Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000828-TA|BGIBMGA000828-PA|IPR008994|Nucleic
acid-binding, OB-fold, IPR001208|MCM, IPR008049|MCM protein 6
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 619 e-177
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 286 4e-77
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 246 7e-65
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 230 3e-60
02_05_1080 - 33955034-33955117,33955199-33955300,33955381-339555... 227 2e-59
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 208 1e-53
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 206 4e-53
05_05_0138 + 22644263-22644460,22644617-22644711,22645786-226459... 192 7e-49
05_01_0516 + 4354494-4354575,4354621-4354832 66 1e-10
01_01_1189 + 9454042-9455655 33 0.89
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 31 2.7
11_01_0132 + 1090778-1090903,1091290-1091412 31 2.7
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905... 31 3.6
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 30 6.3
06_03_1476 - 30399317-30399347,30399636-30399722,30400035-304001... 30 6.3
03_02_0879 + 12097602-12098120,12099215-12099254,12099550-120996... 30 6.3
01_06_0998 + 33685051-33685143,33685231-33685322,33685490-336855... 30 8.3
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 619 bits (1528), Expect = e-177
Identities = 349/814 (42%), Positives = 484/814 (59%), Gaps = 39/814 (4%)
Query: 15 DEVGIRCQKLFQDFLEEFKEDN--EIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATT 72
DE R + +F +FL FKE + E YE + + E +T+ V F V ++N L
Sbjct: 10 DEKAARVENIFLEFLRRFKEADAAEAFYETELEAMRSRESTTMYVDFAHVMRFNDVLQKA 69
Query: 73 IIEEYYRIYPFLNRAILNYILSLAETGMKK------DLQDKECYVSFVDVPTRHKVRELT 126
I EEY R P+L A +++ TG + D +K+ ++F ++P ++REL
Sbjct: 70 ISEEYLRFEPYLRNACKRFVME-QRTGENRAPIISDDSPNKDINIAFYNIPMLKRLRELG 128
Query: 127 TAKIGTLIRISGQIVRTHPVHPELVQGTF-----------------YTIPTICRNPVCAN 169
TA+IG L + G + RT V PEL+QGTF YT P IC N C N
Sbjct: 129 TAEIGKLTAVMGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPIICVNATCQN 188
Query: 170 RRRFMLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGT 229
R ++ L +S F D+Q++R+QET E+P G +PRSL+VILR E VE +AGD FTGT
Sbjct: 189 RSKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEKARAGDTVIFTGT 248
Query: 230 LIVVPDVGALSMPGSRAEITTRT--KLANEGQMEGIKGLKALGVRELHYKTAFLACSVQA 287
++ VPDV AL+ PG RAE + G EG+KGLK+LGVR+L Y+ AF+A SVQ
Sbjct: 249 VVAVPDVMALTSPGERAECRREAPQRKNGSGVQEGVKGLKSLGVRDLSYRLAFVANSVQV 308
Query: 288 VSRRFGTAELPTHDLTTEDM-RKQMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEV 346
R ++ D+ +D R++ T++E D+V M + +N ++ S+ P++ G+ E+
Sbjct: 309 ADGR-REVDIRDRDIDGDDSERQKFTEEEEDEVVRMRNVPDFFNKIVDSICPTVFGHQEI 367
Query: 347 KRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKAS 406
KR +LLML GGV K T EG LRGDINVCIVGDPS AKSQ LK + I PR+VYTSGK+S
Sbjct: 368 KRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSS 427
Query: 407 SAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISL 466
SAAGLTA V ++ E+ +F IEAGALMLADNG+CCIDEFDKMD DQVAIHEAMEQQTIS+
Sbjct: 428 SAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISI 487
Query: 467 AKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMV 526
KAG++ATLNARTSILAAANP GGRYD++K L+ NVAL P I+SRFDL +I+IDE E
Sbjct: 488 TKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDEPDENT 547
Query: 527 DYAIARKIVDLHCNKEESYDCVYSRDDLLRYIAFARSFKPVITEEAGKLLVE-YYXXXXX 585
DY IA IV +H +EE+ +S +L RYIAFA+S KP ++ EA K+LVE Y
Sbjct: 548 DYHIAHHIVRVHQKREEALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLVESYVTLRRG 607
Query: 586 XXXXXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDI 645
+R+TVRQLE+++RL+E +A+ H + HV + L+ + ++
Sbjct: 608 DSTPGTRVAYRMTVRQLEALIRLSEAIARSHLERVI--MHVESSEVDLSDFQDADDGTNV 665
Query: 646 HLDEDEPQ-CEPSMDVDQDEPNGTAETPSNGDSAPKKKLALSFEEYKSLSNMLVVYMRKX 704
D D Q E QD P E D+ KKKL ++ E ++ ++ LV+ +R+
Sbjct: 666 PADNDAGQPTEMDAAPQQDGP----ENEQAADTG-KKKLVITEEHFQRVTQALVMRLRQH 720
Query: 705 XXXXXXXXXXSSGMHKSAVVSWYLEQLVAQGQIESEDELLERKTLVEKVIDRLMYHDQVI 764
+GM + ++ WY+EQ AQG S E+ E ++ +I+RL+ D +
Sbjct: 721 EESVTKDGDGLAGMKQGDLIIWYVEQQNAQGAYSSTAEVKEEVKCIKAIIERLIQRDGHL 780
Query: 765 IPLSTTGLRGTQKSSEQDIEDDPLLVVHPNYVVD 798
I + + + + +L V+PNYV+D
Sbjct: 781 IVIDEGAAPAADDGAARRTSESRILAVNPNYVID 814
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 286 bits (702), Expect = 4e-77
Identities = 212/621 (34%), Positives = 320/621 (51%), Gaps = 63/621 (10%)
Query: 36 NEIKYEKHAKELLKPELS-TLEVSFDDVEKYNQNLATTIIEEYYRIYPFLNRAILNYILS 94
+E KY + +L+ E +L+V+ DV ++ +L ++ YP AI + +L
Sbjct: 173 DEGKYMRAIHRILELEGGESLDVNAHDVFDHDPDLYGKMVR-----YPLEVLAIFDIVL- 226
Query: 95 LAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAKIGTLIRISGQIVRTHPVHPELVQGT 154
+ + L +K ++ + +R L + I ++ I G I+R V PEL +
Sbjct: 227 MDLVARIEPLFEKHIQTRIYNLKSSVCLRNLNPSDIEKMVSIKGMIIRCSSVIPELKEAV 286
Query: 155 F------------------YTIPTICRNPVCANRRRFMLDADKSVFVDFQKIRIQETQAE 196
F T P IC+ C L ++ F D Q I++QET E
Sbjct: 287 FRCLVCGFYSEPVMVDRGRVTEPHICQKEQCKATNSMTLVHNRCRFADKQIIKLQETPDE 346
Query: 197 LPRGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIVVPDVGALSMPGSRAEITTRTKLAN 256
+P G P ++ SV D+ + D G PG R EIT +
Sbjct: 347 IPEGGTPHTV----------SVLMHDK---------LVDAGK---PGDRVEITGIYRA-- 382
Query: 257 EGQMEGIKGLKALGVRELHYKTAFLACSVQAVSRRFGTAELPTHDLTTEDMRKQMTDKEW 316
M G V+ + KT V+ + P + TTED + DK
Sbjct: 383 ---MSIRVGPTQRTVKSIFKKTDKSRLHVEDSME----TDNPNANKTTED--DFLRDKV- 432
Query: 317 DKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCI 376
+K+ E+S+ ++Y+ L SL P+I ++VKRG+L LFGG A G + RGDIN+ +
Sbjct: 433 EKLKELSKLPDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALRLPSGASFRGDINILL 492
Query: 377 VGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADN 436
VGDP T+KSQLL+ + +++PR +YTSG+ SSA GLTA V +D E+ + V+E+GAL+L+D
Sbjct: 493 VGDPGTSKSQLLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDK 552
Query: 437 GVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAK 496
GVCCIDEFDKM + +HE MEQQT+S+AKAG+ A+LNARTS+LA ANP RY+
Sbjct: 553 GVCCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPTESRYNPRL 612
Query: 497 SLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKEESYDC-VYSRDDLL 555
S+ N+ L P ++SRFDL ++++D++ E D +A+ IV LH + V L+
Sbjct: 613 SVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPNIEELEVLDLPTLV 672
Query: 556 RYIAFARS-FKPVITEEAGKLLVEYYXXXXXXXXXXXXXXWRI--TVRQLESMVRLAEGV 612
YI++AR +P +++EA + L Y I T RQ+ES++RL+E +
Sbjct: 673 AYISYARKHIQPQLSDEAAEELTRGYVEMRKRGNSPGSRKKVITATARQIESLIRLSEAL 732
Query: 613 AKMHCSGHVTPAHVHEAYRLL 633
A+M S V V EA+RLL
Sbjct: 733 ARMRFSEMVEVQDVVEAFRLL 753
>11_04_0331 +
16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 246 bits (601), Expect = 7e-65
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 26/357 (7%)
Query: 310 QMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLR 369
++TD++ ++ ++++D + ++ S+ PSI+G+ ++K + L +FGG K LR
Sbjct: 506 KLTDEDKAEIEKLAKDPRIGERIVKSIAPSIYGHEDIKTAIALAMFGGQEKNVKGKHRLR 565
Query: 370 GDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAG 429
GDINV ++GDP TAKSQ LK V + RAVYT+GK +SA GLTAAV +D + ++ +E G
Sbjct: 566 GDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGG 625
Query: 430 ALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIG 489
AL+LAD G+C IDEFDKM+ D+V+IHEAMEQQ+IS++KAG+ +L AR S++AAANPIG
Sbjct: 626 ALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIG 685
Query: 490 GRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKE------- 542
GRYD +K+ QNV L+ PI+SRFD+ ++ D D +AR +VD H +
Sbjct: 686 GRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDPFTDEMLARFVVDSHARSQPKGANLE 745
Query: 543 ----------------ESYDCVYSRDDLLRYIAFAR-SFKPVITEEAGKLLVEYYXXXXX 585
++ + S+D L +YI +A+ + P I + + Y
Sbjct: 746 DRVPTDVEDDPLAAARQADPDILSQDMLKKYITYAKLNVFPKIHDADLDKISHVYAELRR 805
Query: 586 XXXXXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQ 642
I VR +ES++R++E A+MH +V+ V A R+L S I ++
Sbjct: 806 ESSHGQGV--PIAVRHIESIIRMSEAHARMHLRSYVSQEDVDMAIRVLLDSFISTQK 860
Score = 75.4 bits (177), Expect = 2e-13
Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 14 KDEVGIRCQKLFQDFLEEF----KEDNEIKYEKHAKELLKPELSTLEVSFDDVEKYNQNL 69
+DEV K F++FL + E E +Y + E++ +LE+ + + N+
Sbjct: 236 RDEVRRFIAKKFKEFLLTYVNPKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIYIHPNI 295
Query: 70 ATTIIEEYYRIYPFLNRAILNYILSLAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAK 129
A + + + + N + L + +++ K YV ++P ++R +
Sbjct: 296 AIWLADAPQSVLEVMEEVAKNVVFDLHKN--YRNIHQK-IYVRITNLPVYDQIRNIRQIH 352
Query: 130 IGTLIRISGQIVRTHPVHPELVQGTF----------------YTIPTICRNPVCANRRRF 173
+ T+IRI G + R V P+L Q F YT + P C ++ F
Sbjct: 353 LNTMIRIGGVVTRRSGVFPQLQQVKFDCSKCGTVLGPFFQNSYTEVKVGSCPECQSKGPF 412
Query: 174 MLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTG 228
++ +++++ ++QK+ +QE+ +P G +PR EVIL + ++ + G+ + TG
Sbjct: 413 TINVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTG 467
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 230 bits (563), Expect = 3e-60
Identities = 116/235 (49%), Positives = 165/235 (70%), Gaps = 8/235 (3%)
Query: 312 TDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGD 371
T ++ ++ E+SR + ++ L SL PSI+G+ +K+ V+L++ GGV K GT LRGD
Sbjct: 293 TREDLKRMKEISRRNDTFDLLGNSLAPSIYGHLWIKKAVVLLMLGGVEKNLKNGTHLRGD 352
Query: 372 INVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEES--FDFV---- 425
IN+ +VGDPS AKSQLL+ V I P A+ T+G+ SS GLTAAV D+E+ DF+
Sbjct: 353 INMMMVGDPSVAKSQLLRAVMNIAPLAISTTGRGSSGVGLTAAVTSDQETGLSDFLWLGE 412
Query: 426 --IEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILA 483
+EAGA++LAD GV CIDEFDKM+ D+VAIHE MEQQT+++AKAG+ A+LNAR S++A
Sbjct: 413 RRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVIA 472
Query: 484 AANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLH 538
AANPI G YDR+ + +N+ L ++SRFDL FI++D+ +D I+ + +H
Sbjct: 473 AANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPEIDRQISEHVARMH 527
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Query: 554 LLRYIAFARSF-KPVITEEAGKLLVEYYXXXXXXXXXXXXXXWR--ITVRQLESMVRLAE 610
L +YI +A++ +P +T+EA + Y IT R LE+++RL+
Sbjct: 585 LKKYIHYAKNLIQPRLTDEASDHIATSYAELRDGGANAKSGGGTLPITARTLETIIRLST 644
Query: 611 GVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDI-HLDEDEPQCEPSMDVDQDEPNGTA 669
AKM V V A ++LN +I E ++ ++ E + + D D G A
Sbjct: 645 AHAKMKLRHEVLKTDVEAALQVLNFAIYHKELTEMEEREQREMEMKQQADHDAGASGGNA 704
Query: 670 ETPSNGDSAP 679
+ + + P
Sbjct: 705 DEHRSSGNDP 714
Score = 36.3 bits (80), Expect = 0.096
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 182 FVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIVVPDVGALSM 241
+ D Q + +QE G +PR++++I+ + V+S + GDR G +P S+
Sbjct: 208 YKDHQTLSMQEVPENSAPGQLPRTVDIIVEDDLVDSCKPGDRVSIVGVYKALPGKSKGSV 267
Query: 242 PG 243
G
Sbjct: 268 SG 269
>02_05_1080 -
33955034-33955117,33955199-33955300,33955381-33955510,
33955674-33955783,33955827-33955950,33956042-33956136,
33956205-33956300,33956419-33956551,33956668-33956759,
33956844-33956948,33957201-33957335,33957421-33957526,
33957621-33957748,33957860-33957958,33958049-33958228,
33958303-33958446,33958533-33958647,33958739-33958905
Length = 714
Score = 227 bits (556), Expect = 2e-59
Identities = 142/347 (40%), Positives = 194/347 (55%), Gaps = 47/347 (13%)
Query: 321 EMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDP 380
E ++ + Y + + + PSI+G+++VK+ + +LFGG K
Sbjct: 319 EFAQRPDAYVKICSMIGPSIYGHSDVKKAIACLLFGGSKK-------------------- 358
Query: 381 STAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCC 440
LK V + P AVYTSGK SSAAGLTA+V+RD S +F +E GA++LAD GV C
Sbjct: 359 ------FLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDGSSREFYLEGGAMVLADGGVVC 412
Query: 441 IDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQ 500
IDEFDKM P D+VAIHEAMEQQTIS+AKAG+ LN+RTS+LAAANPI GRYD K+ Q
Sbjct: 413 IDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIAGRYDDLKTAQD 472
Query: 501 NVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCN----KEESYDCVYSRDDLLR 556
N+ L I+SRFDL FI+ D D IA I+ +H + ++ D + L R
Sbjct: 473 NIDLQTTILSRFDLIFIVKDVRMYDQDKRIASHIIKVHASGAAASSKNTDASEGENWLKR 532
Query: 557 YIAFAR-SFKPVITEEAGKLLVEYYXXXXXXXX----------------XXXXXXWRITV 599
YI + R + KP ++E+A ++L Y ITV
Sbjct: 533 YIEYCRVTCKPRLSEKAAEMLQNKYVEIRQARAKDFSLSLTKMRQQAHETGRAAAIPITV 592
Query: 600 RQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIH 646
RQLE+++RL+E +AKM + TP HV EA+RL N S + + I+
Sbjct: 593 RQLEAIIRLSESLAKMRLTSVATPEHVEEAFRLFNVSTVDAARSGIN 639
Score = 37.9 bits (84), Expect = 0.031
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 178 DKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTG 228
DKS +VD Q +++QE ++P G +PR++ + + V+++ G R G
Sbjct: 218 DKSKYVDLQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVIG 268
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 208 bits (508), Expect = 1e-53
Identities = 109/256 (42%), Positives = 163/256 (63%), Gaps = 8/256 (3%)
Query: 330 NNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLK 389
N+++ + P I+G VK V L L GGV GT +RG+ ++ +VGDP T KSQ LK
Sbjct: 325 NSILKGICPQIYGLFTVKLAVALTLIGGVQHVDASGTKVRGEPHMLLVGDPGTGKSQFLK 384
Query: 390 QVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDP 449
++++ R+V T+G S++AGLT V+D ++++EAGAL+LAD G+CCIDEFD M
Sbjct: 385 FAAKLSNRSVITTGLGSTSAGLTVTAVKD--GGEWMLEAGALVLADGGLCCIDEFDSMRE 442
Query: 450 GDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIM 509
D+ IHEAMEQQTIS+AKAG+ TLN RT++ A NP G+YD +SL N LS P++
Sbjct: 443 HDRTTIHEAMEQQTISIAKAGLVTTLNTRTTVFGATNP-KGQYDPNESLSVNTTLSGPLL 501
Query: 510 SRFDLFFILIDESSEMVDYAIARKIV----DLHCNKEESYDCVYSRDDLLRYIAFARS-F 564
SRFD+ +L+D ++ D ++ I+ + K + +++ L RYI + + F
Sbjct: 502 SRFDIVLVLLDTKNKKWDKIVSSHILAENTEEKKGKTSDPEVMWTLSMLRRYIHYVKQHF 561
Query: 565 KPVITEEAGKLLVEYY 580
KPV+T+EA +++ YY
Sbjct: 562 KPVLTKEAERVISSYY 577
Score = 56.8 bits (131), Expect = 6e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 146 VHPELVQGTFYTIPTICRNPVC--ANRRRFMLDADKSVFVDFQKIRIQETQAELPRGCIP 203
VHPEL G T+P C++ F L D D+Q+I+IQE L G IP
Sbjct: 179 VHPELEAGNRITLPASCKSKSAKGCGGANFQLIEDSITCHDYQEIKIQENIQLLGVGSIP 238
Query: 204 RSLEVILRAEAVESVQAGDRYDFTGTL 230
RS+ +IL + V+ V+AGD TG L
Sbjct: 239 RSMPIILMDDLVDIVKAGDDVVVTGRL 265
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 206 bits (504), Expect = 4e-53
Identities = 92/182 (50%), Positives = 132/182 (72%)
Query: 310 QMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLR 369
++ E +++ ++ D ++YN L SL P I G+ +VK+ +LL+L G + +G +R
Sbjct: 315 ELKGDEQEQIDRLAEDGDIYNKLARSLAPEIFGHEDVKKALLLLLVGAPHRKLTDGMKIR 374
Query: 370 GDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAG 429
GD+++C++GDP AKSQLLK + + PR VYT+G+ SS GLTAAV +D + +FV+E G
Sbjct: 375 GDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEFVLEGG 434
Query: 430 ALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIG 489
AL+LAD G+C IDEFDKM+ D+ AIHE MEQQT+S+AKAG+ +LNART++LAAANP
Sbjct: 435 ALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAW 494
Query: 490 GR 491
GR
Sbjct: 495 GR 496
Score = 57.6 bits (133), Expect = 4e-08
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 108 ECYVSFVDVPTRHKVRELTTAKIGTLIRISGQIVRTHPVHPELVQGTFYT---------- 157
E Y+ T +R++ + IG L++ISG + R V P L+Q YT
Sbjct: 136 EVYIKAFSKVTPLTIRQVKASNIGQLVKISGIVTRCSDVKP-LMQVAVYTCEECGFEIYQ 194
Query: 158 -------IPTI-CRNPVCA-NRRR--FMLDADKSVFVDFQKIRIQETQAELPRGCIPRSL 206
+P C + C N+ + +L S F+ FQ++++QE +P+G IPRSL
Sbjct: 195 EVTARVFMPLFECPSQRCKLNKAKGNLILQLRASKFLKFQEVKLQELAEHVPKGHIPRSL 254
Query: 207 EVILRAEAVESVQAGDRYDFTGTLIVVPDVGALSM 241
V LR E V GD + +G + +P G +M
Sbjct: 255 TVHLRGELTRKVAPGDVVEMSGIFLPMPYYGFRAM 289
Score = 33.5 bits (73), Expect = 0.68
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 557 YIAFARSFKPVITEEAGKLLVEYYXXXXXXXXXXXXXXWRITVRQLESMVRLAEGVAKMH 616
YI+ AR P + E + + Y T+R L S++R++ +A++
Sbjct: 498 YISTARRVVPSVPRELEEYIATAYSSIRQEEAKSNAPHSYTTIRTLLSILRISIALARLR 557
Query: 617 CSGHVTPAHVHEAYRLLNKS 636
S V + V EA RL+ S
Sbjct: 558 FSETVAQSDVDEALRLMQMS 577
>05_05_0138 +
22644263-22644460,22644617-22644711,22645786-22645949,
22646725-22646970,22647600-22647944,22648516-22648586,
22648676-22648794,22650508-22650637,22650806-22650857,
22650974-22651136,22651244-22651418,22651772-22651942,
22652275-22652388,22652559-22652609
Length = 697
Score = 192 bits (469), Expect = 7e-49
Identities = 89/165 (53%), Positives = 124/165 (75%), Gaps = 1/165 (0%)
Query: 376 IVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLAD 435
I+GDP KSQLL+ + ++PR +Y G ++ AGLT AVV+D S D+ EAGA++LAD
Sbjct: 297 ILGDPGLGKSQLLQAAAAVSPRGIYVCGNTTTNAGLTVAVVKDSMSNDYAFEAGAMVLAD 356
Query: 436 NGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRA 495
G+CCIDEFDKM Q A+ EAMEQQ +S+AKAG+ A+L+ARTS+LAAANP+GG YDRA
Sbjct: 357 RGICCIDEFDKMSAEHQ-ALLEAMEQQCVSVAKAGLVASLSARTSVLAAANPVGGHYDRA 415
Query: 496 KSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCN 540
K++ +N+ +S ++SRFDL FIL+D+ E++D ++ I+ LH N
Sbjct: 416 KTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSDHIIALHSN 460
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 313 DKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIE--GTTLRG 370
D E+ ++ +++ ++ S PSI+G+ VK G+ L LFGGV K +I+ +RG
Sbjct: 200 DLEFISKFKEEHGADVFRQILHSFCPSIYGHELVKAGITLALFGGVQKHSIDQNKVPVRG 259
Query: 371 DINVCIVGDPS 381
DI+ +VG+PS
Sbjct: 260 DIHAVVVGNPS 270
Score = 37.5 bits (83), Expect = 0.042
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 537 LHCNKEESYDCVYSRDDLLRYIAFARSF-KPVIT--EEAGKLLVEYYXXXXXXXXXXXXX 593
LH K++ + C L +YI++ARS P I+ A L ++Y
Sbjct: 496 LHPEKDKDF-CPLPGPLLRKYISYARSHVNPRISMPSPAADSLQKFYLDLRKQSDSADGT 554
Query: 594 XWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSI 637
IT RQLES+VRLAE A++ VT E ++ +S+
Sbjct: 555 P--ITARQLESLVRLAEARARVDLREEVTLEDAKEVIDIMTESL 596
>05_01_0516 + 4354494-4354575,4354621-4354832
Length = 97
Score = 66.1 bits (154), Expect = 1e-10
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Query: 398 AVYTSGKASSAAGLTAAVVRDEES--FDFVI-----------EAGALMLADNGVCCIDEF 444
A+ T+G+ SS GL AAV D E+ + ++ AGA++LAD CIDEF
Sbjct: 4 ALSTTGRVSSGVGLPAAVTSDRETEVLNKILWTGERRQSGGLVAGAIVLADRCAVCIDEF 63
Query: 445 DKMDPGDQVAIHEAMEQQTISLAKAGVRATLNAR 478
DKM+ D+VAIH +E +T+++ AG+ A+LNAR
Sbjct: 64 DKMNDQDRVAIHAVLEHKTVTI--AGIHASLNAR 95
>01_01_1189 + 9454042-9455655
Length = 537
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 625 HVHEAYRLLNKSIIRVEQPDIHLDEDEPQCEPSMDVDQDEPNG-TAETPSNGDS-----A 678
H A ++NK ++E+P H ED+ Q + DV +D+ AE NG+S A
Sbjct: 395 HKEGANTVVNKKEEQIEEPVSHKTEDDKQGADTPDVSEDKKTTLAAEKDGNGESKDEVAA 454
Query: 679 PKKKLALSFEE 689
PK + EE
Sbjct: 455 PKSSNDMGREE 465
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 5 DTYATQSQVKDEVGIRCQKLFQDFLEEFKEDNEIKYEKHAKELLKPELSTLEVSFDDVEK 64
D A+ + V+ E C + F D EE E+ EI+YE+ +E+ + E+ E ++VE+
Sbjct: 6 DNAASANSVEPEKSEECLE-FDDDEEEEVEEEEIEYEEIEEEIEEEEVEEDEDVVEEVEE 64
Query: 65 YNQ 67
++
Sbjct: 65 VDE 67
>11_01_0132 + 1090778-1090903,1091290-1091412
Length = 82
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 313 DKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLF 355
D E D V E+ R N ++ITSL+ +IH N + GV +F
Sbjct: 34 DTEEDVVREVGRSTN-QTSIITSLYFAIHANERNQSGVATFIF 75
>05_03_0162 -
9050981-9051003,9051141-9052273,9052388-9053310,
9053560-9054615
Length = 1044
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 608 LAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIHLDE 649
+A G+ MH HV +A+ LL K ++ E D+ +DE
Sbjct: 324 VARGMQAMHPFHHVDKLCPPDAWSLLKKQVVSSEMEDVEIDE 365
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 30.3 bits (65), Expect = 6.3
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 348 RGVLLMLFGGVAK---TTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGK 404
+GV +L GG+ + T I G + G VC+ A QL + T + S
Sbjct: 55 QGVDALLGGGLRQGQLTEITGQSSSGKTQVCLCSASHVAARQLGVVMYLDTSNSFSPSRI 114
Query: 405 ASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTI 464
A G ++VR+ ++ + +M + + C FD D + +H+
Sbjct: 115 ARIVDGFPISLVREPKN----VRLERVM---SSIICKSVFDIFDLFE--VLHQLELSLKS 165
Query: 465 SLAKAGVRATLNARTSILAAANPI-GGRYDRAKSLQQNVAL 504
+ G + L SI + PI GG+Y R +S+ +VA+
Sbjct: 166 KVNNGGNKICLLIIDSISSILAPINGGKYPRGRSMMISVAM 206
>06_03_1476 -
30399317-30399347,30399636-30399722,30400035-30400192,
30400276-30400497,30400744-30400881,30400977-30401105,
30401346-30401369,30401569-30401614,30401692-30401773,
30401836-30401955,30402039-30402072
Length = 356
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 41 EKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEYYRIYPFLNRAILNYILSLAE 97
E EL + E+ +E + D++ + N + ++E IY F R+ ++Y L L +
Sbjct: 144 EVMGSELKEIEMEDIEEAAPDIDSCDANNSLAVVEYVDEIYSFYRRSEVHYKLELLD 200
>03_02_0879 +
12097602-12098120,12099215-12099254,12099550-12099601,
12099946-12100008,12100079-12100148,12100452-12100778
Length = 356
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 626 VHEAYRLLNKSIIRVEQPDIHLDED-EPQCEPSMDVDQDEPNGTAETPSNGDSAPKK 681
+HE + K +R+E+ +L + E QC+ S QD +G TPS ++ K
Sbjct: 243 LHEQLEIQRKLQLRIEEQGKYLQKMFEKQCKSSTQSVQDPSSGDTATPSEPSNSVDK 299
>01_06_0998 +
33685051-33685143,33685231-33685322,33685490-33685587,
33686671-33686826,33686927-33687546,33687888-33687958,
33688072-33688326,33688426-33688543,33688671-33688842,
33688928-33689469
Length = 738
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 343 NNEVKRGVLLMLFGG-VAKTTIEGTTLRGDINVCI 376
NNE K G ++ GG +K + GTT+ G I +CI
Sbjct: 362 NNESKSGFQPLVNGGDCSKGALNGTTINGSIVLCI 396
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,580,074
Number of Sequences: 37544
Number of extensions: 809542
Number of successful extensions: 2286
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2237
Number of HSP's gapped (non-prelim): 38
length of query: 799
length of database: 14,793,348
effective HSP length: 88
effective length of query: 711
effective length of database: 11,489,476
effective search space: 8169017436
effective search space used: 8169017436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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