Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000828-TA|BGIBMGA000828-PA|IPR008994|Nucleic
acid-binding, OB-fold, IPR001208|MCM, IPR008049|MCM protein 6
(799 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44635.1 68418.m05469 minichromosome maintenance family prote... 641 0.0
At2g16440.1 68415.m01883 DNA replication licensing factor, putat... 307 2e-83
At2g07690.1 68415.m00993 minichromosome maintenance family prote... 288 9e-78
At4g02060.1 68417.m00276 prolifera protein (PRL) / DNA replicati... 273 3e-73
At3g09660.1 68416.m01145 minichromosome maintenance family prote... 256 4e-68
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 249 5e-66
At5g46280.1 68418.m05697 DNA replication licensing factor, putat... 237 3e-62
At2g14050.1 68415.m01563 minichromosome maintenance family prote... 174 2e-43
At3g52490.1 68416.m05772 heat shock protein-related contains sim... 31 3.0
At1g79150.1 68414.m09229 expressed protein ; expression supporte... 31 4.0
At1g10570.2 68414.m01191 Ulp1 protease family protein contains P... 31 4.0
At1g10570.1 68414.m01190 Ulp1 protease family protein contains P... 31 4.0
At3g59020.1 68416.m06578 importin beta-2 subunit family protein ... 30 6.9
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 30 6.9
At5g61560.1 68418.m07725 protein kinase family protein contains ... 29 9.2
>At5g44635.1 68418.m05469 minichromosome maintenance family protein
/ MCM family protein similar to SP|P97311 DNA
replication licensing factor MCM6 {Mus musculus};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 831
Score = 641 bits (1583), Expect = 0.0
Identities = 356/828 (42%), Positives = 508/828 (61%), Gaps = 46/828 (5%)
Query: 13 VKDEVGIRCQKLFQDFLEEFKEDN---EIKYEKHAKELLKPELSTLEVSFDDVEKYNQNL 69
V DE I+ + +F +FL+ F+ D E+ YE + + E + + + F V +N L
Sbjct: 8 VMDEQAIQVENVFLEFLKSFRLDANKPELYYEAEIEAIRGGESTMMYIDFSHVMGFNDAL 67
Query: 70 ATTIIEEYYRIYPFLNRAILNYILSLAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAK 129
I +EY R P+L A +++ + + + D +K+ VSF ++P ++RELTTA+
Sbjct: 68 QKAIADEYLRFEPYLRNACKRFVIEMNPSFISDDTPNKDINVSFYNLPFTKRLRELTTAE 127
Query: 130 IGTLIRISGQIVRTHPVHPELVQGTF-----------------YTIPTICRNPVCANRRR 172
IG L+ ++G + RT V PEL+ GTF YT PTIC +P C NR R
Sbjct: 128 IGKLVSVTGVVTRTSEVRPELLYGTFKCLDCGSVIKNVEQQFKYTQPTICVSPTCLNRAR 187
Query: 173 FMLDADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIV 232
+ L +S F D+Q++R+QET E+P G +PRSL+VILR E VE +AGD FTGT++V
Sbjct: 188 WALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVV 247
Query: 233 VPDVGALSMPGSRAEI---TTRTKLANEGQMEGIKGLKALGVRELHYKTAFLACSVQAVS 289
+PD+ AL+ PG RAE +++ K + G EG++GLKALGVR+L Y+ AF+A SVQ
Sbjct: 248 IPDISALAAPGERAECRRDSSQQKSSTAGH-EGVQGLKALGVRDLSYRLAFIANSVQIAD 306
Query: 290 RRFGTAELPTHDLTTEDMRKQMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRG 349
T + + ED ++Q T +E D++ +M + +N L+ S+ P++ G+ ++KR
Sbjct: 307 GSRNTDMRNRQNDSNEDDQQQFTAEELDEIQQMRNTPDYFNKLVGSMAPTVFGHQDIKRA 366
Query: 350 VLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAA 409
VLLML GGV KTT EG LRGDINVCIVGDPS AKSQ LK + I PR+VYTSGK+SSAA
Sbjct: 367 VLLMLLGGVHKTTHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAA 426
Query: 410 GLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKA 469
GLTA V ++ E+ +F IEAGALMLADNG+CCIDEFDKMD DQVAIHEAMEQQTIS+ KA
Sbjct: 427 GLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISITKA 486
Query: 470 GVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYA 529
G++ATLNARTSILAAANP+GGRYD++K L+ NV L P I+SRFDL +++ID+ E+ DY
Sbjct: 487 GIQATLNARTSILAAANPVGGRYDKSKPLKYNVNLPPAILSRFDLVYVMIDDPDEVTDYH 546
Query: 530 IARKIVDLHCNKEESYDCVYSRDDLLRYIAFARSFKPVITEEAGKLLVE-YYXXXXXXXX 588
IA IV +H E + ++ L RYIA+A++ KP ++ EA KLLVE Y
Sbjct: 547 IAHHIVRVHQKHEAALSPEFTTVQLKRYIAYAKTLKPKLSPEARKLLVESYVALRRGDTT 606
Query: 589 XXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIHLD 648
+R+TVRQLE+++RL+E +A+ H V P+HV A RLL S+I VE DI L
Sbjct: 607 PGTRVAYRMTVRQLEALIRLSEAIARSHLEILVKPSHVLLAVRLLKTSVISVESGDIDLS 666
Query: 649 E----------DEPQCEPSMDVDQDEPNGTAETPS--NGDSAPKKKLALSFEEYKSLSNM 696
E D E +D ++D+ NG AE S + A +KL +S EEY ++
Sbjct: 667 EYQDANGDNMDDTDDIENPVDGEEDQQNGAAEPASATADNGAAAQKLVISEEEYDRITQA 726
Query: 697 LVVYMRKXXXXXXXXXXXSSGMHKSAVVSWYLEQLVAQGQIESEDEL-LERKTLVEKVID 755
LV+ +R+ G+ + ++ W+++Q + + S++++ L+ K L +I+
Sbjct: 727 LVIRLRQHEETVNKDSSELPGIRQKELIRWFIDQQNEKKKYSSQEQVKLDIKKL-RAIIE 785
Query: 756 RLMYHDQVIIPLS-----TTGLRGTQKSSEQDIEDDPLLVVHPNYVVD 798
L+ + +I L+ T+K S Q D+ +L V PNYV++
Sbjct: 786 SLVCKEGHLIVLANEQEEAAEAEETKKKSSQ--RDERILAVAPNYVIE 831
>At2g16440.1 68415.m01883 DNA replication licensing factor, putative
similar to SP|P49717 DNA replication licensing factor
MCM4 (CDC21 homolog) {Mus musculus}, SP|P29458 Cdc21
protein {Schizosaccharomyces pombe}; contains Pfam
profile PF00493: MCM2/3/5 family
Length = 847
Score = 307 bits (754), Expect = 2e-83
Identities = 202/622 (32%), Positives = 328/622 (52%), Gaps = 59/622 (9%)
Query: 37 EIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEYYRIYPFLNRAILNYILSLA 96
E KY +++++ E ++V DV Y+ +L ++ YP AI + +L
Sbjct: 157 EGKYMVSIRKVIEIEGEWIDVDAFDVFDYDPDLYNKMVR-----YPLEVLAIFDIVLMDI 211
Query: 97 ETGMKKDLQDKECYVSFVDVPTRHKVRELTTAKIGTLIRISGQIVRTHPVHPELVQGTFY 156
+ + + L +K V ++ T +R L + I +I + G I+R+ + PE+ + F
Sbjct: 212 VSTINR-LFEKHVQVRIFNLRTSTSMRNLNPSDIEKMISLKGMIIRSSSIIPEIREAVFR 270
Query: 157 TI------------------PTICRNPVCANRRRFMLDADKSVFVDFQKIRIQETQAELP 198
+ P C C + L ++ F D Q +R+QET E+P
Sbjct: 271 CLVCGYFSDPIIVDRGKISEPPTCLKQECMTKNSMTLVHNRCRFADKQIVRLQETPDEIP 330
Query: 199 RGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIVVPDVGALSMPGSRAEITTRTKLANEG 258
G P ++ ++L + V++ + GDR + + G +T R A+
Sbjct: 331 EGGTPHTVSLLLHDKLVDNGKPGDR---------------IEVTGIYRAMTVRVGPAH-- 373
Query: 259 QMEGIKGLKALGVRELHYKTAFLACSVQAVSRRFGTAELPT---HDLTTEDMRKQMTDKE 315
+ +K++ +KT ++ S+ +AE P + L D ++ +++
Sbjct: 374 -----RTVKSV------FKTYIDCLHIKKASKLRMSAEDPMDVDNSLRRVDEDVELDEEK 422
Query: 316 WDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVC 375
K E+S+ ++Y L SL P+I ++VK+G+L LFGG A G RGDIN+
Sbjct: 423 LRKFQELSKQPDIYERLSRSLAPNIWELDDVKKGLLCQLFGGNALNLASGANFRGDINIL 482
Query: 376 IVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLAD 435
+VGDP T+KSQLL+ + +++PR +YTSG+ SSA GLTA V +D E+ + V+E+GAL+L+D
Sbjct: 483 LVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSD 542
Query: 436 NGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRA 495
G+CCIDEFDKM + +HE MEQQT+S+AKAG+ A+LNARTS+LA ANP G RY+
Sbjct: 543 RGICCIDEFDKMSDSARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPR 602
Query: 496 KSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHC-NKEESYDCVYSRDDL 554
S+ +N+ L P ++SRFDL ++++D+ E D +A+ IV LH N E + + L
Sbjct: 603 LSVIENIHLPPTLLSRFDLIYLILDKPDEQTDRRLAKHIVALHFENAESAQEEAIDITTL 662
Query: 555 LRYIAFAR-SFKPVITEEAGKLLVEYYXXXXXXXXXXXXXXWRITV--RQLESMVRLAEG 611
Y+++AR + P +++EA + L Y IT RQ+ES++RL+E
Sbjct: 663 TTYVSYARKNIHPKLSDEAAEELTRGYVELRKAGKFAGSSKKVITATPRQIESLIRLSEA 722
Query: 612 VAKMHCSGHVTPAHVHEAYRLL 633
+A+M S V V EA+RLL
Sbjct: 723 LARMRFSEWVEKHDVDEAFRLL 744
>At2g07690.1 68415.m00993 minichromosome maintenance family protein
/ MCM family protein similar to SP|P55862 DNA
replication licensing factor MCM5 (CDC46 homolog)
{Xenopus laevis}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 727
Score = 288 bits (707), Expect = 9e-78
Identities = 159/344 (46%), Positives = 217/344 (63%), Gaps = 9/344 (2%)
Query: 312 TDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGD 371
T E ++ + + +++Y N+ T + PSI G+ +VKR +LFGG K+ +G LRGD
Sbjct: 309 TPDEEEEFKKFADSQDVYKNICTKIAPSIFGHEDVKRAAACLLFGGSRKSLPDGVKLRGD 368
Query: 372 INVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGAL 431
INV ++GDPSTAKSQ LK V + P AVYTSGK SSAAGLTA+V+RD + +F +E GA+
Sbjct: 369 INVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDSSTREFYLEGGAM 428
Query: 432 MLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGR 491
+LAD GV CIDEFDKM P D+VAIHEAMEQQTIS+AKAG+ LN+RTS+LAAANP GR
Sbjct: 429 VLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGR 488
Query: 492 YDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKEE-SYDCVYS 550
YD K+ Q N+ L I+SRFDL FI+ D D IA I+ +H + + S + S
Sbjct: 489 YDDLKTAQDNIDLQTTILSRFDLIFIVKDIRKYSQDKEIASHIIRVHASANKFSDENTDS 548
Query: 551 RDD--LLRYIAFARS-FKPVITEEAGKLLVEYYXXXXXXXXXXXXXXWR-----ITVRQL 602
++D L RYI + R+ P ++++A + L Y ITVRQL
Sbjct: 549 KEDNWLKRYIQYCRARCHPRLSKDAAENLQRKYVTIRMDMKRRAHETGEAAPIPITVRQL 608
Query: 603 ESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIH 646
E++VRL+E +AKM S TP V +A++L + S + + I+
Sbjct: 609 EAIVRLSESLAKMRLSHEATPDDVDKAFKLFDTSTMDAARSGIN 652
>At4g02060.1 68417.m00276 prolifera protein (PRL) / DNA replication
licensing factor Mcm7 (MCM7) identical to DNA
replication licensing factor Mcm7 SP|P43299 PROLIFERA
protein {Arabidopsis thaliana}; contains Pfam profile
PF00493: MCM2/3/5 family
Length = 716
Score = 273 bits (670), Expect = 3e-73
Identities = 144/370 (38%), Positives = 221/370 (59%), Gaps = 5/370 (1%)
Query: 278 TAFLACSVQAVSRRFGTAELPTHDLTTEDMRKQMTDKEWDKVYEMSRDRNLYNNLITSLF 337
T F A V+ + A TH + + D+E +++ ++ D ++YN L SL
Sbjct: 277 TGFKALRAGLVADTYLEATSVTHFKKKYEEYEFQKDEE-EQIARLAEDGDIYNKLSRSLA 335
Query: 338 PSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPR 397
P I+G+ ++K+ +LL+L G + +G +RGD+++C++GDP AKSQLLK + + PR
Sbjct: 336 PEIYGHEDIKKALLLLLVGAPHRQLKDGMKIRGDVHICLMGDPGVAKSQLLKHIINVAPR 395
Query: 398 AVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHE 457
VYT+GK SS GLTAAV+RD+ + + V+E GAL+LAD G+C IDEFDKMD D+ AIHE
Sbjct: 396 GVYTTGKGSSGVGLTAAVMRDQVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHE 455
Query: 458 AMEQQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFI 517
MEQQT+S+AKAG+ +LNART++LAAANP GRYD ++ +N+ L P ++SRFDL ++
Sbjct: 456 VMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWL 515
Query: 518 LIDESSEMVDYAIARKIVDLHCNKEESYDCVYS--RDDLLR-YIAFARSFKPVITEEAGK 574
++D + D +A+ ++ +H EES + ++LR YI+ AR P + E +
Sbjct: 516 ILDRADMDSDLELAKHVLHVH-QTEESPALGFEPLEPNILRAYISAARRLSPYVPAELEE 574
Query: 575 LLVEYYXXXXXXXXXXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLN 634
+ Y TVR L S++R++ +A++ S V + V EA RL+
Sbjct: 575 YIATAYSSIRQEEAKSNTPHSYTTVRTLLSILRISAALARLRFSESVAQSDVDEALRLMQ 634
Query: 635 KSIIRVEQPD 644
S I + D
Sbjct: 635 MSKISLYADD 644
Score = 54.4 bits (125), Expect = 3e-07
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 107 KECYVSFVDVPTRHK---VRELTTAKIGTLIRISGQIVRTHPVHPELVQGTFYT------ 157
K Y + P++ + +RE+ + IG L+RISG + R V P L+ YT
Sbjct: 125 KRYYEVYFKAPSKGRPSTIREVKASHIGQLVRISGIVTRCSDVKP-LMAVAVYTCEDCGH 183
Query: 158 -----------IPTI-CRNPVCANRRRF---MLDADKSVFVDFQKIRIQETQAELPRGCI 202
+P C + C + +L S F+ FQ+ ++QE +P+G I
Sbjct: 184 EIYQEVTSRVFMPLFKCPSSRCRLNSKAGNPILQLRASKFLKFQEAKMQELAEHVPKGHI 243
Query: 203 PRSLEVILRAEAVESVQAGDRYDFTGTLIVVPDVG 237
PRS+ V LR E V GD +F+G + +P G
Sbjct: 244 PRSMTVHLRGELTRKVSPGDVVEFSGIFLPIPYTG 278
>At3g09660.1 68416.m01145 minichromosome maintenance family protein
/ MCM family protein similar to SP|P49717 DNA
replication licensing factor MCM4 (CDC21 homolog) {Mus
musculus}; contains Pfam profile PF00493: MCM2/3/5
family
Length = 777
Score = 256 bits (627), Expect = 4e-68
Identities = 182/555 (32%), Positives = 300/555 (54%), Gaps = 61/555 (10%)
Query: 122 VRELTTAKIGTLIRISGQIVRTHPVHPELVQGTF-----------------YTIPTICRN 164
++ L A IG L+ + G +V+ V P + Q F ++ P C +
Sbjct: 145 LKNLRAAYIGKLVTVHGTVVKVSTVKPLVTQMAFDCGKCKTGITREFTDGKFSPPLKCDS 204
Query: 165 PVCANRRRFMLDADKSVFVDFQKIRIQETQ--AELPRGCIPRSLEVILRAEAVESVQAGD 222
C ++ F + +DFQKIR+QE Q + G +PR++E L + V+ GD
Sbjct: 205 HGCKSKT-FTPIRSSAQTIDFQKIRVQELQKPEDHEEGRVPRTVECELMEDLVDICIPGD 263
Query: 223 RYDFTGTLIVVPDVGALSMPGSRAEITTRTKLANEGQMEGIKGLKALGVRELHYKTAFLA 282
TG + V+ + + + G ++K N+G ++A+ V+ ++AF
Sbjct: 264 VVTVTGIIGVINNY--MDIGGG------KSKTKNQGFY--YLFIEAVSVKNTKRQSAFEN 313
Query: 283 CSVQAVSRRFGTAELPTHDLTTEDMRKQMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHG 342
+ S + TA++ DL + R D E+ ++ + + ++ S+ PSI+G
Sbjct: 314 SEDSSSSAQ--TADV--GDLYSFSQR----DLEFIVKFKEEYGSDTFRRILHSVCPSIYG 365
Query: 343 NNEVKRGVLLMLFGGVAKTTIE--GTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVY 400
+ VK G+ L LFGGV K +++ +RGDI+V IVGDP KSQLL+ + I+PR +Y
Sbjct: 366 HEIVKAGITLSLFGGVRKHSMDRNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAISPRGIY 425
Query: 401 TSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAME 460
G A++ AGLT AVV+D + D+ EAGA++LAD G+CCIDEFDKM Q A+ EAME
Sbjct: 426 VCGNATTRAGLTVAVVKDSMTNDYAFEAGAMVLADGGLCCIDEFDKMTTEHQ-ALLEAME 484
Query: 461 QQTISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILID 520
QQ +S+AKAG+ A+L+ARTS++AAANP+GG Y+RAK++ +N+ +S ++SRFDL FIL+D
Sbjct: 485 QQCVSVAKAGLVASLSARTSVIAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLD 544
Query: 521 ESSEMVDYAIARKIVDLH-------C-NKEESY--DCVYSRDDLLRYIAFAR----SFKP 566
+ E++D ++ I+ H C K Y DC ++ + ++ F + P
Sbjct: 545 KPDELLDKQVSEHIMSHHRMLGMQTCMQKGILYFQDCGWTLRKMTTFLRFLANCLGNIFP 604
Query: 567 ----VITEEAGKLLVEYYXXXXXXXXXXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVT 622
+++++AG+++ ++Y IT RQLES+VRLA+ A++ +T
Sbjct: 605 MHGILMSKDAGEIIQKFYLKLRDHNTSADST--PITARQLESLVRLAQARARVDLREEIT 662
Query: 623 PAHVHEAYRLLNKSI 637
+ ++ +S+
Sbjct: 663 VQDAMDVVEIMKESL 677
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 249 bits (610), Expect = 5e-66
Identities = 142/354 (40%), Positives = 210/354 (59%), Gaps = 23/354 (6%)
Query: 310 QMTDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLR 369
++T ++ ++ E+S+D + +I S+ PSI+G+ ++K + L +FGG K LR
Sbjct: 473 KLTQEDKTQIEELSKDPRIVERIIKSIAPSIYGHEDIKTALALAMFGGQEKNIKGKHRLR 532
Query: 370 GDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAG 429
GDINV ++GDP TAKSQ LK V + RAVYT+GK +SA GLTAAV +D + ++ +E G
Sbjct: 533 GDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGG 592
Query: 430 ALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIG 489
AL+LAD G+C IDEFDKM+ D+V+IHEAMEQQ+IS++KAG+ +L AR S++AAANP+G
Sbjct: 593 ALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPVG 652
Query: 490 GRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHC------NKEE 543
GRYD +KS QNV L+ PI+SRFD+ ++ D + D +A +V+ H K E
Sbjct: 653 GRYDSSKSFAQNVELTDPILSRFDILCVVKDVVDPVTDEMLAEFVVNSHFKSQPKGGKME 712
Query: 544 SYDC--------------VYSRDDLLRYIAFARSFK-PVITEEAGKLLVEYYXXXXXXXX 588
D V ++ L +Y+ +++ + P + E K L Y
Sbjct: 713 DSDPEDGIQGSSGSTDPEVLPQNLLKKYLTYSKLYVFPKLGELDAKKLETVYANLRRESM 772
Query: 589 XXXXXXWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQ 642
I R LESM+R++E A+MH +VT V+ A R+L S I ++
Sbjct: 773 NGQGVS--IATRHLESMIRMSEAHARMHLRQYVTEEDVNMAIRVLLDSFISTQK 824
Score = 65.7 bits (153), Expect = 1e-10
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 13 VKDEVGIRCQKLFQDFLEEFKEDNEIKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATT 72
++DEV K F+DFL + + K E E + P +LE+ + + + N+A
Sbjct: 210 MRDEVRRFIAKKFKDFLLTYVKP---KNENGDIEYV-PNKCSLEIDYKEFIHVHPNIAIW 265
Query: 73 IIEEYYRIYPFLNRAILNYILSLAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAKIGT 132
+ + + + I L K++ K YV ++P ++R + + T
Sbjct: 266 LADAPQPVLEVMEEVSEKVIFDLHPN--YKNIHTK-IYVRVTNLPVNDQIRNIRQIHLNT 322
Query: 133 LIRISGQIVRTHPVHPELVQ------------GTF----YTIPTICRNPVCANRRRFMLD 176
+IRI G + R V P+L Q G F Y+ + C ++ F ++
Sbjct: 323 MIRIGGVVTRRSGVFPQLQQVKYDCNKCGAVLGPFFQNSYSEVKVGSCSECQSKGPFTVN 382
Query: 177 ADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTG 228
+++++ ++QK+ IQE+ +P G +PR EVIL + ++ + G+ + TG
Sbjct: 383 VEQTIYRNYQKLTIQESPGTVPAGRLPRHKEVILLNDLIDCARPGEEIEVTG 434
>At5g46280.1 68418.m05697 DNA replication licensing factor, putative
similar to SP|Q43704 DNA replication licensing factor
MCM3 homolog (Replication origin activator) (ROA
protein) {Zea mays}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 776
Score = 237 bits (579), Expect = 3e-62
Identities = 112/232 (48%), Positives = 165/232 (71%)
Query: 312 TDKEWDKVYEMSRDRNLYNNLITSLFPSIHGNNEVKRGVLLMLFGGVAKTTIEGTTLRGD 371
T ++ D + ++R + ++ L SL PSI+G+ +K+ V+L++ GGV K GT LRGD
Sbjct: 269 TKQDLDNIKNIARRDDAFDLLARSLAPSIYGHAWIKKAVVLLMLGGVEKNLKNGTHLRGD 328
Query: 372 INVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGAL 431
IN+ +VGDPS AKSQLL+ + I P A+ T+G+ SS GLTAAV D+E+ + +EAGA+
Sbjct: 329 INMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAM 388
Query: 432 MLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATLNARTSILAAANPIGGR 491
+LAD G+ CIDEFDKM+ D+VAIHE MEQQT+++AKAG+ A+LNAR S++AAANPI G
Sbjct: 389 VLADKGIVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGT 448
Query: 492 YDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIVDLHCNKEE 543
YDR+ + +N+ L ++SRFDL FI++D+ +D I+ ++ +H K +
Sbjct: 449 YDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDAGIDSMISEHVLRMHRYKND 500
Score = 48.8 bits (111), Expect = 1e-05
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 537 LHCNKE--ESYDCVYSRDDLLRYIAFARS-FKPVITEEAGKLLVEYYXXXXXXXXXXXXX 593
LH K+ +++D + L +YI +A+ P +T+EA + + E Y
Sbjct: 530 LHGKKKRGQTHDKTLTIKFLKKYIHYAKHRITPKLTDEASERIAEAYADLRNAGSDTKTG 589
Query: 594 -XWRITVRQLESMVRLAEGVAKMHCSGHVTPAHVHEAYRLLNKSIIRVEQPDIHLDEDEP 652
IT R LE+++RLA AKM S VT A A +L+N +I E ++ D ++
Sbjct: 590 GTLPITARTLETIIRLATAHAKMKLSSEVTKADAEAALKLMNFAIYHQELTEMD-DREQE 648
Query: 653 QCEPSMDVDQDEPNG 667
+ + + P+G
Sbjct: 649 ERQREQAEQERTPSG 663
Score = 36.7 bits (81), Expect = 0.060
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 182 FVDFQKIRIQETQAELPRGCIPRSLEVILRAEAVESVQAGDRYDFTGTLIVVPDVGALSM 241
+ D Q + IQE G +PRS++VI + V+S + GDR G +P S+
Sbjct: 184 YKDHQTLSIQEVPENAAPGQLPRSVDVIAEDDLVDSCKPGDRVSVFGIYKALPGKSKGSV 243
Query: 242 PG 243
G
Sbjct: 244 NG 245
>At2g14050.1 68415.m01563 minichromosome maintenance family protein
/ MCM family protein low similarity to SP|P49736 DNA
replication licensing factor MCM2 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 653
Score = 174 bits (424), Expect = 2e-43
Identities = 114/321 (35%), Positives = 176/321 (54%), Gaps = 30/321 (9%)
Query: 299 THDLTTE-DMRKQMTDKEWDKVYEMSRDRNLY--NNLITSLFPSIHGNNEVKRGVLLMLF 355
T++L +E D+ + +K + + RD L N ++ + P + G VK V L L
Sbjct: 277 TNELKSEIDISDDLIEK-FKNFWSHFRDTPLKGRNAILRGICPQVFGLFTVKLAVALTLI 335
Query: 356 GGVAKTTIEGTTLRGDINVCIVGDPSTAKSQLLKQVSEITPRAVYTSGKASSAAGLTAAV 415
GGV GT +RG+ ++ ++GDP T KSQ LK ++++ RAV T+G S++AGLT
Sbjct: 336 GGVQHVDASGTKVRGESHLLLIGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVTA 395
Query: 416 VRDEESFDFVIEAGALMLADNGVCCIDEFDKMDPGDQVAIHEAMEQQTISLAKAGVRATL 475
V+D ++++EAGAL+LAD G+CCIDEFD M D+ IHEAMEQQ+IS+AKAG+ TL
Sbjct: 396 VKD--GGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQSISVAKAGLVTTL 453
Query: 476 NARTSILAAANPIGGRYDRAKSLQQNVALSPPIMSRFDLFFILIDESSEMVDYAIARKIV 535
+ +T + A NP G+YD +N + S L + I++ E+ D
Sbjct: 454 STKTIVFGATNP-KGQYD-PDQYTKNPEWDAVVSSHI-LAEVQIEQDREVDDLT------ 504
Query: 536 DLHCNKEESYDCVYSRDDLLRYIAFA-RSFKPVITEEAGKLLVEYYXXXXXXXXXXXXXX 594
++ L RYI F ++F+PV+++EA +++ YY
Sbjct: 505 -----------TIWPLPMLQRYIQFVKKNFRPVLSKEAEEIISSYYRLQRRSSTHNAA-- 551
Query: 595 WRITVRQLESMVRLAEGVAKM 615
R TVR LES++RLA+G + +
Sbjct: 552 -RTTVRMLESLIRLAQGTSSV 571
Score = 47.2 bits (107), Expect = 4e-05
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 145 PVHPELVQGTFYTIPTIC---RNPVCANRRRFMLDADKSVFVDFQKIRIQETQAELPRGC 201
P+ PEL P C R+ C +D D D+Q+I+IQE L G
Sbjct: 163 PIFPELESINSIVKPPFCPSQRSKACEGTNFDPVD-DTVTRHDYQEIKIQENTQVLGVGV 221
Query: 202 IPRSLEVILRAEAVESVQAGDRYDFTGTL 230
IPRS+ V+L+ + V++V+AGD +G L
Sbjct: 222 IPRSILVVLKDDLVDNVKAGDDVVVSGIL 250
>At3g52490.1 68416.m05772 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 815
Score = 31.1 bits (67), Expect = 3.0
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 400 YTSGKASSAAGLTAAVVRDEESFDFVIE-AGALMLADNGVCCIDEFDKMDPGDQVAIHEA 458
++S ++ SA L +RDE+S ++ + A+ L N V +++ ++ D QV A
Sbjct: 659 FSSTRSDSAEDLRNKRLRDEQSLSYIERFSEAVSLDPNRVILVEDIEQADYLSQVGFKRA 718
Query: 459 MEQQTISLAKAGVRATLNARTSILA 483
+E+ + +G A+L IL+
Sbjct: 719 VERGRV-CNSSGEEASLKDAIVILS 742
>At1g79150.1 68414.m09229 expressed protein ; expression supported
by MPSS
Length = 495
Score = 30.7 bits (66), Expect = 4.0
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 6 TYATQSQVKDEVGIRCQK-LFQDFLEEFKEDNE-IKYEKHAKELLKPELSTLEVSFDDVE 63
T Q+QV++ + +K + +E D+ + YE AKE K + TL F+
Sbjct: 411 TQEEQNQVQENERKKSKKDMMSKIRDEVSADHRGVTYEPDAKERRKMQTETLSAVFETYF 470
Query: 64 KYNQNLATTIIEEYYRIY 81
+ +N TI E Y I+
Sbjct: 471 RILRNTMYTIGERYLYIH 488
>At1g10570.2 68414.m01191 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to EST gb|N96456
Length = 570
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 619 GHVTPAHVHEAYRLLNKSIIRVEQPD--IHLDEDEPQCEPSMDVDQDEPNGTAET---PS 673
G+ TP H L S R + D I+LDEDEP ++ + P G E PS
Sbjct: 261 GYETPRHWSLKASPLQSSSCRKKSDDKVINLDEDEPLSPMVVEEACELPEGLPEDIYYPS 320
Query: 674 NGDSAPKKKLALSFEEYKSLS 694
+ S + + +S ++ K LS
Sbjct: 321 SDQSDGRDLVQVSLKDLKCLS 341
>At1g10570.1 68414.m01190 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to EST gb|N96456
Length = 571
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 619 GHVTPAHVHEAYRLLNKSIIRVEQPD--IHLDEDEPQCEPSMDVDQDEPNGTAET---PS 673
G+ TP H L S R + D I+LDEDEP ++ + P G E PS
Sbjct: 262 GYETPRHWSLKASPLQSSSCRKKSDDKVINLDEDEPLSPMVVEEACELPEGLPEDIYYPS 321
Query: 674 NGDSAPKKKLALSFEEYKSLS 694
+ S + + +S ++ K LS
Sbjct: 322 SDQSDGRDLVQVSLKDLKCLS 342
>At3g59020.1 68416.m06578 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1112
Score = 29.9 bits (64), Expect = 6.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 648 DEDEPQCEPSMD---VDQDEPNGTAETPSNGDSAPKKKLALSFEEYKSLSN 695
+EDE + MD D ++ +G E P D + +KLA ++++S S+
Sbjct: 975 EEDEDGDDDDMDEFQTDDEDEDGDDENPDETDGSTLRKLAAQAKDFRSYSD 1025
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 29.9 bits (64), Expect = 6.9
Identities = 24/104 (23%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 32 FKEDNEIKYEKHAKELLKPELSTLEVSFDDV---EKYNQNLATTIIEEYYRIYPFLNRAI 88
F++ +++ ++ A +LK ++ LEV ++ E++ + + + Y P L RAI
Sbjct: 835 FRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARP-LRRAI 893
Query: 89 LNYIL-SLAETGMKKDLQDKECYVSFVDVPTRHKVRELTTAKIG 131
+ + S+AE + +D+++ + + VD V TT ++G
Sbjct: 894 MRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVG 937
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 29.5 bits (63), Expect = 9.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 176 DADKSVFVDFQKIRIQETQAELPRGCIPRSLEVILRAEA 214
+AD+ V ++ ++ E +AEL R CI R E L AEA
Sbjct: 350 EADEVVEMERERQEDAENEAELVRECIERETEERLEAEA 388
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,049,343
Number of Sequences: 28952
Number of extensions: 685950
Number of successful extensions: 1950
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1909
Number of HSP's gapped (non-prelim): 35
length of query: 799
length of database: 12,070,560
effective HSP length: 87
effective length of query: 712
effective length of database: 9,551,736
effective search space: 6800836032
effective search space used: 6800836032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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