GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000836-TA|BGIBMGA000836-PA|undefined
         (386 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF392450-1|AAL40663.1|  950|Homo sapiens oxysterol-binding prote...    41   0.006
AF323726-1|AAG53407.2|  927|Homo sapiens OSBP-related protein 1 ...    41   0.006
AL356913-1|CAI22673.1|  631|Homo sapiens SH3-domain GRB2-like (e...    35   0.56 
AL354978-7|CAH71847.1|  631|Homo sapiens SH3-domain GRB2-like (e...    35   0.56 
AL139147-3|CAI21944.1|  631|Homo sapiens SH3-domain GRB2-like (e...    35   0.56 
BX538006-1|CAD97958.1| 1105|Homo sapiens hypothetical protein pr...    32   3.9  
BC098376-1|AAH98376.1| 1105|Homo sapiens KIAA1267 protein.             32   3.9  
AL137317-1|CAB70694.1|  576|Homo sapiens hypothetical protein pr...    32   3.9  
AB033093-1|BAA86581.1| 1105|Homo sapiens KIAA1267 protein protein.     32   3.9  
BC046645-1|AAH46645.1|  215|Homo sapiens CCBE1 protein protein.        31   6.9  
AY358347-1|AAQ88713.1|  406|Homo sapiens VPPP1921 protein.             31   6.9  
AB075863-1|BAB85569.1|  418|Homo sapiens KIAA1983 protein protein.     31   6.9  
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.             31   9.1  

>AF392450-1|AAL40663.1|  950|Homo sapiens oxysterol-binding
           protein-like protein OSBPL1B protein.
          Length = 950

 Score = 41.1 bits (92), Expect = 0.006
 Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 2/138 (1%)

Query: 40  WK-FIAVLQRGVLLYYSNKAAARDSGRWRSRKYLDGXXXXXXXXXXXXXXXSFSDGDSHK 98
           W+ F  VL+ GVL +Y  +  A  +   +  K+L                    D   H 
Sbjct: 251 WRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHG 310

Query: 99  LAVPPVEDIAAARQAWVTALNEHIAYSGHYLWAGASPDTAKEATEELDEETKPLGTMQDX 158
             VP    +  +R+ W+ A+ EH AYS HY       D  +E T    +  K L   Q  
Sbjct: 311 FRVPK-NSLQQSREDWLEAIEEHSAYSTHYCSQDQLTDEEEEDTVSAADLKKSLEKAQSC 369

Query: 159 XXXXXXXXXXXXXQLREC 176
                         ++EC
Sbjct: 370 QQRLDREISNFLKMIKEC 387


>AF323726-1|AAG53407.2|  927|Homo sapiens OSBP-related protein 1
           protein.
          Length = 927

 Score = 41.1 bits (92), Expect = 0.006
 Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 2/138 (1%)

Query: 40  WK-FIAVLQRGVLLYYSNKAAARDSGRWRSRKYLDGXXXXXXXXXXXXXXXSFSDGDSHK 98
           W+ F  VL+ GVL +Y  +  A  +   +  K+L                    D   H 
Sbjct: 251 WRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHG 310

Query: 99  LAVPPVEDIAAARQAWVTALNEHIAYSGHYLWAGASPDTAKEATEELDEETKPLGTMQDX 158
             VP    +  +R+ W+ A+ EH AYS HY       D  +E T    +  K L   Q  
Sbjct: 311 FRVPK-NSLQQSREDWLEAIEEHSAYSTHYCSQDQLTDEEEEDTVSAADLKKSLEKAQSC 369

Query: 159 XXXXXXXXXXXXXQLREC 176
                         ++EC
Sbjct: 370 QQRLDREISNFLKMIKEC 387


>AL356913-1|CAI22673.1|  631|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 631

 Score = 34.7 bits (76), Expect = 0.56
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 311 LSPWGSSPDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPC 370
           ++P   SP L R  P G+P     P   + VPA  P +  G+ ++ G      ARP  P 
Sbjct: 198 INPSMESPKLTRPFPTGTPP----PLPPKNVPATPPRT--GSPLTIGPGASSPARPATPL 251

Query: 371 TRRRYVHPNPPAP 383
              R   P PP P
Sbjct: 252 VPCRSTTPPPPPP 264


>AL354978-7|CAH71847.1|  631|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 631

 Score = 34.7 bits (76), Expect = 0.56
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 311 LSPWGSSPDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPC 370
           ++P   SP L R  P G+P     P   + VPA  P +  G+ ++ G      ARP  P 
Sbjct: 198 INPSMESPKLTRPFPTGTPP----PLPPKNVPATPPRT--GSPLTIGPGASSPARPATPL 251

Query: 371 TRRRYVHPNPPAP 383
              R   P PP P
Sbjct: 252 VPCRSTTPPPPPP 264


>AL139147-3|CAI21944.1|  631|Homo sapiens SH3-domain GRB2-like
           (endophilin) interacting protein 1 protein.
          Length = 631

 Score = 34.7 bits (76), Expect = 0.56
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 311 LSPWGSSPDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPC 370
           ++P   SP L R  P G+P     P   + VPA  P +  G+ ++ G      ARP  P 
Sbjct: 198 INPSMESPKLTRPFPTGTPP----PLPPKNVPATPPRT--GSPLTIGPGASSPARPATPL 251

Query: 371 TRRRYVHPNPPAP 383
              R   P PP P
Sbjct: 252 VPCRSTTPPPPPP 264


>BX538006-1|CAD97958.1| 1105|Homo sapiens hypothetical protein
           protein.
          Length = 1105

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 318 PDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPCTRRRYVH 377
           P LA   P  S D +     ++ +  VS +SS GT V+A        RP   C +RR V 
Sbjct: 554 PVLADHIPGDSSDAEEQLHKKQRLNLVS-SSSDGTCVAA------RTRPVLSCKKRRLVR 606

Query: 378 PNPPAPALK 386
           PN   P  K
Sbjct: 607 PNSIVPLSK 615


>BC098376-1|AAH98376.1| 1105|Homo sapiens KIAA1267 protein.
          Length = 1105

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 318 PDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPCTRRRYVH 377
           P LA   P  S D +     ++ +  VS +SS GT V+A        RP   C +RR V 
Sbjct: 554 PVLADHIPGDSSDAEEQLHKKQRLNLVS-SSSDGTCVAA------RTRPVLSCKKRRLVR 606

Query: 378 PNPPAPALK 386
           PN   P  K
Sbjct: 607 PNSIVPLSK 615


>AL137317-1|CAB70694.1|  576|Homo sapiens hypothetical protein
           protein.
          Length = 576

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 318 PDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPCTRRRYVH 377
           P LA   P  S D +     ++ +  VS +SS GT V+A        RP   C +RR V 
Sbjct: 25  PVLADHIPGDSSDAEEQLHKKQRLNLVS-SSSDGTCVAA------RTRPVLSCKKRRLVR 77

Query: 378 PNPPAPALK 386
           PN   P  K
Sbjct: 78  PNSIVPLSK 86


>AB033093-1|BAA86581.1| 1105|Homo sapiens KIAA1267 protein protein.
          Length = 1105

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 318 PDLARRTPLGSPDGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPCTRRRYVH 377
           P LA   P  S D +     ++ +  VS +SS GT V+A        RP   C +RR V 
Sbjct: 554 PVLADHIPGDSSDAEEQLHKKQRLNLVS-SSSDGTCVAA------RTRPVLSCKKRRLVR 606

Query: 378 PNPPAPALK 386
           PN   P  K
Sbjct: 607 PNSIVPLSK 615


>BC046645-1|AAH46645.1|  215|Homo sapiens CCBE1 protein protein.
          Length = 215

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 303 GLSSPLGALSPWGSSPDLA-----RRTPLGSPDGDRTPTNEEEVPAVSPASSRG 351
           G   P G++ P G SPDL+     RR P+G P       ++ E  A  P  S G
Sbjct: 86  GQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPG 139


>AY358347-1|AAQ88713.1|  406|Homo sapiens VPPP1921 protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 303 GLSSPLGALSPWGSSPDLA-----RRTPLGSPDGDRTPTNEEEVPAVSPASSRG 351
           G   P G++ P G SPDL+     RR P+G P       ++ E  A  P  S G
Sbjct: 277 GQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPG 330


>AB075863-1|BAB85569.1|  418|Homo sapiens KIAA1983 protein protein.
          Length = 418

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 303 GLSSPLGALSPWGSSPDLA-----RRTPLGSPDGDRTPTNEEEVPAVSPASSRG 351
           G   P G++ P G SPDL+     RR P+G P       ++ E  A  P  S G
Sbjct: 289 GQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPG 342


>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
          Length = 1791

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%)

Query: 264  ELTKGMRKKKSSSTLNESNDNXXXXXXXXXXXXXTLVTAGLSSPLGALSPWGSSPDLARR 323
            E T   RK++SSS+ + S+ +             +  ++  SS   + S   SSP  A+ 
Sbjct: 1629 EPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSS--SSSSSSSSSSSSSSSSSPSPAKP 1686

Query: 324  TPLGSP---DGDRTPTNEEEVPAVSPASSRGTLVSAGGHVYRNARPYAPCTRRRYVHP 378
             P   P      + P  E  +  VSP+        A G   +    Y P   + +  P
Sbjct: 1687 GPQALPKPASPKKPPPGERSLLPVSPSPRHSLPHVARGTFLKRTSGYFPPLHKSFGTP 1744


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.312    0.125    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,331,953
Number of Sequences: 224733
Number of extensions: 1599913
Number of successful extensions: 3286
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3283
Number of HSP's gapped (non-prelim): 14
length of query: 386
length of database: 73,234,838
effective HSP length: 91
effective length of query: 295
effective length of database: 52,784,135
effective search space: 15571319825
effective search space used: 15571319825
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)