Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000827-TA|BGIBMGA000827-PA|IPR007835|MOFRL
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 31 1.3
02_05_0771 - 31628535-31629133,31629223-31629987,31630808-316309... 31 1.7
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 31 1.7
11_04_0470 - 18092681-18092695,18092725-18092811,18093528-180935... 31 2.3
09_06_0068 - 20661060-20661506,20662702-20662824,20663513-206637... 30 3.0
04_03_0588 + 17595299-17596151,17597519-17597665,17598562-175988... 30 3.0
02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963 30 3.0
11_01_0622 + 4996584-4996800,4996975-4997060,4997112-4997492,499... 30 4.0
06_03_0950 - 26266755-26266917,26267273-26267652,26267742-262679... 30 4.0
06_01_0095 - 785876-786376 29 7.0
02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777... 29 7.0
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 7.0
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717... 29 9.2
>03_05_0710 + 27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 60 ITQLNKDDLLLVLISGGGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISD 119
+ Q + D LL V++ GG + + P LEE + ++K+ SG D TV ++S
Sbjct: 1080 LLQASLDGLLRVILDGGPTRVFS-PSDATLLEEDLEILKEFFISGGDGLPRGTVENLVSR 1138
Query: 120 LK 121
++
Sbjct: 1139 VR 1140
>02_05_0771 -
31628535-31629133,31629223-31629987,31630808-31630905,
31631024-31631193,31631297-31631596,31632208-31632618
Length = 780
Score = 31.1 bits (67), Expect = 1.7
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 160 DGANKAVDVLKKYNLIDALP--KSVQTLLENNGDNLVFPTNNTSNYIIGSNKIS-TKAAV 216
+ A V +LK N +ALP KS + + G N T NY G IS T V
Sbjct: 399 EAAQHGVVLLK--NDANALPLSKSQVSSIAVIGHNANDATRLLGNYF-GPPCISVTPLQV 455
Query: 217 VQCIELNYLPLVLSNKVTGNVQDVANKYSKLVTVICKYLRQNLEIDELKSNIKKLEIS-- 274
+Q + L N NV + +V L L+ D+ + + +LE+S
Sbjct: 456 LQGYVKDTRFLAGCNSAACNVSSIGEAAQLASSVDYVVLFMGLDQDQEREEVDRLELSLP 515
Query: 275 GTDLKVLNEIKISNKKPLCLIL--GGEITV 302
G ++N + + KKP+ L+L GG + V
Sbjct: 516 GMQENLINTVANAAKKPVILVLLCGGPVDV 545
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 72 LISGGGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGGQLAVKAQP 131
L +G +AL LP + E +G+V +S A +K +N V SD+ G+ +
Sbjct: 74 LAAGAAAALASLPVAYADANE-VGVVDSAVSSDAAVKPVNPDAAVSSDVAVGEDLAHKER 132
Query: 132 AQVVSLILS 140
+++ LI S
Sbjct: 133 KRIIELIQS 141
>11_04_0470 -
18092681-18092695,18092725-18092811,18093528-18093593,
18093696-18093740,18093850-18093903,18093987-18094082,
18094161-18094241,18095634-18095714,18095798-18095884,
18095976-18096074,18096644-18096769,18098162-18098248,
18098321-18098389,18098711-18098806,18099053-18099169,
18099710-18099790,18099873-18100010,18100307-18100580,
18100735-18100830,18101612-18101757,18102883-18103141,
18103434-18103537,18103623-18103748,18103872-18103982,
18104200-18104304
Length = 881
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 359 LNLISESTADGL-DVDKYLANNDTYNFFKLFKNDHLHVFTGHT 400
++L+SE A+G D+D N D F KL + VFTGH+
Sbjct: 740 MSLMSELNAEGFFDIDSNSVNWDNECFSKLVEKFKNEVFTGHS 782
>09_06_0068 -
20661060-20661506,20662702-20662824,20663513-20663770,
20665635-20666027
Length = 406
Score = 30.3 bits (65), Expect = 3.0
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 298 GEITVAVKGTGKGGRNQQLALEFSKYLHKVKDQLNDFDIFILSAGTDGIDGPTD-AAGAI 356
G + A K TG ++ ++ S Y + QL DFD L A T+G G
Sbjct: 41 GAVRPASKSTGSTSSHRSIS---SLYEERGHGQLRDFDYDELQAATNGFSRAQKLGEGGF 97
Query: 357 G--YLNLISESTADGLDVDK 374
G Y + S ADG D+
Sbjct: 98 GSVYKGFVRSSPADGKAADR 117
>04_03_0588 +
17595299-17596151,17597519-17597665,17598562-17598837,
17599108-17599805
Length = 657
Score = 30.3 bits (65), Expect = 3.0
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 324 LHKVKDQLNDFD-IFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDV--------DK 374
L ++K+ N+FD +L +G G+ +AAGA+ YL+ + + DV
Sbjct: 399 LEELKEATNNFDPTRVLGSGGHGMVYK-EAAGALYYLHSAASVSVLHRDVKSSNILLDSN 457
Query: 375 YLANNDTYNFFKLFKNDHLHVFTGHTNT 402
Y A + +L ND HVFT T
Sbjct: 458 YTAKVSDFGASRLIPNDQTHVFTNIQGT 485
>02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963
Length = 288
Score = 30.3 bits (65), Expect = 3.0
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 169 LKKYNLIDALPKSVQTL-------LENNGDNLVFPT---NNTSNYIIG--SNKISTKAAV 216
+K N I +P S+ L L+NN + VFP+ N TS II N + + +
Sbjct: 20 IKHNNFIGDIPGSIGQLNRLEELQLDNNRMSRVFPSSLSNFTSLKIINLKHNNFTGELSK 79
Query: 217 VQCIELNYLPLV--LSNKVTGNVQDVANKYSKLVTVICKYLRQNLEIDELKSNIKKLEIS 274
V L L L+ +SNK TG + D + S L T+ + ++ N+K L +
Sbjct: 80 VNFSRLPNLKLLDLMSNKFTGEILDSIYRCSNLTTLQLSSNKFYGQLSPRIDNLKSLVFA 139
Query: 275 G 275
G
Sbjct: 140 G 140
>11_01_0622 +
4996584-4996800,4996975-4997060,4997112-4997492,
4997585-4997605
Length = 234
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 100 LANSGADIKELNTVRKVISDLKGGQLAVKAQPAQVVSLILS 140
+ GAD++ + ++K +D++GG + A P +V+ ++S
Sbjct: 1 MRQEGADVRGSHKIKKTTADVEGGGEWINALPEEVLQHVMS 41
>06_03_0950 -
26266755-26266917,26267273-26267652,26267742-26267972,
26268247-26268419,26268549-26268693
Length = 363
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 339 LSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYL--ANNDTYNFFKLFKNDHL 393
+S + ID P GA GY + I ES LDVD L A+ D Y K+ L
Sbjct: 140 ISTASPLIDVPGAGVGAAGYRDFIDESCWTPLDVDYPLRSAHFDKYVLSKMMSEKEL 196
>06_01_0095 - 785876-786376
Length = 166
Score = 29.1 bits (62), Expect = 7.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 317 ALEFSKYLHKVKDQLNDFDIFILSAGTDGIDGPTDAAGAIGYLNLISESTADGLDVDKYL 376
A E S K K++L FD+ + G D + AA +G L+S + ++ K
Sbjct: 76 AAEGSSSSRKAKEELKKFDVEFMEVGIDMLYDLIMAANFMGVEGLLSLAAQRTAELIKGK 135
Query: 377 ANNDTYNFFKLFKNDH 392
+ F + KNDH
Sbjct: 136 SPEQIREMFGI-KNDH 150
>02_02_0206 -
7771835-7771913,7772083-7772219,7772364-7772422,
7772535-7772610,7772717-7772873,7773241-7773329,
7773648-7773750,7773919-7774013,7774301-7774367,
7774894-7775066
Length = 344
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 309 KGGRNQQLALEFSKYLHKVKDQLNDFDIFILSAGTDGI 346
+GG QL + S Y H VK +LND +F+ AG G+
Sbjct: 198 EGGPCYQLYTK-SFYQHIVKPKLNDRGVFVTQAGPAGV 234
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 262 DELKSNIKKLEISGTDLKVLNEIKISNKKPLCLILGGEITVAVKGTGKGGRNQQLALEFS 321
++L S I +++ +L+ LN K ++ L + + + RN +L LE
Sbjct: 396 NDLSSKISSIDLLNEELQALNSAKNEAEEKLSELTKDYTDLKASSEARESRNSELLLEKD 455
Query: 322 KYLHKVKDQLND 333
+ ++ +L+D
Sbjct: 456 NMIKQLDGKLSD 467
>01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,
7177691-7177810,7177910-7178041,7178136-7178252,
7178335-7178459,7178611-7178920,7179368-7179550,
7179643-7179787,7180126-7181355,7181454-7181563,
7181768-7182037,7182130-7182963
Length = 1370
Score = 28.7 bits (61), Expect = 9.2
Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 74 SGGGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGGQLAVKAQPAQ 133
+GGG+ +L K ++ G + N G ++E++ I ++ G + + +
Sbjct: 1198 NGGGAKVLNASKVVRSMALVHGKLFCGCNDGG-VQEIDLASGTIGVIQQGSKRIIGKASP 1256
Query: 134 VVSLILSDIVGDPLDLIASGPTVQNTDGANKAVDVLKKYNLIDALPKSVQTLLENNGDNL 193
+ SL L DL+ +G T + DGA+ + Y+L+ +P SV+ +L
Sbjct: 1257 IYSLHLHG------DLLYTGST--SLDGASVKIWSSSNYSLVGTIPSSVEVRSLVVSSDL 1308
Query: 194 VFPTNNTSNYIIGSNKISTKAAVVQ 218
V+ + I S + T+ +Q
Sbjct: 1309 VYLGSRNGVVEIWSREKLTRIGALQ 1333
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.135 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,579,213
Number of Sequences: 37544
Number of extensions: 499108
Number of successful extensions: 942
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 939
Number of HSP's gapped (non-prelim): 14
length of query: 421
length of database: 14,793,348
effective HSP length: 84
effective length of query: 337
effective length of database: 11,639,652
effective search space: 3922562724
effective search space used: 3922562724
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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