GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000835-TA|BGIBMGA000835-PA|undefined
         (103 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    27   0.18 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   2.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   3.0  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   3.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   5.2  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    22   5.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         21   6.9  
AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           21   6.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    21   6.9  

>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 8   AFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREID 58
           A H+  + P  EL   GY+  V   G+     P++RQ  G+ V +L  + D
Sbjct: 56  AKHHISIKP-VELPDFGYTARVPRHGEFNLFNPAQRQVAGRLVGDLLSQPD 105


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 50  VEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDT 97
           ++E+TR++ QRQQ        L Q +  N+++ + L      G   +T
Sbjct: 739 LQEMTRKLHQRQQHMKK----LQQELLTNEQQLQQLAGVVFEGETEET 782


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 40  PSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKK 81
           P + Q   Q  ++ +++  Q+QQ+QS     L Q  ++ +++
Sbjct: 225 PEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQR 266


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 36  ESARPSERQTGGQFVEELTREIDQRQQRQSTAPP 69
           +  +P E Q   +  + L  +  QRQQ + T PP
Sbjct: 259 DQRQPQEFQQQQRQPQYLQPQQSQRQQEELTCPP 292


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 44   QTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLY 86
            +T G  +E L  +     +  S   PFL     + + K RNL+
Sbjct: 1881 ETYGHLIEVLPPQFHALAKTTSRTRPFLTGGNTQEEIKLRNLW 1923


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/58 (22%), Positives = 25/58 (43%)

Query: 39  RPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTANGRQSD 96
           R  +RQ       +  R+  Q+QQRQ   P     +++++ +  R     +A+    D
Sbjct: 179 RQEQRQQLEDQQRQRWRQQQQKQQRQQRLPAQQWPTVQQSVRAQRQGVTESASSAVPD 236


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 32  DGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNL 85
           D  ++ +RP   Q GG          D+R +++       L++ EE + +   +
Sbjct: 338 DHPIDLSRPGSSQLGGPVSPASDAGYDRRVKQEQRDEEGELEAAEEEEDEEEEI 391


>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 36  ESARPSERQTGGQFVEELTREIDQRQQRQSTAPP 69
           +  +P + Q   +  + L  +  QRQQ + T PP
Sbjct: 187 DQRQPQQFQQQQRQPQYLQPQQSQRQQEELTCPP 220


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 12  PGLVPDEELSRRGYSMYVGSDGDVESARP 40
           PGL   +    RG+   +G+ GD +  RP
Sbjct: 517 PGLKGQK--GERGFKGVMGTPGDAKEGRP 543


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.128    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,453
Number of Sequences: 2123
Number of extensions: 4538
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 103
length of database: 516,269
effective HSP length: 55
effective length of query: 48
effective length of database: 399,504
effective search space: 19176192
effective search space used: 19176192
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 42 (21.0 bits)