Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000828-TA|BGIBMGA000828-PA|IPR008994|Nucleic
acid-binding, OB-fold, IPR001208|MCM, IPR008049|MCM protein 6
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 609 e-175
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 312 1e-85
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 300 5e-82
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 275 1e-74
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 274 4e-74
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 248 2e-66
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 30 1.1
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 30 1.1
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 29 1.9
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 29 3.4
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 4.4
SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 5.9
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 27 7.7
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 27 7.7
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 609 bits (1505), Expect = e-175
Identities = 347/836 (41%), Positives = 502/836 (60%), Gaps = 63/836 (7%)
Query: 12 QVKDEVGIRCQKLFQDFLEEFKEDN------------EIKYEKHAKELLKPELSTLEVSF 59
+V D G ++ F++FL F +D E Y + L E+ T+ V +
Sbjct: 63 KVIDTTGESVREAFEEFLLSFSDDRVAGGDALPSASQEKYYVQQIHGLAMYEIHTVYVDY 122
Query: 60 DDVEKYNQNLATTIIEEYYRIYPFLNRAILNYI-----------LSLAETGMKKDLQ--D 106
+ YN LA I+E+YYR PFL RA+ I LS + + + D
Sbjct: 123 KHLTSYNDVLALAIVEQYYRFSPFLLRALQKLIEKFEPEYYRSSLSRENASLSPNFKASD 182
Query: 107 KECYVSFVDVPTRHKVRELTTAKIGTLIRISGQIVRTHPVHPELVQGTF----------- 155
K ++F ++P R +R+L T +IG L I+G + RT V PEL QGTF
Sbjct: 183 KTFALAFYNLPFRSTIRDLRTDRIGRLTTITGTVTRTSEVRPELAQGTFICEECHTVVSN 242
Query: 156 ------YTIPTICRNPVCANRRRFMLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVI 209
YT PT C N +CAN+R + L+ +S F D+QK+RIQE E+P G +PR+L+VI
Sbjct: 243 VEQAFRYTEPTQCPNELCANKRSWRLNISQSSFQDWQKVRIQENSNEIPTGSMPRTLDVI 302
Query: 210 LRAEAVESVQAGDRYDFTGTLIVVPDVGALSMPGSRAEITTRTKLANEGQMEGIKGLKAL 269
LR + VE +AGD+ FTG LI VPDV L +PG + E ++ +G+ GLK+L
Sbjct: 303 LRGDIVERAKAGDKCAFTGILIAVPDVSQLGIPGVKPEAYRDSRNFGGRDADGVTGLKSL 362
Query: 270 GVRELHYKTAFLACSVQAVSRRFGTAELPTHDLTT-----EDMRKQMTDKEWDKVYEMSR 324
GVR+L YK +FLAC VQ + D + ++ + ++ +E D + M
Sbjct: 363 GVRDLTYKLSFLACMVQPDDANDKSGADVRGDGSQGIEEQDEFLQSLSQEEIDDLRAMVH 422
Query: 325 DRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAK 384
++Y+ L SL PS++G+ +K+G+LL L GGV K T EG LRGD+N+CIVGDPST+K
Sbjct: 423 SDHIYSRLTNSLAPSVYGHEIIKKGILLQLMGGVHKLTPEGINLRGDLNICIVGDPSTSK 482
Query: 385 SQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEF 444
SQ LK V PRA+YTSGKASSAAGLTAAVV+DEE+ DF IEAGALMLADNG+C IDEF
Sbjct: 483 SQFLKYVCNFLPRAIYTSGKASSAAGLTAAVVKDEETGDFTIEAGALMLADNGICAIDEF 542
Query: 445 DKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVAL 504
DKMD DQVAIHEAMEQQTIS+AKAG++ATLNARTSILAAANPIGGRY+R +L+ N+ +
Sbjct: 543 DKMDLSDQVAIHEAMEQQTISIAKAGIQATLNARTSILAAANPIGGRYNRKTTLRNNINM 602
Query: 505 SPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKEESYDCVYSRDDLLRYIAFARSF 564
S PIMSRFDLFF+++DE +E VD +A+ IVD+H ++++ +S + L RYI +AR+F
Sbjct: 603 SAPIMSRFDLFFVVLDECNESVDRHLAKHIVDIHRLRDDAMQPEFSTEQLQRYIRYARTF 662
Query: 565 KPVI-TEEAGKLLVEYYXXXXXXXXXXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTP 623
KP + TE +++ +Y +RITVRQLESM+RL+E +A+ +C +TP
Sbjct: 663 KPKLNTESCAEIVKKYKQLRMDDAQGAGKNSYRITVRQLESMIRLSEAIARANCVDDITP 722
Query: 624 AHVHEAYRLLNKSIIRVEQPDIHLDEDEPQCEPSMDVDQDEPNGTAETPSNGDSAPKKKL 683
A V+EAY LL +SII VE+ DI ++ED+ + + + + + NG + S+ ++ K K+
Sbjct: 723 AFVNEAYSLLRQSIIHVERDDIEVEEDDAEAQELENDNTNTTNGN-DNVSSEEALQKPKV 781
Query: 684 ALSFEEYKSLSNMLVVYMRKXXXXXXXXXXXSSGMHKSAVVSWYLEQLVAQGQIESEDEL 743
+++++Y S+ N ++ +R+ G+ +V YLE + + Q +E+++
Sbjct: 782 KITYDKYVSIMNGILQVLRQRSTEGV------DGVPAGDLVQSYLE--LREDQFHTEEDI 833
Query: 744 LERKTLVEKVIDRLMYHDQVIIPLSTTGLRGTQKSSEQDIEDDPLLVVHPNYVVDA 799
+ LV KV+ RL+ H+ +I+ + T + E + + +HPN +DA
Sbjct: 834 IYEVGLVRKVLTRLV-HESIIMEIQNL----TDSAVRLPFE-ERVFSIHPNCDIDA 883
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 312 bits (767), Expect = 1e-85
Identities = 230/674 (34%), Positives = 341/674 (50%), Gaps = 78/674 (11%)
Query: 22 QKLFQDFLEEFKEDNEIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEYYRIY 81
+K F F+EEF DN+ Y ++ L + L + + YN++LA ++ + I
Sbjct: 31 EKNFIQFIEEFVIDNDFIYRTQLRDNLVVKQYMLNIDLRHLISYNEDLAHLLLSQPTDIL 90
Query: 82 PFLNRAILNYILSLAETGMKKDLQD-KECYVSFVDVPTRHKVRELTTAKIGTLIRISGQI 140
P A+ L + + C V+ +R LT + I L+R+ G I
Sbjct: 91 PLFESAVTTVAKRLLYRSQENASTNIPTCQVTLRYDANILPIRNLTASHISKLVRVPGII 150
Query: 141 V-------RTHPVH--------PELVQ--GTF--YTIPTICRNPVCANRRR------FML 175
+ R +H ++Q G F +P +C PV ++ F++
Sbjct: 151 IGASTLSCRATALHLVCRNCRATRILQISGGFSGVQLPRVCEAPVLDGEKKDCPMDPFII 210
Query: 176 DADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIVVPD 235
D KS F+D Q +++QE +P G +PR ++L A DRY T +
Sbjct: 211 DHSKSTFIDQQVLKLQEAPDMVPVGELPR--HILLNA---------DRY-LTNQIT---- 254
Query: 236 VGALSMPGSRAEITTRTKLANEGQMEGIKGLKALGVRELHYKTAFLACSVQAVSRRFGTA 295
PG+R IT + Q + +K A+ +R + + +Q S G+
Sbjct: 255 ------PGTRCVITGIFSIF---QNKSVKASGAVAIRNPYIRVV----GIQMDSND-GSK 300
Query: 296 ELPTHDLTTEDMRKQMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLF 355
P +++E ++ E+SR NLY+ + S+ P+I+GN ++K+ + +LF
Sbjct: 301 STPL-----------FSEEEEEEFLEISRTPNLYDIISNSISPAIYGNVDIKKAIACLLF 349
Query: 356 GGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAV 415
G K +G LRGDINV ++GDP TAKSQ LK V + P AVYTSGK SSAAGLTA++
Sbjct: 350 SGSKKILPDGMRLRGDINVLLLGDPGTAKSQFLKFVERLAPIAVYTSGKGSSAAGLTASI 409
Query: 416 VRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATL 475
RD + +F +E GA++LAD G+ CIDEFDKM D+VAIHEAMEQQTIS+AKAG+ L
Sbjct: 410 QRDSVTREFYLEGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTIL 469
Query: 476 NARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIV 535
N+RTS+LAAANPI GRYD K+ +N+ I+SRFD+ FI+ DE E D IAR ++
Sbjct: 470 NSRTSVLAAANPIFGRYDDMKTPGENIDFQSTILSRFDMIFIVKDEHDETKDRNIARHVI 529
Query: 536 DLHCNKEESYDCV----YSRDDLLRYIAFAR-SFKPVITEEAG-KLLVEYYXXXXXXXXX 589
+LH N +ES + + D RYI + R P + EA KL ++
Sbjct: 530 NLHTNLQESSETLAIGEIPFDKFRRYINYCRHKCAPNLDAEAAEKLSSQFVAIRKRVHQS 589
Query: 590 XXXXXWR----ITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRL-LNKSIIRVEQPD 644
R ITVRQLE+++R+ E +AKM S + AH EA RL L ++ Q
Sbjct: 590 EQDSNSRSTIPITVRQLEAIIRITESLAKMSLSPIASEAHATEAIRLFLTSTLAAATQSS 649
Query: 645 IHLDEDEPQCEPSM 658
+ E+ + E S+
Sbjct: 650 PEVTEEVKKIEASL 663
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 300 bits (736), Expect = 5e-82
Identities = 215/613 (35%), Positives = 323/613 (52%), Gaps = 44/613 (7%)
Query: 52 LSTLEVSFDDVEKY--NQNLATTIIEEYYRIYPFLNRAILNYILSLAETGMKKD-LQDKE 108
L L + D++ Y + L + I P +++ I + +L L T +D L D E
Sbjct: 215 LEILNLDVQDLKHYPPTKKLYHQLYSYPQEIIPIMDQTIKDVMLDLLGTNPPEDVLNDIE 274
Query: 109 CYVSFVDVPTRHK---VRELTTAKIGTLIRISGQIVRTHPVHPELVQGTFYTIPTICRNP 165
+ + K +R+L I LI I G ++R PV P++ Q F ++C +
Sbjct: 275 LKIYKIRPFNLEKCINMRDLNPGDIDKLISIKGLVLRCTPVIPDMKQAFFRC--SVCGHC 332
Query: 166 VCA--NRRRFM--LDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAG 221
V +R R + + V +++ ++E +VI E + V G
Sbjct: 333 VTVEIDRGRIAEPIKCPREVCGATNAMQLIHNRSEFA------DKQVIKLQETPDVVPDG 386
Query: 222 DRYDFTGTLIVVPDVGALSMPGSRAEITTRTKLAN---EGQMEGIKGLKALGVRELHYKT 278
+ +L V ++ + G R E+T + +M +K L V +H K
Sbjct: 387 QT-PHSVSLCVYDELVDSARAGDRIEVTGIFRCVPVRLNPRMRTVKSLFKTYVDVVHIK- 444
Query: 279 AFLACSVQAVSRRFGTAELPTHDLTTEDMRKQM------TDKEWDKVYEMSRDRNLYNNL 332
+ RR GT ED Q+ +D+E +K+ ++S+ ++Y+ L
Sbjct: 445 -------KQDKRRLGTDPSTLESDIAEDAALQIDEVRKISDEEVEKIQQVSKRDDIYDIL 497
Query: 333 ITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTT--LRGDINVCIVGDPSTAKSQLLKQ 390
SL PSI+ ++VK+G+LL LFGG K+ +G + RGDIN+ + GDPST+KSQ+LK
Sbjct: 498 SRSLAPSIYEMDDVKKGLLLQLFGGTNKSFHKGASPRYRGDINILMCGDPSTSKSQILKY 557
Query: 391 VSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPG 450
V +I PR VYTSGK SSA GLTA + RD+++ V+E+GAL+L+D G+CCIDEFDKM
Sbjct: 558 VHKIAPRGVYTSGKGSSAVGLTAYITRDQDTKQLVLESGALVLSDGGICCIDEFDKMSDA 617
Query: 451 DQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMS 510
+ +HE MEQQT+++AKAG+ TLNARTSILA+ANPIG +Y+ + +N+ L P ++S
Sbjct: 618 TRSILHEVMEQQTVTVAKAGIITTLNARTSILASANPIGSKYNPDLPVTKNIDLPPTLLS 677
Query: 511 RFDLFFILIDESSEMVDYAIARKIVDLHC--NKEESYDC-VYSRDDLLRYIAFAR-SFKP 566
RFDL ++++D E +D +A IV ++ E + D V+S + L YI +AR + P
Sbjct: 678 RFDLVYLILDRVDETLDRKLANHIVSMYMEDTPEHATDMEVFSVEFLTSYITYARNNINP 737
Query: 567 VITEEAGKLLVEYYXXXXXXXXXXXXXXWRI--TVRQLESMVRLAEGVAKMHCSGHVTPA 624
VI+EEA K LV Y RI T RQLESM+RL+E AKMH V
Sbjct: 738 VISEEAAKELVNAYVGMRKLGEDVRASEKRITATTRQLESMIRLSEAHAKMHLRNVVEVG 797
Query: 625 HVHEAYRLLNKSI 637
V EA RL+ +I
Sbjct: 798 DVLEAARLIKTAI 810
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 275 bits (675), Expect = 1e-74
Identities = 190/549 (34%), Positives = 289/549 (52%), Gaps = 64/549 (11%)
Query: 15 DEVGIRCQKLFQDFLEEFKED-NEIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLAT-T 72
DEV ++FQ++LE +D N Y++ +L L V+ D++ YN+ LA
Sbjct: 7 DEVFKDRVRIFQEYLEHDTDDANVTLYQEAILRMLNMGQRRLIVNIDELRDYNRELADGV 66
Query: 73 IIEEYYRIYPFLNRAILNYILSLAETGMKKDLQDKECYVSFVDVPTRHKV--RELTTAKI 130
+++ + PF + A+ N + +L + + KDL+DK YV F H V R L +
Sbjct: 67 LLKPLEYVEPF-DEALRNVVSTLIDPVVHKDLKDKLFYVGFRGSFGDHHVNPRTLRAMHL 125
Query: 131 GTLIRISGQIVRTHPVHPELVQGTF------------YTIPTI-----CRNPVCA----N 169
+I + G + R V P++++ Y T+ ++ V N
Sbjct: 126 NKMISLEGIVTRCSFVRPKVIKSVHYCEATKRHHFKQYADATMNGGLSFQSTVYPTQDEN 185
Query: 170 RRRFMLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGT 229
++ S F D Q I +QE P G +PRS++++L + V++V+
Sbjct: 186 GNPLSIEFGFSTFRDHQSISLQEMPERAPPGQLPRSIDILLDDDLVDTVK---------- 235
Query: 230 LIVVPDVGALSMPGSRAEITTRTKLANEGQMEGIKGLKALGVRELHYKTAFLACSVQAVS 289
PG R I GQ + G K G ++T LA +V +
Sbjct: 236 ------------PGDRVNIV--------GQYRSM-GSKTSGNTSATFRTVLLANNVVLLG 274
Query: 290 RRFGTAELPTHDLTTEDMRKQMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRG 349
+ G + L +TD + + +++R +N++ L TSL PSI+G VK+
Sbjct: 275 NKPGLGNVGGGAL-------DITDADIRNINKLARKKNVFELLSTSLAPSIYGYEYVKQA 327
Query: 350 VLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAA 409
+LL+L GG K GT +RGDIN+ +VGDPSTAKSQLL+ V P A+ T+G+ SS
Sbjct: 328 ILLLLLGGTEKNLTNGTHIRGDINILMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSGV 387
Query: 410 GLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKA 469
GLTAAV D+E+ + +EAGA++LAD GV CIDEFDKM D+VAIHE MEQQT+++AKA
Sbjct: 388 GLTAAVTTDKETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKA 447
Query: 470 GVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYA 529
G+ +LNAR S++AAANPI G+YD K QN+AL ++SRFDL FI+ D+ + D A
Sbjct: 448 GIHTSLNARCSVIAAANPIYGQYDIRKDPHQNIALPDSMLSRFDLLFIVTDDIDDKKDRA 507
Query: 530 IARKIVDLH 538
++ ++ +H
Sbjct: 508 LSEHVLRMH 516
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 274 bits (671), Expect = 4e-74
Identities = 138/323 (42%), Positives = 206/323 (63%), Gaps = 5/323 (1%)
Query: 319 VYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVG 378
+ E+++ N+Y L S+ P I+G+ +VK+ +LL+L GGV K +G +RGDIN+C+ G
Sbjct: 344 IAELNQGGNVYEKLAKSIAPEIYGHEDVKKALLLLLVGGVTKELGDGMRIRGDINICLTG 403
Query: 379 DPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGV 438
DP AKSQLLK +S++ PR VYT+G+ SS GLTAAV+RD + + V+E GAL+LADNG+
Sbjct: 404 DPGVAKSQLLKYISKVAPRGVYTTGRGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGI 463
Query: 439 CCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSL 498
CCIDEFDKMD D+ AIHE MEQQTIS++KAG+ TLNARTSILAAANP+ GRY+ +
Sbjct: 464 CCIDEFDKMDESDRTAIHEVMEQQTISISKAGITTTLNARTSILAAANPLYGRYNPKVAP 523
Query: 499 QQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHC-NKEESYDCVYSRDDLLR- 556
N+ L ++SRFD+ F+++D S D +A+ + +H N++ D +++R
Sbjct: 524 IHNINLPAALLSRFDILFLILDTPSRETDEHLAQHVTYVHMHNEQPKMDFEPLDPNMIRH 583
Query: 557 YIAFARSFKPVITEEAGKLLVEYYXXXXXXXXXXXXXXWRI---TVRQLESMVRLAEGVA 613
YI+ AR ++PV+ ++ + Y + T R L +++R+ + +A
Sbjct: 584 YISSARQYRPVVPKDVCDYVTGAYVQLRQNQKRDEANERQFAHTTPRTLLAILRMGQALA 643
Query: 614 KMHCSGHVTPAHVHEAYRLLNKS 636
++ S V V EA RL++ S
Sbjct: 644 RLRFSNRVEIGDVDEALRLMSVS 666
Score = 52.0 bits (119), Expect = 3e-07
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 122 VRELTTAKIGTLIRISGQIVRTHPVHPELV------------------QGTFYTIPTICR 163
VR+L +G+L+ + G + RT V P L Q TF + C
Sbjct: 170 VRDLRGENLGSLLTVRGIVTRTSDVKPSLTVNAYTCDRCGYEVFQEIRQKTFLPMSE-CP 228
Query: 164 NPVCAN---RRRFMLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQA 220
+ C + + + S F+ FQ+++IQE ++P G IPRSL V L SV
Sbjct: 229 SDECKKNDAKGQLFMSTRASKFLPFQEVKIQELTNQVPIGHIPRSLTVHLYGAITRSVNP 288
Query: 221 GDRYDFTGTLIVVPDVGALSMPGSRAEITTRTKL 254
GD D +G + P G +M RA + T T L
Sbjct: 289 GDIVDISGIFLPTPYTGFRAM---RAGLLTDTYL 319
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 248 bits (607), Expect = 2e-66
Identities = 139/354 (39%), Positives = 209/354 (59%), Gaps = 20/354 (5%)
Query: 310 QMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLR 369
++TD E ++ +++ +++N +I S+ PSI+G+ +K + LFGGV K +R
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAPSIYGHRSIKTAIAAALFGGVPKNINGKHKIR 525
Query: 370 GDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAG 429
GDINV ++GDP TAKSQ LK V + RAV+ +G+ +SA GLTA+V +D + ++ +E G
Sbjct: 526 GDINVLLLGDPGTAKSQFLKYVEKTAHRAVFATGQGASAVGLTASVRKDPITNEWTLEGG 585
Query: 430 ALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIG 489
AL+LAD GVC IDEFDKM+ D+ +IHEAMEQQ+IS++KAG+ TL AR +I+AAANPIG
Sbjct: 586 ALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCTIIAAANPIG 645
Query: 490 GRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKEESYD--- 546
GRY+ QNV L+ PI+SRFD+ ++ D + +D +A +V H ++D
Sbjct: 646 GRYNTTIPFNQNVELTEPILSRFDILQVVKDTVNPEIDEQLANFVVSSHIRSHPAFDPNM 705
Query: 547 CVYSR-------------DDLLR-YIAFAR-SFKPVITEEAGKLLVEYYXXXXXXXXXXX 591
V + DLLR YI FAR P + + + + Y
Sbjct: 706 DVLKKVPTETGIDAKPIPQDLLRKYIHFAREKVFPRLQQMDEEKISRLY--SDMRRESLA 763
Query: 592 XXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDI 645
+ ITVR LES +RL+E AKM S V P+H+ +A +++ S + ++ +
Sbjct: 764 TGSYPITVRHLESAIRLSEAFAKMQLSEFVRPSHIDKAIQVIIDSFVNAQKMSV 817
Score = 67.7 bits (158), Expect = 6e-12
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 25 FQDFLEEFKEDNEIK-YEKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEYYRIYPF 83
F++FL E+ ++N Y + L + +L V++ + + LA + I+
Sbjct: 204 FKNFLLEYTDENGTSVYGNRIRTLGEVNAESLMVNYAHLGESKPILAYFLANAPAPIFRI 263
Query: 84 LNRAILNYILSLAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAKIGTLIRISGQIVRT 143
+R L L L ++ D +V ++PT +R+L + + L+R+SG + R
Sbjct: 264 FDRVALEATL-LHYPDYERIHSD--IHVRITNLPTCFTLRDLRQSHLNCLVRVSGVVTRR 320
Query: 144 HPVHPEL------------VQGTFYTIPTI------CRNPVCANRRRFMLDADKSVFVDF 185
+ P+L G F+ ++ C N C++R F+++++++V+ ++
Sbjct: 321 TGLFPQLKYIRFTCTKCGATLGPFFQDSSVEVKISFCHN--CSSRGPFVINSERTVYNNY 378
Query: 186 QKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTG 228
Q+I +QE+ +P G +PR EVIL A+ V+ + G+ D TG
Sbjct: 379 QRITLQESPGTVPSGRLPRHREVILLADLVDVAKPGEEIDVTG 421
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 598 TVRQLESMVRLAEGVAKMHCSGHVTPAHVHE----AYRLLNK-SIIRVEQPD-----IHL 647
T++++ +++LAE + +MH + H AH E RL++K ++R E+ D HL
Sbjct: 23 TIQKITRILKLAECIDEMHIAKHEIRAHFQEEEFQQIRLMHKRMLLRDEKIDELAKLEHL 82
Query: 648 DEDEPQCEPSMDVDQDEPNGTAETPSNGDSAPKKKLALSFEEYKSLSNML 697
+ + M D+ + N + K+ L EY L+N L
Sbjct: 83 WQKQINSITQMRTKFDKTKSWLSSKRNTLNKSKESLQKDEAEYVELANSL 132
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 22 QKLFQDFLEEFKEDNEIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEYYRIY 81
Q+L D L EF N +K H+ E P L + S+DD+ Y N ++ +Y I
Sbjct: 415 QRLVAD-LHEFY--NSVKGPAHSFETEDPVLKFVSQSYDDLFPYMDNFIQLAVQLFYHIS 471
Query: 82 PFLN 85
+N
Sbjct: 472 KKVN 475
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 117 PTRHKVRELTTAKIGTLIRISGQIVRTHPVHPELVQGTFYTIPTICRNPV 166
P L A+I TL + GQ R + + PE QG +TI + PV
Sbjct: 359 PVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPV 408
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 52 LSTLEVSFDDVEKYNQNLATTIIEEY----YRIYPFLNRAILNYILSLAETGM 100
L TLE ++D E Y +N +++ Y +R++ F +L + E+ +
Sbjct: 695 LRTLENRYEDYESYKENYHLELVDSYDDNSFRVFSFTENERCEKVLKINESSL 747
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 55 LEVSFD-DVEKYNQNLATTIIEEYYRIYPFLNRAILNYILSLAETGMKKDLQDKECYVSF 113
LE+ FD EK N+N + + E ++YPF R + Y S T + LQ ++ +V
Sbjct: 792 LELMFDATAEKNNENSMNSAVFEKSQLYPFTIRHLGAYTASY--TLYVESLQLRKLWVEK 849
Query: 114 VDVPTRHKVREL 125
++V + +++
Sbjct: 850 INVAKKRHSQKI 861
>SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 604 SMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIHLDEDEP 652
++++L EG+ +MH + + + E +R LN +I P L + EP
Sbjct: 49 TILKLNEGIIQMHAIERLDTSFIKEPFRTLNHAINAESLPS--LPDQEP 95
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 628 EAYRLLNKSIIRVEQPDIHLDEDEPQCEPSMDVDQDEPNGTAETPSNGDSAPK 680
E Y +L K+ R+ Q D ++++E + +P +D DE + + D AP+
Sbjct: 265 EIYEVLKKN--RILQIDGTIEDNEDEKKPPVDTPSDEAINSDLDDPDSDEAPE 315
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.5 bits (58), Expect = 7.7
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 341 HGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVY 400
+G +VK VL ++ G + T++G + C+VG P K+ + K ++ R +
Sbjct: 547 YGLKDVKDRVLELVAVGKLRGTMQGKIM------CLVGPPGVGKTSVGKSIASALNREFF 600
Query: 401 TSGKASSAAGLT--AAVVRDEESF-----DFVIEAGALMLADNGVCCIDEFDKMDPGDQ 452
S GLT A + ++ +++A + +N + IDE DK+ Q
Sbjct: 601 ----RFSVGGLTDVAEIKGHRRTYIGAMPGKIVQALKKVQTENPLILIDEIDKVGKSHQ 655
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,327,669
Number of Sequences: 5004
Number of extensions: 135174
Number of successful extensions: 502
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 27
length of query: 799
length of database: 2,362,478
effective HSP length: 78
effective length of query: 721
effective length of database: 1,972,166
effective search space: 1421931686
effective search space used: 1421931686
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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