Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000834-TA|BGIBMGA000834-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(351 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 50 2e-08
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 45 1e-06
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 43 4e-06
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 41 2e-05
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 33 0.003
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 32 0.005
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 31 0.013
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 30 0.022
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 2.5
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 22 5.8
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 7.7
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 50.4 bits (115), Expect = 2e-08
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 201 PLVCFACKLKFDTIQKLSQHIST-CDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVTC 259
P VC C + L H+ T C+ CN F L H+ TH+ P C
Sbjct: 249 PNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRC 308
Query: 260 E-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEHVLKSDQ 318
C F+ + H +T ++ Y+C+ C F D L +H + H +
Sbjct: 309 PVCDRRFSQSSSVTTHMRTHSGER------PYRCRLCKKAFSDSSTLTKHLRIHSGEKPY 362
Query: 319 RVCDICGHTFIGSDALLKH 337
C +C F S L +H
Sbjct: 363 E-CKLCLLRFSQSGNLNRH 380
Score = 43.6 bits (98), Expect = 2e-06
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 201 PLVCFACKLKFDTIQKLSQHISTCDRSQR-NCVQCNILFDSKTKLQQHLLTHNQPFPVTC 259
P C C F L+ H+ T + C C+ F + + H+ TH+ P C
Sbjct: 277 PYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 336
Query: 260 E-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEH 312
C F++ L +H + + S Y+CK C F L RH + H
Sbjct: 337 RLCKKAFSDSSTLTKHLR------IHSGEKPYECKLCLLRFSQSGNLNRHMRVH 384
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 44.8 bits (101), Expect = 1e-06
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 217 LSQHIST-CDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVTCE-CGDTFNNKEMLMRH 274
L H+ T C+ CN F L H+ TH+ P C C F+ + H
Sbjct: 9 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTH 68
Query: 275 RQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEHVLKSDQRVCDICGHTFIGSDAL 334
+T ++ Y+C+ C F D L +H + H + C +C F S L
Sbjct: 69 MRTHSGER------PYRCRLCKKAFSDSSTLTKHLRIHSGEKPYE-CKLCLLRFSQSGNL 121
Query: 335 LKH 337
+H
Sbjct: 122 NRH 124
Score = 43.6 bits (98), Expect = 2e-06
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 201 PLVCFACKLKFDTIQKLSQHISTCDRSQR-NCVQCNILFDSKTKLQQHLLTHNQPFPVTC 259
P C C F L+ H+ T + C C+ F + + H+ TH+ P C
Sbjct: 21 PYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 80
Query: 260 E-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEH 312
C F++ L +H + + S Y+CK C F L RH + H
Sbjct: 81 RLCKKAFSDSSTLTKHLR------IHSGEKPYECKLCLLRFSQSGNLNRHMRVH 128
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 42.7 bits (96), Expect = 4e-06
Identities = 36/140 (25%), Positives = 47/140 (33%), Gaps = 9/140 (6%)
Query: 201 PLVCFACKLKFDTIQKLSQHIST-CDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVTC 259
P C C F L H T C +C+ F L+ H+ H P C
Sbjct: 134 PFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 193
Query: 260 E-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEHVLKSDQ 318
E C F L RH + ++ Y C+ C F D QL H H +
Sbjct: 194 EHCDRQFVQVANLRRHLRVHTGER------PYGCEHCSMKFSDSNQLKAHVLIHTNEKPF 247
Query: 319 RVCDICGHTFIGSDALLKHR 338
CD C F L+ H+
Sbjct: 248 E-CDKCRGRFRRRHHLVHHK 266
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 40.7 bits (91), Expect = 2e-05
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 214 IQKLSQHISTCDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVTCE-CGDTFNNKEMLM 272
+Q+L +I CV C+ + K+ LQ H TH P C+ CG F K L
Sbjct: 120 LQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLK 179
Query: 273 RHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEH 312
H A M ++C C F + L +H + H
Sbjct: 180 THMGVHRAK--PPMRVLHQCPVCHKKFTNALVLQQHIRLH 217
Score = 33.5 bits (73), Expect = 0.002
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Query: 242 TKLQQHL--LTHNQPFPVTCE-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDV 298
+KLQQ + + H P C C + K L H +T ++ +KCK CG
Sbjct: 118 SKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGER------PFKCKICGRA 171
Query: 299 FKDRFQLYRHAKEHVLKSDQRV---CDICGHTFIGSDALLKH 337
F + L H H K RV C +C F + L +H
Sbjct: 172 FTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQH 213
Score = 25.4 bits (53), Expect = 0.62
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 291 KCKECGDVFKDRFQLYRHAKEHVLKSDQRVCDICGHTFIGSDALLKHRNEDHKKP 345
+C C V + L H + H + + C ICG F L H KP
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERPFK-CKICGRAFTTKGNLKTHMGVHRAKP 189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.003
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 222 STCDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYAD 281
+TCD NC + L + L++ + H+ P CG + L H + +
Sbjct: 289 ATCDCP--NCQEAERLGPAGVHLRKKNI-HSCHIP---GCGKVYGKTSHLKAHLRWHTGE 342
Query: 282 QLQSMGWGYKCKECGDVFKDRFQLYRHAKEHVLKSDQRVCDICGHTFIGSDALLKH 337
+ W + CG F +L RH + H + + C IC F+ SD L KH
Sbjct: 343 RPFVCNWLF----CGKRFTRSDELQRHLRTHTGEK-RFACPICNKRFMRSDHLAKH 393
Score = 30.3 bits (65), Expect = 0.022
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 201 PLVC--FACKLKFDTIQKLSQHISTCDRSQR-NCVQCNILFDSKTKLQQHLLTHN 252
P VC C +F +L +H+ T +R C CN F L +H+ THN
Sbjct: 344 PFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKHVKTHN 398
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 32.3 bits (70), Expect = 0.005
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 292 CKECGDVFKDRFQLYRHAKEHVLKSDQRV--CDICGHTFIGSDALLKH 337
CK C F + L H + H +D+R CDICG F D L H
Sbjct: 82 CKYCNRQFTKSYNLLIHERTH---TDERPYSCDICGKAFRRQDHLRDH 126
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCE-CGDTFNNKEMLMRH 274
C CN F L H TH P +C+ CG F ++ L H
Sbjct: 82 CKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 31.1 bits (67), Expect = 0.013
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 201 PLVCFACKLKFDTIQKLSQH--ISTCDRSQRNCVQCNILFDSKTKLQQHLLTHNQPFPVT 258
P C C +F L H + T +R R C C+ F L++HL H P
Sbjct: 9 PFECQECHKRFTRDHHLKTHMRLHTGERPYR-CEHCDRQFVQVANLRRHLRVHTGERPYG 67
Query: 259 CE 260
CE
Sbjct: 68 CE 69
Score = 24.6 bits (51), Expect = 1.1
Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 250 THNQPFPVTC-ECGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRH 308
TH P C EC F L H + ++ Y+C+ C F L RH
Sbjct: 3 THTGEKPFECQECHKRFTRDHHLKTHMRLHTGER------PYRCEHCDRQFVQVANLRRH 56
Query: 309 AKEH 312
+ H
Sbjct: 57 LRVH 60
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.022
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 290 YKCKECGDVFKDRFQLYRHAKEHVLKSDQRVCDIC 324
+KCK+C V + + + H+K H+ + + C C
Sbjct: 202 FKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKC 236
Score = 25.8 bits (54), Expect = 0.47
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 230 NCVQCNILFDSKTKLQQHLLTHNQPFPVTCE-CGDTFNNKEMLMRH 274
+C CNI F H+ H P TC CG ++K H
Sbjct: 472 SCQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMCGVECSDKVSFFLH 517
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCE-CGDTF 265
C C F LQ H+ TH P +C C F
Sbjct: 10 CTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAF 45
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 225 DRSQRNCVQCNILFDSKTKLQQHLLTHNQ 253
D + +C +C+ TK H L+HN+
Sbjct: 64 DALKSDCAKCSEKQKEMTKKVIHFLSHNK 92
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.8 bits (44), Expect = 7.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 242 TKLQQHLLTHNQPFPVTCECGDTFN 266
TK + +L TH P CG FN
Sbjct: 371 TKTRTNLPTHRHPQDEIPYCGKIFN 395
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.134 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,090
Number of Sequences: 317
Number of extensions: 4001
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 22
length of query: 351
length of database: 114,650
effective HSP length: 57
effective length of query: 294
effective length of database: 96,581
effective search space: 28394814
effective search space used: 28394814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
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