNDKEPSMGAAHT-SLQVRGDGKMPRRSEHSTPLPQPQPQQP 283
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 39 EVVNVRVPDDEPVVKEAKVDVESPAVRKPPYTYP 72
EV + P PVV EA V P V P T P
Sbjct: 58 EVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVP 91
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 48 DEPVVKEAKVDVESPAVRKPPYTY-PELIERALRENGELTVSGIYQWISDRFPFYKANDE 106
+E K + V + R P T+ ++ + +NGE+ +S +++ D++ + KA DE
Sbjct: 378 EEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEKA-DE 436
Query: 107 RWK 109
RW+
Sbjct: 437 RWR 439
>SB_4349| Best HMM Match : efhand (HMM E-Value=0.00066)
Length = 188
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 81 ENGELTVSGIYQWISDRFPFYKANDERWK 109
+NG L +S +W +D P +A D +WK
Sbjct: 26 KNGCLDLSEFMRWANDLEPMCQATDAKWK 54
>SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88)
Length = 48
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 70 TYPELIERALRENGE--LTVSGIYQWISD 96
TY EL+ +A+ + E LT+ GIY+W +
Sbjct: 4 TYSELLAKAISSSPEQRLTLQGIYRWFEE 32
>SB_39545| Best HMM Match : TolA (HMM E-Value=0.12)
Length = 1189
Score = 27.9 bits (59), Expect = 6.9
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 47 DDEPVVKEAKVDVESPAVRKPPYTYPELIERALRENGELTVSGIYQWISDRFPFYKANDE 106
DDE V+E +VDVE P R P E I ++E E + I W+ D K +
Sbjct: 223 DDE--VEEEQVDVEKPLERDAPQPIHEEICAEIKETQESGIELI--WMDDEQE--KPRNT 276
Query: 107 RWKNSVRHNLSINPHFRKGARAPQGAGHLWSLAANAIDLL 146
+N + H+ + F + + L S +I++L
Sbjct: 277 PDENQIDHDKVLEGMFENEISKNKASRPLASEEERSIEVL 316
>SB_58526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 3 TKTPESEKWRRRKLSKNIDNDNDCASLAWLLNFRLDEVVNVRVPDDEPVVKEAKVDVESP 62
T+T E E+W L+K +D + S + DE++ + + + K +V
Sbjct: 110 TETIEKERWSH--LAKKVDKEQTPGSRSNSFRITADELIARKFTPKSSLNRRQKSEVFLS 167
Query: 63 AVRKPPYTYPELIERALRENGE 84
AV+K T P+ + + +EN E
Sbjct: 168 AVQKFEGTVPDKLLK--KENME 187
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 56 KVDVES--PAVRKPPYTYPELIERALRENG-ELTVSGIYQWISDRFPFYKANDERWKNSV 112
K++ ES P K P EL A+ G EL S D + +AN ERW+N
Sbjct: 1422 KMNTESGLPQAWKEPVPLQELHNLAVTNLGRELDTSN-----PDDAMYIQANVERWRNKQ 1476
Query: 113 RHNLSINPHFRKGARAPQ 130
R + R+ RA +
Sbjct: 1477 RQREKLRQEMREKERAKE 1494
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,989,856
Number of Sequences: 59808
Number of extensions: 335278
Number of successful extensions: 648
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 602
Number of HSP's gapped (non-prelim): 43
length of query: 218
length of database: 16,821,457
effective HSP length: 79
effective length of query: 139
effective length of database: 12,096,625
effective search space: 1681430875
effective search space used: 1681430875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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