Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000834-TA|BGIBMGA000834-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(351 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 42 6e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 40 0.003
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 38 0.012
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 37 0.028
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 34 0.15
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 32 0.79
03_05_0894 + 28571015-28571391,28571651-28571768,28572069-285723... 32 0.79
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 31 1.0
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 31 1.4
12_01_0971 - 9781887-9781924,9782036-9782247,9782327-9784114,978... 31 1.8
11_06_0533 + 24734177-24735787 30 3.2
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 30 3.2
12_02_0713 + 22437458-22437651,22439100-22440612,22440755-22441282 29 4.2
11_04_0073 + 13201394-13201428,13201579-13201840 29 4.2
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 29 4.2
06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43... 29 4.2
02_05_0201 + 26687369-26689228 29 4.2
01_01_0628 - 4731052-4731601,4731825-4732782,4733143-4733953,473... 29 4.2
08_02_1577 + 27985066-27985434,27985520-27985594,27986159-279863... 29 5.6
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 5.6
12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362 29 7.4
04_04_1506 + 34051227-34051310,34051475-34051903,34052734-34053357 29 7.4
01_06_1495 + 37769982-37771496 29 7.4
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 29 7.4
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 28 9.7
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 28 9.7
09_01_0106 + 1673737-1674522,1674625-1675089 28 9.7
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 28 9.7
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474... 28 9.7
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 28 9.7
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 42.3 bits (95), Expect = 6e-04
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 250 THNQPFPVTCE-CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRH 308
TH P + C+ C F++ + L H + +++ + GY C C D F +R L RH
Sbjct: 457 THPSP-GLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERH 515
Query: 309 AKE-----HVLKSDQRVCDICGHTFIGSDALLKHRNEDHKK 344
+E ++ S C C F+ +D L +H DH +
Sbjct: 516 VQEKHGAQYLQYSTLLRCISCNSNFLNTDLLWQHIVSDHSR 556
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 39.9 bits (89), Expect = 0.003
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 234 CNILFDSKTKLQQHLLTHN-QPFPVTCE-CGDTFNNKEMLMRHRQTCYADQLQSMGWG-Y 290
C + K L +HLLTH + F E C F K + RH Q + D +
Sbjct: 294 CPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEF 353
Query: 291 KCKE--CGDVFKDRFQLYRHAKEHV-LKSDQRVC--DICGHTFIGSDALLKHRNEDHK 343
C E CG FK +L +H + HV L + +C C F + L H H+
Sbjct: 354 ICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCHR 411
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 37.9 bits (84), Expect = 0.012
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 26/154 (16%)
Query: 207 CKLKFDTIQKLSQHIS------TCDRSQRNCV----QCNILFDSKTKLQQHLLTH---NQ 253
C KF + +H+ T +S R V CN +F +K+++H +H +
Sbjct: 124 CGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDY 183
Query: 254 PFPVTCE--CGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDV-FKDRFQLYRHAK 310
V CE C TF N E L H Q C+ +C CG+ K + + A
Sbjct: 184 VEVVCCEPGCMKTFTNVECLRAHNQACHQ--------YVQCDICGEKHLKKNIKRHLRAH 235
Query: 311 EHVLKSDQRVCDI--CGHTFIGSDALLKHRNEDH 342
E V +++ C C +F L KH H
Sbjct: 236 EEVPSTERIKCSFEGCECSFSNKSNLTKHIKASH 269
Score = 35.9 bits (79), Expect = 0.049
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTC---ECGDTFNNKEMLMRHRQTCYADQLQSMG 287
C +C F L+QH+ +H+ C +C ++ K+ L RH L+ G
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRH-------MLKHQG 114
Query: 288 WGYKCK--ECGDVFKDRFQLYRHAKE-H----VLKSD-QRVC--DICGHTFIGSDALLKH 337
+ C CG F + + RH KE H KS+ Q VC + C F + + KH
Sbjct: 115 KLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKH 174
Query: 338 RNEDHKK 344
E H K
Sbjct: 175 -EESHVK 180
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 290 YKCKECGDVFKDRFQLYRHAKEHVLKSDQR--VCDI--CGHTFIGSDALLKH 337
+ C+ECG F+ L +H + H SD+R +C + C ++I D L +H
Sbjct: 60 HTCQECGASFQKPAHLKQHMQSH---SDERSFICPLEDCPFSYIRKDHLNRH 108
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 36.7 bits (81), Expect = 0.028
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 234 CNILFDSKTKLQQHLLTHNQPFPVTCE--CGDTFNNKEMLMRHRQTCYADQLQSMGWGYK 291
C F L++H HN+ + E CG F + L RH + Q +
Sbjct: 94 CGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHH-LIHTGQKD-----FI 147
Query: 292 CKE--CGDVFKDRFQLYRHAKEHVLKSDQRVCDI--CGHTFIGSDALLKHRNEDHKK 344
C CG F F L H K H L+ + VC CG F SD+ LK + H+K
Sbjct: 148 CPHPGCGKAFSLDFNLRSHLKTHALE-NYHVCPFPACGKRFT-SDSKLKSHVKGHEK 202
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 34.3 bits (75), Expect = 0.15
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 230 NCVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYADQLQSMGWG 289
+C +C F + ++++H+ ++P + C CG ++M+ TC + G
Sbjct: 457 HCNKCGQAFQQR-EMEKHMKVFHEP--LQCPCGVVLEKEDMVQHQSSTCPLRLIVCRFCG 513
Query: 290 YKCKECGDVFKDRFQLYRHAKEH--VLKSDQRVCDICGHTFIGSD 332
+ G+ R +L R+ EH + S CD CG + + D
Sbjct: 514 DTVQAGGEPLDARDRL-RNMCEHESICGSRTAPCDSCGRSVMLKD 557
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYADQLQS 285
C +C+ + + + HL T +C+CG F+ E + H+ TC A + Q+
Sbjct: 146 CARCSKAYAVHSDYKAHLKTCGTRGH-SCDCGRVFSRVESFIEHQDTCNASRGQA 199
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 313 VLKSDQRVCDICGHTFIGSDALLKHRNEDHKKP 345
+L+SD+ VC+IC F L HR HK P
Sbjct: 60 LLESDRYVCEICNQGFQRDQNLQMHRRR-HKVP 91
>03_05_0894 +
28571015-28571391,28571651-28571768,28572069-28572376,
28572452-28572583,28572672-28572770,28572950-28573487
Length = 523
Score = 31.9 bits (69), Expect = 0.79
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 291 KCKECGDVFKDRFQLYRHAKEHV-LKSDQRVCDICGH-TFIGSDALLKHRNEDHKKPAN 347
KC C F++R+QL +EH+ LK +C C F + L + H+KP N
Sbjct: 279 KCLRCNGEFEERYQLLHENQEHLPLKKGDWICKRCNFLNFAKNTRCL----QCHEKPTN 333
>03_02_0651 +
10183050-10184167,10184350-10184974,10185023-10185208,
10185325-10185660
Length = 754
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 173 LDSDVEIVKEIILKESXXXXXXXXXXXXPLVCFACKLKFDTIQKLSQHISTCDRS-QRNC 231
LDS V++++EI + S L C C+ I KL HI++C S +
Sbjct: 679 LDS-VDVIEEIDQRGSATISSDDRVLAMELRCHRCRSAHPNIPKLKSHIASCKSSFPSHL 737
Query: 232 VQCNILFDSKT 242
+Q + L S T
Sbjct: 738 LQKDRLLSSST 748
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 313 VLKSDQRVCDICGHTFIGSDALLKHRNEDHKKP 345
+L+SD+ VC+ICG F L HR HK P
Sbjct: 25 LLESDRYVCEICGQGFQREQNLQMHRRR-HKVP 56
>12_01_0971 -
9781887-9781924,9782036-9782247,9782327-9784114,
9784630-9785432
Length = 946
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 19 HVCILNDPTIILHLKSCLTITISPGDHLPKDI-CVSCVDQLSQFYNLQLNARCSQD 73
HV +N P+ + L+ + + LP +I + ++ LS FYN++ + +C Q+
Sbjct: 627 HVNEINIPSSVCRLQKLERLIVDYPMRLPDEIGFLQALEMLSLFYNIEYSIKCLQE 682
>11_06_0533 + 24734177-24735787
Length = 536
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 84 KKTTET-KLTVQPL-PDSEYNSDSLLEFLNNTENIEEYLNNLGKEDIPSIVNMLDRNEHT 141
+KT ET L ++ + + + + +L+ + +EN+ L NL K + D +H+
Sbjct: 371 EKTLETLSLEMKKIHAEKDAAAAMVLQKSDESENLRAELKNLHKSISELRIRCNDLTDHS 430
Query: 142 NDSVKNMNRTIKQCSPKKKEKTKNLQMEIDVLDSDV 177
+ + N ++ S +K E TK L++++ L+S V
Sbjct: 431 SRLQADKNSVMRALSNEKSESTK-LRLKLRELESYV 465
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTC-YADQLQSMG-- 287
C CN F + LQ H HN P+ + + + + + TC + D +++G
Sbjct: 45 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPAQAQRRRVYLCPEPTCVHHDPARALGDL 104
Query: 288 WGYKCKECGDVFKDRFQLYRHAKEHVLKSD----QRVCDI------CGHTFIGSDALLKH 337
G K C + +++ + +K + ++SD ++C CG F D+ + H
Sbjct: 105 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITH 164
Query: 338 R 338
R
Sbjct: 165 R 165
>12_02_0713 + 22437458-22437651,22439100-22440612,22440755-22441282
Length = 744
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 272 MRHRQTCYADQLQSMGWGYKCKECGDVFKDRFQLYRHAKEHVL---KSDQRVCDICGHTF 328
+R R + + + SM KCKEC D+ ++Y E L +S + + +I HTF
Sbjct: 418 VRRRISGDMEAMASMERILKCKECSDLLLQSLEIYTRLHERTLSNKESWRSLINILVHTF 477
>11_04_0073 + 13201394-13201428,13201579-13201840
Length = 98
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 127 DIPSIVNMLDRNEHTNDSVKNMNRTI-KQCSPKKKEKTKNLQMEIDVL 173
DIP + L RN T VKNM R I +C+ +++ + VL
Sbjct: 2 DIPQVAQFLSRNIRTRMRVKNMMRLICSKCATSARKRMATPEQPKSVL 49
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYA 280
C +C+ + + + HL T TC+CG F+ E + H+ C A
Sbjct: 145 CSRCSKAYAVHSDYKAHLKTCGTRGH-TCDCGRVFSRVESFIEHQDACNA 193
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 313 VLKSDQRVCDICGHTFIGSDALLKHRNEDHKKP 345
+L+SD+ VC+IC F L HR HK P
Sbjct: 59 LLESDRYVCEICNQGFQRDQNLQMHRRR-HKVP 90
>06_01_0047 -
429838-429960,430413-430508,430589-430596,431088-431141,
431226-431274,431368-431466,431560-431639,431926-431989,
432082-432255,432342-432965,433046-433189,433262-433372,
433442-433498,433664-433798
Length = 605
Score = 29.5 bits (63), Expect = 4.2
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 75 LESCLQGKCKKTTETKLTVQPLPDSEYNSDSLLEFLNNTENI--EEYLNNLGKEDIPSI- 131
LE C Q ++ + P D Y DS +N ++ +++LN + D+ +
Sbjct: 9 LEDCSQS-LNESDDIHSESLPNNDDNYQCDSSDNSDSNHMDVPSQDHLNVISTNDLNDMD 67
Query: 132 VNMLDRNE-HTNDSVKNMNRTIKQCSPKKKEKTKNLQMEIDVLDSDV---EIVKEII 184
V+ NE TN+ +K + R + + + + K + E LD+DV +++++II
Sbjct: 68 VSQPHVNEISTNELLKTLKRKLSKSKRSEDDNIKMKRSESIELDNDVMINQVLRDII 124
>02_05_0201 + 26687369-26689228
Length = 619
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 215 QKLSQHISTCDRSQRNCVQCNILFDSKTKLQQHLLTHNQ 253
Q + QHIST R C C +F S L H +H +
Sbjct: 282 QVVPQHISTVPRGMFECKACKKVFTSHQALGGHRASHKK 320
>01_01_0628 -
4731052-4731601,4731825-4732782,4733143-4733953,
4734038-4734241,4734695-4734802,4735930-4736369,
4736463-4736541
Length = 1049
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 SDQRVCDICGHTFIGSDALLKHRNEDHK 343
S ++ DIC TF+ +D LL + + H+
Sbjct: 599 SQAKITDICSRTFLATDPLLSNTSSSHE 626
>08_02_1577 +
27985066-27985434,27985520-27985594,27986159-27986320,
27986415-27986590,27986681-27986756,27987154-27987282,
27987363-27987482,27987734-27987815,27988016-27988110,
27988427-27988491,27988604-27988802,27989426-27989620,
27989866-27989960,27990059-27990194,27990265-27990482,
27990729-27990856,27991148-27991617
Length = 929
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 295 CGDVFKDRFQLYRHAKEHVLKSDQRVCDICGH---TFIGSDALLKHRNEDHK-KPA 346
CG ++KD L A+ V+ + C ICG + ++A K RN D KPA
Sbjct: 108 CGMIYKDEGHLVEAAEFVVINTRSLKCCICGSLKAKYSNAEAYQKARNADPSYKPA 163
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.1 bits (62), Expect = 5.6
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 14/121 (11%)
Query: 231 CVQCNILFDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYADQLQSMG--W 288
C CN F LQ H HN P+ + G + + + D +++G
Sbjct: 50 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALGDLT 109
Query: 289 GYKCKECGDVFKDRFQLYRHAKEHVLKSDQRV-----------CDICGHTFIGSDALLKH 337
G K C + +++ + +K++ ++SD + CD CG F D+ + H
Sbjct: 110 GIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCD-CGTLFSRRDSFITH 168
Query: 338 R 338
R
Sbjct: 169 R 169
>12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362
Length = 197
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 241 KTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRHRQTCYADQLQSMGWGYKCKECGDVFK 300
++K QQ+ ++ PFP+ E GD NN L ++ A L + K E K
Sbjct: 84 RSKKQQNQSSNPPPFPIPKEGGDDANNASKLHSKKKKRVAPSLNE-EYEKKRAEDEKAKK 142
Query: 301 DRFQLYRHAKEHVLKSDQRVCDI 323
+R + + +E +S+ R D+
Sbjct: 143 EREAIIQAKREERERSEARRRDL 165
>04_04_1506 + 34051227-34051310,34051475-34051903,34052734-34053357
Length = 378
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 301 DRFQLYRHAKEHVLKSDQRVCDICGH-TFIGSDALLKH 337
D+ QL R +H+L + C CGH T I +DA+++H
Sbjct: 44 DKVQLPRRPGKHLLTAADLGCS-CGHNTLIVADAIVEH 80
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 222 STCDRSQRNCVQCNIL-FDSKTKLQQHLLTHNQPFPVTCECGDTFNNKEMLMRH 274
S CD+S C +CN F L+ H H C CG TF+ K+ L H
Sbjct: 345 SHCDKSY-TCSRCNTKKFSVIADLKTHE-KHCGRDKWLCSCGTTFSRKDKLFGH 396
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 316 SDQRVCDICGHTFIGSDALLKHRNEDHK 343
S ++ DIC TF+ +D LL + + H+
Sbjct: 572 SQAKITDICSKTFLATDHLLSNTSSSHE 599
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 83 CKKTTETKLTVQPLPDSEYNSDSLLEFLNNTENIEEYLNNLGKEDIPSIVNMLDRNEHTN 142
C ++ + P+P SE++SD + N+ ++++L + D + L N N
Sbjct: 881 CSDSSRPETIPVPIPGSEFHSDDNNLEAKSLPNLRSHIHDLERSDSFQLSRSLQSNGE-N 939
Query: 143 DSVKNMNRTIKQCSPKKKEKT 163
+ V+ + T ++ E T
Sbjct: 940 NGVEPVKSTTSDLPIQEPEDT 960
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 259 CECGDTFNNKEMLMRHRQTCYA 280
C+CG F+ K+ L+ HR C A
Sbjct: 153 CDCGILFSRKDSLLTHRAFCDA 174
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 284 QSMGWGYKCKECGDVFKDRFQLYRHAKEHVLKSDQRVCD-ICGHTFIGS 331
QS Y+C++CG +F L H K H SD+R D F+GS
Sbjct: 303 QSRRGPYECRKCGTMFSSGQALGWHMKSH--NSDERWGDKRVPSAFVGS 349
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 125 KEDIPSIVNMLDRNEHTNDSVKNMNRTIKQCSPKKKEKTKNLQMEIDVLDSDVEIVKE 182
+EDI + L++ E +++ + N+ ++ KE+ K + EI L +E +E
Sbjct: 398 EEDIRRLRLSLEKAEQESNNAREENKRFRESEKASKEQEKQTEAEIQKLKEKMEKDRE 455
>02_04_0131 -
20046033-20046505,20047140-20047233,20047343-20047434,
20047560-20047611,20047721-20047878,20048190-20048280,
20048397-20049455
Length = 672
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 133 NMLDRNEHTNDSVKNMNRTIKQCSPKKKEKTKNLQMEIDVLDSDVE 178
++L ++TNDS N R + S ++ T + Q + DVL VE
Sbjct: 112 SILAATDNTNDSADNCTRDVDYNSSGRRSTTSHDQGQHDVLSEIVE 157
>01_07_0306 +
42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 142 NDSVKNMNRTIKQCSPKKKEKTKNLQMEIDVLDSDVEIV 180
++ +K + + + S K KEKTK+LQ I LD +V
Sbjct: 85 SEELKRIRGGVVESSAKAKEKTKSLQDSIQKLDKYRNVV 123
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,210,977
Number of Sequences: 37544
Number of extensions: 416544
Number of successful extensions: 1207
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1175
Number of HSP's gapped (non-prelim): 47
length of query: 351
length of database: 14,793,348
effective HSP length: 83
effective length of query: 268
effective length of database: 11,677,196
effective search space: 3129488528
effective search space used: 3129488528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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