Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000835-TA|BGIBMGA000835-PA|undefined
(103 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 0.61
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 0.61
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 28 1.4
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 1.4
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 1.4
AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical ... 27 1.8
AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical ... 27 1.8
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 27 2.4
Z78019-3|CAB01452.1| 123|Caenorhabditis elegans Hypothetical pr... 27 3.2
U21302-1|AAA92286.1| 123|Caenorhabditis elegans dpy-30 protein. 27 3.2
U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical pr... 26 4.3
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 26 4.3
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 26 5.6
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 26 5.6
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 26 5.6
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 25 7.5
U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine rec... 25 7.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 25 7.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 25 7.5
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 25 9.9
U00031-2|AAT92090.1| 377|Caenorhabditis elegans Hypothetical pr... 25 9.9
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 25 9.9
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.1 bits (62), Expect = 0.61
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 36 ESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSR 83
E +P++ + + +E L +E ++R + + PP +LQS+ E + +
Sbjct: 222 EPVKPADLEMDAE-IERLIKEEEERMKNVAEQPPLVLQSLPETPEAQK 268
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.1 bits (62), Expect = 0.61
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 36 ESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSR 83
E +P++ + + +E L +E ++R + + PP +LQS+ E + +
Sbjct: 222 EPVKPADLEMDAE-IERLIKEEEERMKNVAEQPPLVLQSLPETPEAQK 268
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 21 SRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKK 80
++R + Y GS + ++ P + + L ++DQ +++ PP +QS+ E K+
Sbjct: 351 AQRNVNFYFGSATNADAQIPDDVRQITMIPHPLNEKLDQMYGKRTNRPP--VQSVVELKR 408
Query: 81 KSRNLYNPTANGRQSDTNPNF 101
R T N R+ F
Sbjct: 409 DQR---FSTGNNRKQTLEAKF 426
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 40 PSERQTGGQFVEELTREIDQRQQR--QSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDT 97
P R + +F E+ T I + Q + A F+ ++ +EN S +L NGR+ +
Sbjct: 51 PGFRPSPDRFPEKGTTRIPKLQVTWWEKNAVAFIGETSDENNTDSEHLMRDLGNGRREEE 110
Query: 98 NP 99
P
Sbjct: 111 KP 112
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 40 PSERQTGGQFVEELTREIDQRQQR--QSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDT 97
P R + +F E+ T I + Q + A F+ ++ +EN S +L NGR+ +
Sbjct: 51 PGFRPSPDRFPEKGTTRIPKLQVTWWEKNAVAFIGETSDENNTDSEHLMRDLGNGRREEE 110
Query: 98 NP 99
P
Sbjct: 111 KP 112
>AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3c protein.
Length = 726
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 34 DVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNL 85
D + RPSER + G EE R DQ + Q Q + E + +++ L
Sbjct: 407 DTDIRRPSERPSNGPSAEEAARVRDQEIKEQVARELEKRQKVMEQEIRAKIL 458
>AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3a protein.
Length = 743
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 34 DVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNL 85
D + RPSER + G EE R DQ + Q Q + E + +++ L
Sbjct: 407 DTDIRRPSERPSNGPSAEEAARVRDQEIKEQVARELEKRQKVMEQEIRAKIL 458
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 30 GSDGDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPT 89
G D D E + +TGG +E + R+Q++ A L Q ++ ++ YN
Sbjct: 497 GEDMDDEEEDGDDDETGGNEKKEESEADKSRKQKRLEAKIKLKQRFNDDYDETCKFYNKA 556
Query: 90 AN--GRQSDTN 98
N Q+D N
Sbjct: 557 KNEMTEQADLN 567
>Z78019-3|CAB01452.1| 123|Caenorhabditis elegans Hypothetical
protein ZK863.6 protein.
Length = 123
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 43 RQTGGQFVEELTREIDQRQQRQSTAPPFLLQSI 75
+QTG Q T + RQ ST P LLQ +
Sbjct: 54 QQTGNQSAPRNTSTVPTRQYLDSTVVPILLQGL 86
>U21302-1|AAA92286.1| 123|Caenorhabditis elegans dpy-30 protein.
Length = 123
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 43 RQTGGQFVEELTREIDQRQQRQSTAPPFLLQSI 75
+QTG Q T + RQ ST P LLQ +
Sbjct: 54 QQTGNQSAPRNTSTVPTRQYLDSTVVPILLQGL 86
>U28732-1|AAB04901.2| 540|Caenorhabditis elegans Hypothetical
protein F45E1.5 protein.
Length = 540
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 31 SDGDVESARPSERQTG---GQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYN 87
S+ D +S + G QFV++L + D R + + APP L+ E + N
Sbjct: 35 SEHDTDSLKAQSEGRGLKHVQFVDKLKFDWDDRPSQTNPAPPKTLEDYEIESMLGDDKDN 94
Query: 88 PTAN 91
TA+
Sbjct: 95 KTAD 98
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 RRGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQQRQST-----APPFLLQSIE 76
R+ Y Y E + +E+ + +D+ + +Q T AP + I
Sbjct: 669 RKAYEDYANGGPTYAHLDSKEMEKVINAIEDKKKWLDEARHKQETRSKTDAPVVFTEEIL 728
Query: 77 ENKKKSRNLYNPTANGRQ 94
+NK N+ NP N ++
Sbjct: 729 QNKNVFENVVNPILNKKK 746
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 2 NSDKNHAFHNPGLVPDEELSRRGYSMYVGSDGDVESARPSERQTGGQFVEELTREIDQRQ 61
N+D N + P P R Y V SDG+ + + ++ + + +E TR+ ++
Sbjct: 345 NTDMNSSSDLPRKTPRRSCVRGTYKDLVDSDGEEDKEKKTKMEMEKE--KEKTRKKEENN 402
Query: 62 QR-QSTAPPFLLQSIEENKKKSRNLYNPT 89
+R + LL+ + +++R Y T
Sbjct: 403 KRKEKKEAEKLLERSYKRAEQARVRYEKT 431
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 33 GDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPP----FLLQSIEENKKKSRNLY 86
GD S R + T ++ +E + DQ+ R+S A P F+ Q +++ + R +Y
Sbjct: 184 GDASSPRVQRQYTAEKYSKEDQDDDDQKDLRKSVAYPSHKFFMTQYVKDECRVRRWVY 241
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 33 GDVESARPSERQTGGQFVEELTREIDQRQQRQSTAPP----FLLQSIEENKKKSRNLY 86
GD S R + T ++ +E + DQ+ R+S A P F+ Q +++ + R +Y
Sbjct: 186 GDASSPRVQRQYTAEKYSKEDQDDDDQKDLRKSVAYPSHKFFMTQYVKDECRVRRWVY 243
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 25.4 bits (53), Expect = 7.5
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 31 SDGDVESARPS-----ERQTGGQFVEELT--------REIDQRQQRQSTAPPFLLQSIEE 77
++GD+ + R S +R G F++ T R D +++ Q+ +PP L E
Sbjct: 4 TEGDISATRKSSRTRLKRDFGTDFIDPTTVRISDKTNRTSDVKRKSQTQSPPLNLDVEEI 63
Query: 78 NKKKSRNLYNPTANGRQSD 96
K+ + T N R+SD
Sbjct: 64 KKELGEPIQVATDNVRRSD 82
>U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 34 protein.
Length = 355
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 24 GYSMYVGSDGDVESARPSERQTGGQFVEELTREI 57
G MY+ SDG ++ + + Q G+ ++ELT +I
Sbjct: 160 GVCMYMTSDGPNDNLQSNCFQRQGRNIDELTTQI 193
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 76 EENKKKSRNLYNPTANGRQ 94
EE++KKS +Y P NG Q
Sbjct: 649 EEDRKKSEEIYVPYNNGEQ 667
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 76 EENKKKSRNLYNPTANGRQ 94
EE++KKS +Y P NG Q
Sbjct: 871 EEDRKKSEEIYVPYNNGEQ 889
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 34 DVESARPSERQTGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNL 85
++E+ P + + QF++ R + +RQ + +LQ+ NK +R +
Sbjct: 762 NLEANPPPDPSSSPQFLDAFDRGLIKRQSKGKYQAKEILQTYPNNKLDARGI 813
>U00031-2|AAT92090.1| 377|Caenorhabditis elegans Hypothetical
protein B0361.5b protein.
Length = 377
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 63 RQSTAPPFLLQSIEENKKKSRNLY 86
++ +PP +L+S+ E +S+N+Y
Sbjct: 19 KKVVSPPMMLRSVRELTNQSKNVY 42
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 69 PFLLQSIEENKKKSRNLYNPTANGRQSDTN 98
PF++ + EN + S ++ N RQ+DT+
Sbjct: 1267 PFVMDWLNENDEHSMDILRNAYNCRQADTS 1296
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.128 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,945,665
Number of Sequences: 27539
Number of extensions: 113686
Number of successful extensions: 312
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 23
length of query: 103
length of database: 12,573,161
effective HSP length: 71
effective length of query: 32
effective length of database: 10,617,892
effective search space: 339772544
effective search space used: 339772544
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
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