BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000831-TA|BGIBMGA000831-PA|undefined (55 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8 >SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 499 Score = 26.6 bits (56), Expect = 2.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Query: 1 MFYTVKAAAIITLSAYSTVERIVSSHRSPAGLIDGGSAAVLLGLRIRKETTPR 53 M T A + L S +V A L GGS A LL LR +K PR Sbjct: 367 MLLTSTIAICMLLPPGSNFMSLVGFFSFAAWLFYGGSFAALLWLRYKKPEMPR 419 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.319 0.132 0.357 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,587,278 Number of Sequences: 59808 Number of extensions: 38314 Number of successful extensions: 60 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59 Number of HSP's gapped (non-prelim): 1 length of query: 55 length of database: 16,821,457 effective HSP length: 35 effective length of query: 20 effective length of database: 14,728,177 effective search space: 294563540 effective search space used: 294563540 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 52 (25.0 bits)
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