GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000836-TA|BGIBMGA000836-PA|undefined
         (386 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.5  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    25   3.5  
AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidas...    25   4.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   6.2  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 14/49 (28%), Positives = 18/49 (36%)

Query: 303 GLSSPLGALSPWGSSPDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRG 351
           G S P G L P G   D      +G P  D  P  + +     P   +G
Sbjct: 582 GPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQGQRGLPGPQGEKG 630


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 313 PWGSSPDLARRTPLGSPDGDRTPTNEEEVPAVSPASS 349
           P G  P+   R P+G P   R P+  + +    P SS
Sbjct: 313 PQGMRPNFYNR-PMGDPQTSRPPSGNDNMGGGPPPSS 348


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 303 GLSSPLGALSPWGSSPDLARRTP 325
           GL++P G L PW +     +R P
Sbjct: 35  GLNAPTGKLYPWDTQSTYIKRPP 57


>AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidase,
           beta chain protein.
          Length = 67

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 129 LWAGASPDTAKEATEELDEET 149
           LW+ AS + A EA   L+E+T
Sbjct: 27  LWSPASVNNADEAARRLEEQT 47


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)

Query: 328 SPDGD---RTPTNEEEVPAVSPASSR 350
           SPDG     TP N++ +P V PA  R
Sbjct: 595 SPDGTIAFMTPPNQQIIPQVPPAGYR 620


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.125    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,824
Number of Sequences: 2123
Number of extensions: 10472
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 6
length of query: 386
length of database: 516,269
effective HSP length: 65
effective length of query: 321
effective length of database: 378,274
effective search space: 121425954
effective search space used: 121425954
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)