GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000832-TA|BGIBMGA000832-PA|IPR001245|Tyrosine protein
kinase, IPR011009|Protein kinase-like, IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase
         (184 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...   128   4e-32
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.5  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.1  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   8.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score =  128 bits (308), Expect = 4e-32
 Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 4/132 (3%)

Query: 13  DLAARNILVDSTGVLKVADFGLSRS----GVYVHTRSKPVPLRWLAPEAIVHSQYCSKSD 68
           DLAARN+LV     +KV+DFGLSR      VY       +P+RW+A E++ H +Y + SD
Sbjct: 617 DLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVRWMALESLTHQRYTTYSD 676

Query: 69  VWAFAVLLWEIATLGGFPYAELSNYQVPAFLTGGGRLPKPMRASVRLYELMVECWSDDPH 128
           VW+F VLLWEI TLGG PY  + + ++  FL  G RL +P   S  LY +M+ CW + P 
Sbjct: 677 VWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPANCSPDLYAVMLNCWKECPK 736

Query: 129 DRPTFAQIVDKL 140
           +RPTF ++   L
Sbjct: 737 NRPTFTELSKSL 748


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 64  CSKSDVWAFAVLLWEIATLGGFPYAELSNYQVPAFLTG 101
           C+K+      +L W IA L   P   ++ Y    ++ G
Sbjct: 182 CTKTRASLICLLAWFIAALFTSPILAITQYGPEEYVDG 219


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 17  RNILVDSTGVLKVADFGLSRSGVYVHTRSKPVP 49
           R  L++   V K+ +  L     YV  R KP P
Sbjct: 468 RPALIEGWKVEKIQEIYLEALRAYVDNRRKPKP 500


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 100 TGGGRLPKPMRASVRLYEL 118
           TGG  LPK   A + +Y++
Sbjct: 76  TGGYTLPKESNAIIHIYDV 94


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 64  CSKSDVWAFAVLLWEIATLGGFPYAELSNYQVPAFLTG 101
           C+K+      +L W IA L   P   ++ Y+   +  G
Sbjct: 182 CTKTRASLICLLAWFIAALFTSPMLVIAEYKQLDYFDG 219


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 142 IQQQLYVDLECVLPPSEEDIGFKD 165
           IQ+++Y +L  +   S+  I F D
Sbjct: 18  IQEKVYQELRDIFQDSDRPITFND 41


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.140    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,768
Number of Sequences: 317
Number of extensions: 2033
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 184
length of database: 114,650
effective HSP length: 53
effective length of query: 131
effective length of database: 97,849
effective search space: 12818219
effective search space used: 12818219
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)