Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000829-TA|BGIBMGA000829-PA|IPR004871|CPSF A subunit,
C-terminal, IPR011046|WD40-like, IPR003006|Immunoglobulin/major
histocompatibility complex
(1218 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 1988 0.0
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 1985 0.0
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 1983 0.0
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 558 e-158
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 558 e-158
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 558 e-158
BC009780-1|AAH09780.1| 275|Homo sapiens SF3B3 protein protein. 464 e-130
U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein. 149 8e-35
L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1 pr... 149 8e-35
BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA bin... 149 8e-35
BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA bin... 149 8e-35
BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA bin... 149 8e-35
AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA bin... 149 8e-35
AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum G... 147 2e-34
U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding fa... 145 1e-33
U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylat... 48 3e-04
BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenyl... 48 3e-04
BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein. 34 3.6
AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prost... 34 3.6
AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prost... 34 3.6
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 1988 bits (4931), Expect = 0.0
Identities = 932/1226 (76%), Positives = 1081/1226 (88%), Gaps = 17/1226 (1%)
Query: 1 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFG 60
M+LYNLTLQ ++ I+ A+HGNFSGTKQQEI++SRGK LELLRPDPNTGKVHT + +E+FG
Sbjct: 37 MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 96
Query: 61 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 120
V+RS+MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN+ EK+HQETFGKSGCRRIVPGQ+
Sbjct: 97 VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 156
Query: 121 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180
L++DPKGRAVMI AIEKQKLVYILNRDA ARLTISSPLEAHK+NTLVYH+VGVDVGFENP
Sbjct: 157 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 216
Query: 181 MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG 240
MFACLE+DYEEAD+DPTGEAA TQQTLTFYELDLGLNHVVRKYSEPLEEH NFLITVPG
Sbjct: 217 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 276
Query: 241 GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 300
G+DGPSGVLICSENY+TYKN GDQ DIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
Sbjct: 277 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 336
Query: 301 FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ 360
FLAQTEQGDIFKIT+ETDEDMVTEI+LKYFDTVPVA +MCVLKTGFLFVA EFGNHYLYQ
Sbjct: 337 FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ 396
Query: 361 IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVADLAGEDT 420
IAHLGD+D+EPEFSSAMPLEEGDTFFF PRPL+NLVLVDE+DSLSPIL C +ADLA EDT
Sbjct: 397 IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT 456
Query: 421 PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSYIIVSFVN 480
PQ+Y+ACGRGPRSSLR LRHGLEV+EMAVSELPG+PNAVWTVRR+ ++E+D+YIIVSFVN
Sbjct: 457 PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN 516
Query: 481 ATLVLSIGETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKRVNEWKAPG 540
ATLVLSIGETVEEVTDSGFLGTTPTLSC +G+DALVQVYPDGIRHIRADKRVNEWK PG
Sbjct: 517 ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG 576
Query: 541 KKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCMALGSVAAGEQ 600
KK+IV+CAVNQRQVVIALTGGELVYFEMDP+GQLNEYTERK++S+DV CM+L +V GEQ
Sbjct: 577 KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ 636
Query: 601 RAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIE--------QPFESGAK 652
R+ FLAVGL DNTVRIISLDP+DCL P SMQALPA ESLCI+E + E G+
Sbjct: 637 RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI 696
Query: 653 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTW 712
L+LNIGL NGVLLRT LD V+GDL+DTRTRYLGSRPVKLF+VR+Q EAVLA+SSR+W
Sbjct: 697 GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW 756
Query: 713 LGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFVP 772
L Y YQ+RFHLTPLSYE LE+A+GF+SEQC EGIVAIS+NTLRILALEKLGAVFNQ P
Sbjct: 757 LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP 816
Query: 773 LEYTPRKFIINSDNNHIIVLETDHNAYTEEMKKHRRIQMAQEMREXXXXXXPEEQQLANE 832
L+YTPRKF+I+ ++N++I++ETDHNAYTE K R+ QMA+EM E +E++LA E
Sbjct: 817 LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE---AAGEDERELAAE 873
Query: 833 MADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGGGQPNTLFRLPLEQNEAAVSLCI 892
MA AFL++ LPE IF +PKAG G WAS+IRV++ Q NTL + LEQNEAA S+ +
Sbjct: 874 MAAAFLNENLPESIFGAPKAGNGQWASVIRVMN----PIQGNTLDLVQLEQNEAAFSVAV 929
Query: 893 VRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVHKTPVDEYPGA 952
R++ E +++VGVAKDLIL+PRS G ++ YK+ N KLE +HKTPV+E P A
Sbjct: 930 CRFSNTGE--DWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAA 987
Query: 953 IAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVSDVQESVFC 1012
IA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N I+ I+TIG R+ VSDVQES
Sbjct: 988 IAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIW 1047
Query: 1013 VKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPT 1072
V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++RLP + +D+VDEDPT
Sbjct: 1048 VRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1107
Query: 1073 GNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLP 1132
GNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+P
Sbjct: 1108 GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVP 1167
Query: 1133 FTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQK 1192
FTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFNS++P KQK
Sbjct: 1168 FTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQK 1227
Query: 1193 AIAGDLERTPAEVSKKLEDIRTRYAF 1218
++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 1228 NVSEELDRTPPEVSKKLEDIRTRYAF 1253
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 1985 bits (4923), Expect = 0.0
Identities = 931/1226 (75%), Positives = 1080/1226 (88%), Gaps = 17/1226 (1%)
Query: 1 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFG 60
M+LYNLTLQ ++ I+ A+HGNFSGTKQQEI++SRGK LELLRPDPNTGKVHT + +E+FG
Sbjct: 1 MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60
Query: 61 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 120
V+RS+MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN+ EK+HQETFGKSGCRRIVPGQ+
Sbjct: 61 VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120
Query: 121 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180
L++DPKGRAVMI AIEKQKLVYILNRDA ARLTISSPLEAHK+NTLVYH+VGVDVGFENP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180
Query: 181 MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG 240
MFACLE+DYEEAD+DPTGEAA TQQTLTFYELDLGLNHVVRKYSEPLEEH NFLITVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240
Query: 241 GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 300
G+DGPSGVLICSENY+TYKN GDQ DIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 300
Query: 301 FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ 360
LAQTEQGDIFKIT+ETDEDMVTEI+LKYFDTVPVA +MCVLKTGFLFVA EFGNHYLYQ
Sbjct: 301 SLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ 360
Query: 361 IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVADLAGEDT 420
IAHLGD+D+EPEFSSAMPLEEGDTFFF PRPL+NLVLVDE+DSLSPIL C +ADLA EDT
Sbjct: 361 IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT 420
Query: 421 PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSYIIVSFVN 480
PQ+Y+ACGRGPRSSLR LRHGLEV+EMAVSELPG+PNAVWTVRR+ ++E+D+YIIVSFVN
Sbjct: 421 PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN 480
Query: 481 ATLVLSIGETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKRVNEWKAPG 540
ATLVLSIGETVEEVTDSGFLGTTPTLSC +G+DALVQVYPDGIRHIRADKRVNEWK PG
Sbjct: 481 ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG 540
Query: 541 KKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCMALGSVAAGEQ 600
KK+IV+CAVNQRQVVIALTGGELVYFEMDP+GQLNEYTERK++S+DV CM+L +V GEQ
Sbjct: 541 KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ 600
Query: 601 RAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIE--------QPFESGAK 652
R+ FLAVGL DNTVRIISLDP+DCL P SMQALPA ESLCI+E + E G+
Sbjct: 601 RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI 660
Query: 653 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTW 712
L+LNIGL NGVLLRT LD V+GDL+DTRTRYLGSRPVKLF+VR+Q EAVLA+SSR+W
Sbjct: 661 GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW 720
Query: 713 LGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFVP 772
L Y YQ+RFHLTPLSYE LE+A+GF+SEQC EGIVAIS+NTLRILALEKLGAVFNQ P
Sbjct: 721 LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP 780
Query: 773 LEYTPRKFIINSDNNHIIVLETDHNAYTEEMKKHRRIQMAQEMREXXXXXXPEEQQLANE 832
L+YTPRKF+I+ ++N++I++ETDHNAYTE K R+ QMA+EM E +E++LA E
Sbjct: 781 LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE---AAGEDERELAAE 837
Query: 833 MADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGGGQPNTLFRLPLEQNEAAVSLCI 892
MA AFL++ LPE IF +PKAG G WAS+IRV++ Q NTL + LEQNEAA S+ +
Sbjct: 838 MAAAFLNENLPESIFGAPKAGNGQWASVIRVMN----PIQGNTLDLVQLEQNEAAFSVAV 893
Query: 893 VRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVHKTPVDEYPGA 952
R++ E +++VGVAKDLIL+PRS G ++ YK+ N KLE +HKTPV+E P A
Sbjct: 894 CRFSNTGE--DWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAA 951
Query: 953 IAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVSDVQESVFC 1012
IA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N I+ I+TIG R+ VSDVQES
Sbjct: 952 IAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIW 1011
Query: 1013 VKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPT 1072
V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++RLP + +D+VDEDPT
Sbjct: 1012 VRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1071
Query: 1073 GNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLP 1132
GNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+P
Sbjct: 1072 GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVP 1131
Query: 1133 FTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQK 1192
FTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFNS++P KQK
Sbjct: 1132 FTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQK 1191
Query: 1193 AIAGDLERTPAEVSKKLEDIRTRYAF 1218
++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 1192 NVSEELDRTPPEVSKKLEDIRTRYAF 1217
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 1983 bits (4918), Expect = 0.0
Identities = 930/1226 (75%), Positives = 1079/1226 (88%), Gaps = 17/1226 (1%)
Query: 1 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFG 60
M+LYNLTLQ ++ I+ A+HGNFSGTKQQEI++SRGK LELLRPDPNTGKVHT + +E+FG
Sbjct: 1 MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60
Query: 61 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 120
V+RS+MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN+ EK+HQETFGKSGCRRIVPGQ+
Sbjct: 61 VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120
Query: 121 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180
L++DPKGRAVMI AIEKQKLVYILNRDA ARLTISSPLEAHK+NTLVYH+VGVDVGFENP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180
Query: 181 MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG 240
MFACLE+DYEEA +DPTGEAA TQQTLTFYELDLGLNHVVRKYSEPLEEH NFLITVPG
Sbjct: 181 MFACLEMDYEEAGNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240
Query: 241 GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 300
G+DGPSGVLICSENY+TYKN GDQ DIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
Sbjct: 241 GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF 300
Query: 301 FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ 360
F AQTEQGDIFKIT+ETDEDMVTEI+LKYFDTVPVA +MCVLKTGFLFVA EFGNHYLYQ
Sbjct: 301 FWAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ 360
Query: 361 IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVADLAGEDT 420
IAHLGD+D+EPEFSSAMPLEEGDTFFF PRPL+NLVLVDE+DSLSPIL C +ADLA EDT
Sbjct: 361 IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT 420
Query: 421 PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSYIIVSFVN 480
PQ+Y+ACGRGPRSSLR LRHGLEV+EMAVSELPG+PNAVWTVRR+ ++E+D+YIIVSFVN
Sbjct: 421 PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN 480
Query: 481 ATLVLSIGETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKRVNEWKAPG 540
ATLVLSIGETVEEVTDSGFLGTTPTLSC +G+DALVQVYPDGIRHIRADKRVNEWK PG
Sbjct: 481 ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG 540
Query: 541 KKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCMALGSVAAGEQ 600
KK+IV+CAVNQRQVVIALTGGELVYFEMDP+GQLNEYTERK++S+DV CM+L +V GEQ
Sbjct: 541 KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ 600
Query: 601 RAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIE--------QPFESGAK 652
R+ FLAVGL DNTVRIISLDP+DCL P SMQALPA ESLCI+E + E G+
Sbjct: 601 RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI 660
Query: 653 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTW 712
L+LNIGL NGVLLRT LD V+GDL+DTRTRYLGSRPVKLF+VR+Q EAVLA+SSR+W
Sbjct: 661 GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW 720
Query: 713 LGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTFVP 772
L Y YQ+RFHLTPLSYE LE+A+GF+SEQC EGIVAIS+NTLRILALEKLGAVFNQ P
Sbjct: 721 LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP 780
Query: 773 LEYTPRKFIINSDNNHIIVLETDHNAYTEEMKKHRRIQMAQEMREXXXXXXPEEQQLANE 832
L+YTPRKF+I+ ++N++I++ETDHNAYTE K R+ QMA+EM E +E++LA E
Sbjct: 781 LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE---AAGEDERELAAE 837
Query: 833 MADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGGGQPNTLFRLPLEQNEAAVSLCI 892
MA AFL++ LPE IF +PKAG G WAS+IRV++ Q NTL + LEQNEAA S+ +
Sbjct: 838 MAAAFLNENLPESIFGAPKAGNGQWASVIRVMN----PIQGNTLDLVQLEQNEAAFSVAV 893
Query: 893 VRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVHKTPVDEYPGA 952
R++ E +++VGVAKDLIL+PRS G ++ YK+ N KLE +HKTPV+E P A
Sbjct: 894 CRFSNTGE--DWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAA 951
Query: 953 IAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVSDVQESVFC 1012
IA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N I+ I+TIG R+ VSDVQES
Sbjct: 952 IAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIW 1011
Query: 1013 VKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQSVSDDVDEDPT 1072
V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++RLP + +D+VDEDPT
Sbjct: 1012 VRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1071
Query: 1073 GNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLP 1132
GNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+P
Sbjct: 1072 GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVP 1131
Query: 1133 FTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQK 1192
FTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+PVKNVIDGDLCEQFNS++P KQK
Sbjct: 1132 FTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQK 1191
Query: 1193 AIAGDLERTPAEVSKKLEDIRTRYAF 1218
++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 1192 NVSEELDRTPPEVSKKLEDIRTRYAF 1217
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 558 bits (1378), Expect = e-158
Identities = 261/408 (63%), Positives = 331/408 (81%), Gaps = 9/408 (2%)
Query: 811 MAQEMREXXXXXXPEEQQLANEMADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGG 870
MA+EM E +E++LA EMA AFL++ LPE IF +PKAG G WAS+IRV++ G
Sbjct: 1 MAEEMVEAAGE---DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQG- 56
Query: 871 GQPNTLFRLPLEQNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYK 930
NTL + LEQNEAA S+ + R++ E +++VGVAKDLIL+PRS G ++ YK
Sbjct: 57 ---NTLDLVQLEQNEAAFSVAVCRFSNTGEDW--YVLVGVAKDLILNPRSVAGGFVYTYK 111
Query: 931 IYGNTGKLELVHKTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNL 990
+ N KLE +HKTPV+E P AIA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N
Sbjct: 112 LVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANY 171
Query: 991 IADIKTIGQRIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDK 1050
I+ I+TIG R+ VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DK
Sbjct: 172 ISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADK 231
Query: 1051 FGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATL 1110
FGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TL
Sbjct: 232 FGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTL 291
Query: 1111 IPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYP 1170
IPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+P
Sbjct: 292 IPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFP 351
Query: 1171 VKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDIRTRYAF 1218
VKNVIDGDLCEQFNS++P KQK ++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 352 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF 399
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 558 bits (1377), Expect = e-158
Identities = 261/408 (63%), Positives = 331/408 (81%), Gaps = 9/408 (2%)
Query: 811 MAQEMREXXXXXXPEEQQLANEMADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGG 870
MA+EM E +E++LA EMA AFL++ LPE IF +PKAG G WAS+IRV++ G
Sbjct: 1 MAEEMVEAAGE---DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQG- 56
Query: 871 GQPNTLFRLPLEQNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYK 930
NTL + LEQNEAA S+ + R++ E +++VGVAKDLIL+PRS G ++ YK
Sbjct: 57 ---NTLDLVQLEQNEAAFSVAVCRFSNIGEDW--YVLVGVAKDLILNPRSVAGGFVYTYK 111
Query: 931 IYGNTGKLELVHKTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNL 990
+ N KLE +HKTPV+E P AIA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N
Sbjct: 112 LVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANY 171
Query: 991 IADIKTIGQRIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDK 1050
I+ I+TIG R+ VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DK
Sbjct: 172 ISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADK 231
Query: 1051 FGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATL 1110
FGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TL
Sbjct: 232 FGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTL 291
Query: 1111 IPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYP 1170
IPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+P
Sbjct: 292 IPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFP 351
Query: 1171 VKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDIRTRYAF 1218
VKNVIDGDLCEQFNS++P KQK ++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 352 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF 399
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 558 bits (1377), Expect = e-158
Identities = 261/408 (63%), Positives = 331/408 (81%), Gaps = 9/408 (2%)
Query: 811 MAQEMREXXXXXXPEEQQLANEMADAFLSDTLPEYIFSSPKAGAGMWASLIRVVDMGIGG 870
MA+EM E +E++LA EMA AFL++ LPE IF +PKAG G WAS+IRV++ G
Sbjct: 1 MAEEMVEAAGE---DERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQG- 56
Query: 871 GQPNTLFRLPLEQNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYK 930
NTL + LEQNEAA S+ + R++ E +++VGVAKDLIL+PRS G ++ YK
Sbjct: 57 ---NTLDLVQLEQNEAAFSVAVCRFSNIGEDW--YVLVGVAKDLILNPRSVAGGFVYTYK 111
Query: 931 IYGNTGKLELVHKTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNL 990
+ N KLE +HKTPV+E P AIA F GR+L GVG++LR+YD+G++KLLRKCEN+HI N
Sbjct: 112 LVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANY 171
Query: 991 IADIKTIGQRIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDK 1050
I+ I+TIG R+ VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DK
Sbjct: 172 ISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADK 231
Query: 1051 FGNVAIMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATL 1110
FGN+ ++RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+ TL
Sbjct: 232 FGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTL 291
Query: 1111 IPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYYYP 1170
IPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY+P
Sbjct: 292 IPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFP 351
Query: 1171 VKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDIRTRYAF 1218
VKNVIDGDLCEQFNS++P KQK ++ +L+RTP EVSKKLEDIRTRYAF
Sbjct: 352 VKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF 399
>BC009780-1|AAH09780.1| 275|Homo sapiens SF3B3 protein protein.
Length = 275
Score = 464 bits (1145), Expect = e-130
Identities = 212/249 (85%), Positives = 236/249 (94%)
Query: 1 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFG 60
M+LYNLTLQ ++ I+ A+HGNFSGTKQQEI++SRGK LELLRPDPNTGKVHT + +E+FG
Sbjct: 1 MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG 60
Query: 61 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 120
V+RS+MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN+ EK+HQETFGKSGCRRIVPGQ+
Sbjct: 61 VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF 120
Query: 121 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP 180
L++DPKGRAVMI AIEKQKLVYILNRDA ARLTISSPLEAHK+NTLVYH+VGVDVGFENP
Sbjct: 121 LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP 180
Query: 181 MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG 240
MFACLE+DYEEAD+DPTGEAA TQQTLTFYELDLGLNHVVRKYSEPLEEH NFLITVPG
Sbjct: 181 MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG 240
Query: 241 GNDGPSGVL 249
G+DGPSGVL
Sbjct: 241 GSDGPSGVL 249
>U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1
protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA
binding protein 1, 127kDa protein.
Length = 1140
Score = 149 bits (360), Expect = 8e-35
Identities = 185/792 (23%), Positives = 344/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 85.8 bits (203), Expect = 8e-16
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K LR E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum
Group E Complementing protein protein.
Length = 1140
Score = 147 bits (357), Expect = 2e-34
Identities = 185/792 (23%), Positives = 343/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E D
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETDDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + + +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTGMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 83.8 bits (198), Expect = 3e-15
Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K +R E H N++A +KT G I
Sbjct: 863 EKEVKGDVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding
factor protein.
Length = 1140
Score = 145 bits (351), Expect = 1e-33
Identities = 184/792 (23%), Positives = 343/792 (43%), Gaps = 85/792 (10%)
Query: 2 YLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTFMKIEIFGV 61
Y Y +T Q +A+ V G+F+ + ++I++ LE+ + ++ ++G
Sbjct: 3 YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG--LRPVKEVGMYGK 60
Query: 62 VRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTK---NILEKVHQETFGKSGCRRIVPG 118
+ + FR G +KD + + + ILEY + +I+ + H + G R G
Sbjct: 61 IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIG-RPSETG 119
Query: 119 QYLSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFE 178
IDP+ R + + + V L+RD + L+A H++ DV F
Sbjct: 120 IIGIIDPECRMIGLRLYDGLFKVIPLDRD-------NKELKAFNIRLEELHVI--DVKF- 169
Query: 179 NPMFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITV 238
++ C DP G + + +L E + G E +E A+ +I V
Sbjct: 170 --LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKG-----PWKQENVEAEASMVIAV 222
Query: 239 PGGNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSM 298
P + G +I + +TY N GD++ P +++ + VC
Sbjct: 223 P---EPFGGAIIIGQESITYHN-GDKYLAIAPPIIKQSTI---------VCHNRVDPNGS 269
Query: 299 FFFLAQTEQGDIFKITIETDEDM-----VTEIKLKYFDTVPVATSMCVLKTGFLFVACEF 353
+ L E G +F + +E +E M + +++++ +A + L G +FV
Sbjct: 270 RYLLGDME-GRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRL 328
Query: 354 GNHYLYQIAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPILACHVA 413
G+ L ++ D +++ + AM +TF +L PI+ V
Sbjct: 329 GDSQLVKLNV--DSNEQGSYVVAM-----ETF----------------TNLGPIVDMCVV 365
Query: 414 DLAGEDTPQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRNKDEEYDSY 473
DL + Q+ G SLR +R+G+ + E A +LPG +W +R + + E
Sbjct: 366 DLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGI-KGLWPLRSDPNRETYDT 424
Query: 474 IIVSFVNATLVLSI-GETVEEVTDSGFLGTTPTLSCHAMGNDALVQVYPDGIRHIRADKR 532
+++SFV T VL + GE VEE GF+ T C + + L+Q+ +R + + +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPK 484
Query: 533 --VNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVCCM 590
V+EWK P K+I + N QVV+A+ G L Y ++ P +L + + ++ +V C+
Sbjct: 485 ALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQIS-HTEMEHEVACL 541
Query: 591 ALGSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPF 647
+ + + A+GL D + RI+ L + L + G E + I+ F
Sbjct: 542 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTF 596
Query: 648 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 707
E S+ +L L +G L L+ +G L+D + LG++P L R + V A
Sbjct: 597 E----SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 652
Query: 708 SSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFN 767
S R + Y ++ + ++ + + Y +S+ + + +++TL I ++++ +
Sbjct: 653 SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHI 712
Query: 768 QTFVPLEYTPRK 779
+T VPL +PRK
Sbjct: 713 RT-VPLYESPRK 723
Score = 84.2 bits (199), Expect = 3e-15
Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 24/323 (7%)
Query: 883 QNEAAVSLCIVRWAAHAEHAQPHLVVGVAKDLILSPRSCTEGSLHVYKIYGNTGKLELVH 942
QNE A+SL + + + +VG A ++ P + + GKL+ V
Sbjct: 809 QNEYALSLVSCKLG---KDPNTYFIVGTA---MVYPEEAEPKQGRIVVFQYSDGKLQTVA 862
Query: 943 KTPVDEYPGAIAAFNGRLLAGVGRMLRLYDIGRRKLLRKCENRHIPNLIA-DIKTIGQRI 1001
+ V ++ FNG+LLA + +RLY+ K +R E H N++A +KT G I
Sbjct: 863 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKTKGDFI 921
Query: 1002 FVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 1061
V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 922 LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981
Query: 1062 SVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYA 1121
+ + D + L+ G G +V+ ++GET T Q GS +L+
Sbjct: 982 AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQ-NLGETSTPTQ-------GS--VLFG 1031
Query: 1122 TISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY-----YPVKNVID 1176
T++G +G L+ S ++ ++ + + +H +RS++ P ID
Sbjct: 1032 TVNGMIG-LVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFID 1090
Query: 1177 GDLCEQFNSLDPGKQKAIAGDLE 1199
GDL E F + K + + +L+
Sbjct: 1091 GDLIESFLDISRPKMQEVVANLQ 1113
>U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylation
specificity factor protein.
Length = 1442
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 461 TVRRNKDEEYDSYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCHAMG-NDALVQV 519
T + D ++I+S ++T++L G+ + E+ SGF PT+ +G N +VQV
Sbjct: 562 TPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQV 621
Query: 520 YPDGIRHIRADKRVNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYF 566
P GIR + +++ IV+CAV VVI G + F
Sbjct: 622 SPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMF 668
>BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and
polyadenylation specific factor 1, 160kDa protein.
Length = 1443
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 461 TVRRNKDEEYDSYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCHAMG-NDALVQV 519
T + D ++I+S ++T++L G+ + E+ SGF PT+ +G N +VQV
Sbjct: 562 TPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQV 621
Query: 520 YPDGIRHIRADKRVNEWKAPGKKSIVRCAVNQRQVVIALTGGELVYF 566
P GIR + +++ IV+CAV VVI G + F
Sbjct: 622 SPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMF 668
>BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein.
Length = 283
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1106 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 1145
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prostate
protein 2 variant 2 protein.
Length = 494
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1106 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 1145
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prostate
protein 2 variant 1 protein.
Length = 459
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1106 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 1145
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,095,459
Number of Sequences: 224733
Number of extensions: 8075272
Number of successful extensions: 12836
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12710
Number of HSP's gapped (non-prelim): 59
length of query: 1218
length of database: 73,234,838
effective HSP length: 98
effective length of query: 1120
effective length of database: 51,211,004
effective search space: 57356324480
effective search space used: 57356324480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 71 (32.7 bits)
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