Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000827-TA|BGIBMGA000827-PA|IPR007835|MOFRL
(421 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-1|AAN73881.1| 397|Caenorhabditis elegans Hypothetical pr... 212 3e-55
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 32 0.67
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 32 0.67
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 32 0.67
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 31 1.2
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 30 3.5
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 30 3.5
U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical pr... 29 4.7
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 29 4.7
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 29 4.7
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 29 4.7
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 29 4.7
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 29 4.7
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 29 6.2
U50307-5|AAK71366.1| 297|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 29 6.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 6.2
Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical pr... 29 8.2
AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical ... 29 8.2
>U21309-1|AAN73881.1| 397|Caenorhabditis elegans Hypothetical
protein C13B9.2 protein.
Length = 397
Score = 212 bits (518), Expect = 3e-55
Identities = 139/410 (33%), Positives = 230/410 (56%), Gaps = 35/410 (8%)
Query: 6 ENILQSKIKYGIISIPMGSLDVFNKSRN-VEYFEGAKDNLPDNSAQNTALKIKNLITQLN 64
+ + S ++ I+ P + N+ N E GA+DNLPD + K+ + I +
Sbjct: 7 DQLKSSLLQKTIVIAPEQQKGIENELENDTEILYGARDNLPDEKSVFATRKVISEIRDFD 66
Query: 65 KDD-LLLVLISGGGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGG 123
+ + L LISGGGSALL P +P+ L EK+ ++ + GA I+ELNT+R+ +SD+KGG
Sbjct: 67 SESTIFLFLISGGGSALLTSPSAPLDLAEKLETIRIMQAHGATIQELNTIRQNLSDVKGG 126
Query: 124 QLAVKAQPAQVVSLILSDIVGDPLDLIASGPTVQNTDGANKAV--DVLK--KYNLIDALP 179
+L + + ++LI+SD++G+P++LIASGPTV +K + ++L+ K N ++ LP
Sbjct: 127 KLLREIKKGCSIALIISDVIGNPVELIASGPTVIPAHQQDKFIISNILESLKINKLE-LP 185
Query: 180 KSVQTLLENN-GDNLVFPTNNTSNYIIGSNKISTKAAVVQCIELNYLPLVLSNKVTGNVQ 238
+V+ +LEN+ + L T+ N+II SN + +AA Y ++++ ++GN
Sbjct: 186 VNVKNVLENHEKEQLPENTSRFQNFIISSNNFALRAAAEYLTSSGYNSTIVTSSLSGNAA 245
Query: 239 DVANKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKPLCLILGG 298
++ K+++++T + I+ + L + + I N P+ L+ GG
Sbjct: 246 EIGKKFAEIIT--------------------EKSITSSHLLKNSNLTIEN-YPIALLFGG 284
Query: 299 EITVAV-KGTGKGGRNQQLALEFSKYLHKVKDQLNDFDIFILSAGTDGIDGPTDAAGAIG 357
E TV + + GKGGRNQ++ L L +K ++ + LSAGTDG DGPTDAAGAI
Sbjct: 285 ETTVHLSENPGKGGRNQEMVL---SCLDALKTRVPAHNFTFLSAGTDGQDGPTDAAGAI- 340
Query: 358 YLNLISESTADGLDVDKYLANNDTYNFFKLFKNDHLHVFTGHTNTNVMDI 407
++ L+ ++L N+D+YNF++ FK H+ TG + TNVMDI
Sbjct: 341 -ISNEDLPLNSLLNSSEFLQNSDSYNFWRQFKGGANHILTGPSGTNVMDI 389
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.67
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 210 ISTKAAVVQCIELNYLPLVLSNKVTGN-VQDVANKYSKLVTVICKY--LRQNL--EIDEL 264
IS+ A ++C+ +NY P KVTG+ ++ V + KL T+ + L N+ +D
Sbjct: 254 ISSNCAHLECLCVNYCP-----KVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWE 308
Query: 265 KSNIKKLEISGTDLKVLNEIKISNKKP 291
K+ I++L+I GT+L I I + P
Sbjct: 309 KTRIEELDIKGTELNSDALISILTRLP 335
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.67
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 210 ISTKAAVVQCIELNYLPLVLSNKVTGN-VQDVANKYSKLVTVICKY--LRQNL--EIDEL 264
IS+ A ++C+ +NY P KVTG+ ++ V + KL T+ + L N+ +D
Sbjct: 237 ISSNCAHLECLCVNYCP-----KVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWE 291
Query: 265 KSNIKKLEISGTDLKVLNEIKISNKKP 291
K+ I++L+I GT+L I I + P
Sbjct: 292 KTRIEELDIKGTELNSDALISILTRLP 318
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.67
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 210 ISTKAAVVQCIELNYLPLVLSNKVTGN-VQDVANKYSKLVTVICKY--LRQNL--EIDEL 264
IS+ A ++C+ +NY P KVTG+ ++ V + KL T+ + L N+ +D
Sbjct: 271 ISSNCAHLECLCVNYCP-----KVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWE 325
Query: 265 KSNIKKLEISGTDLKVLNEIKISNKKP 291
K+ I++L+I GT+L I I + P
Sbjct: 326 KTRIEELDIKGTELNSDALISILTRLP 352
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 31.5 bits (68), Expect = 1.2
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 75 GGGSALLPLPKSPITLEEKIGLVKKLANSGADIKELNTVRKVISDLKGGQLAVKAQPAQV 134
GGGSAL L KS E I ++ + G ++ L++ RK+ D+KG + + Q A V
Sbjct: 111 GGGSAL-DLTKSGKLDESHIAVILREILKG--LEYLHSERKIHRDIKGANVLLDRQTAAV 167
Query: 135 VSLILSDIVGDPLDLIASGPTVQNT 159
I V PLD + T T
Sbjct: 168 --KICDYGVAKPLDTVLKANTFVGT 190
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 29.9 bits (64), Expect = 3.5
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 240 VANKYS-KLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKPLCLILGG 298
+ +YS KL ++ KY +++ E DE+ ++ + L+ L++I ++ I GG
Sbjct: 41 IEEEYSTKLRSLAKKYAKKSEEDDEILKSVSYTSSFNSFLQQLDQIATRHQTSAEHIRGG 100
Query: 299 EITVAVKGTGKGGRNQQLALEFSKYLH-KVKDQLND 333
++ T + +++ A+ K ++ K++DQ+N+
Sbjct: 101 VVSYVASKTCQMRSSRKNAINDLKTINDKLEDQINE 136
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 29.9 bits (64), Expect = 3.5
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 240 VANKYS-KLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKPLCLILGG 298
+ +YS KL ++ KY +++ E DE+ ++ + L+ L++I ++ I GG
Sbjct: 41 IEEEYSTKLRSLAKKYAKKSEEDDEILKSVSYTSSFNSFLQQLDQIATRHQTSAEHIRGG 100
Query: 299 EITVAVKGTGKGGRNQQLALEFSKYLH-KVKDQLND 333
++ T + +++ A+ K ++ K++DQ+N+
Sbjct: 101 VVSYVASKTCQMRSSRKNAINDLKTINDKLEDQINE 136
>U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical
protein F49E8.2 protein.
Length = 414
Score = 29.5 bits (63), Expect = 4.7
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 286 ISNKKPLCLILGGEI----TVAVKG-TGKGGRNQQLALEFSKYLHKVKDQLNDFDIFILS 340
+S K ++ GGEI TVA K T G ++Q L+ S+ + +D+DIF
Sbjct: 320 LSEKASYRIVRGGEIIHISTVADKSKTDNGKESKQSRLDNSERGKPTRSMDSDYDIFDNQ 379
Query: 341 AGTDGIDGPTDAAGAIGYLNLISESTADGL 370
TD +G + G N +SES L
Sbjct: 380 DETDSEEGARSESIDTG--NKVSESEPGSL 407
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 242 NKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKP 291
N++ TVI YLR L D +S+ + S DL N KI KP
Sbjct: 4 NRWIWWATVILLYLRTGLAADFFRSSEENDRKSSDDLDNFNSTKIEPDKP 53
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 242 NKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKP 291
N++ TVI YLR L D +S+ + S DL N KI KP
Sbjct: 4 NRWIWWATVILLYLRTGLAADFFRSSEENDRKSSDDLDNFNSTKIEPDKP 53
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 242 NKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKP 291
N++ TVI YLR L D +S+ + S DL N KI KP
Sbjct: 4 NRWIWWATVILLYLRTGLAADFFRSSEENDRKSSDDLDNFNSTKIEPDKP 53
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 242 NKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKP 291
N++ TVI YLR L D +S+ + S DL N KI KP
Sbjct: 4 NRWIWWATVILLYLRTGLAADFFRSSEENDRKSSDDLDNFNSTKIEPDKP 53
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 242 NKYSKLVTVICKYLRQNLEIDELKSNIKKLEISGTDLKVLNEIKISNKKP 291
N++ TVI YLR L D +S+ + S DL N KI KP
Sbjct: 4 NRWIWWATVILLYLRTGLAADFFRSSEENDRKSSDDLDNFNSTKIEPDKP 53
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 268 IKKLEISGTDLKVLNEIKISNKKPLCLILGGEITVAVKGTGKGGRNQQLALEFSKYLHKV 327
IKKL++S KV+ + + PL + +KG GG + AL+ YL
Sbjct: 118 IKKLQVSRASQKVIQYLTLHTSWPL---------MYIKGNAVGGLKELKALK-QDYL--- 164
Query: 328 KDQLND--FDIFILSAGTDGIDGPTDAA 353
K+ L D +D+ ++ G+ G+ +A+
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEAS 192
>U50307-5|AAK71366.1| 297|Caenorhabditis elegans Hypothetical
protein F43H9.4 protein.
Length = 297
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 143 VGDPLDLIASGPTVQNTDGANKAVDVLKKYNLIDALPKSVQTLLENNGDNLVFPTN---N 199
+G+ L++ A+ ++N K +D + L A + ++E+NG LVF N
Sbjct: 230 LGEKLEIGAAKMAIENGMRPCKFIDTTNSFFLEKAKKSKLMDVVESNGTPLVFDQNVYSQ 289
Query: 200 TSNY 203
SNY
Sbjct: 290 ASNY 293
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 268 IKKLEISGTDLKVLNEIKISNKKPLCLILGGEITVAVKGTGKGGRNQQLALEFSKYLHKV 327
IKKL++S KV+ + + PL + +KG GG + AL+ YL
Sbjct: 118 IKKLQVSRASQKVIQYLTLHTSWPL---------MYIKGNAVGGLKELKALK-QDYL--- 164
Query: 328 KDQLND--FDIFILSAGTDGIDGPTDAA 353
K+ L D +D+ ++ G+ G+ +A+
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEAS 192
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 261 IDELKSNIKKLEISGTDLKVLNEIKISNKKPLCLILGGEITVAVKGTGKGGRNQQLALEF 320
ID LK I+ + G D + + + ++ + +LGG I + + G R + +
Sbjct: 1498 IDVLKRTIETVSFDGRDRRTVRKFELGDTPVTMDVLGGYIYLITR-QGSIHRMHKFTGKT 1556
Query: 321 SKYLHKVKD 329
+KY+ K+++
Sbjct: 1557 NKYVQKIRE 1565
>Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical
protein C06G8.3b protein.
Length = 363
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 120 LKGGQLAVKAQPAQVVSLILSDIVGDPLDLIASGPTVQ--NTDGANKAVDVLKKYNLIDA 177
L+G L V+ A + +L LS ++ ++ + G + NT+ + + Y L+
Sbjct: 199 LEGFALGVQDSDAAIWTLFLSLLLHKSIEAFSVGLQISRANTEKKGIVMCTILVYALMTP 258
Query: 178 LPKSVQTLLENNGD 191
L + TLL+N GD
Sbjct: 259 LGSVLGTLLQNTGD 272
>AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical
protein Y11D7A.11 protein.
Length = 313
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 342 GTDGIDGPTDAAGAIGYLNLISESTADGLDVD 373
G DGIDGP G G +L ES++DG ++
Sbjct: 136 GRDGIDGPAGKPGRDGQ-DLDGESSSDGSQIE 166
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.135 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,018,931
Number of Sequences: 27539
Number of extensions: 440864
Number of successful extensions: 1184
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1170
Number of HSP's gapped (non-prelim): 23
length of query: 421
length of database: 12,573,161
effective HSP length: 83
effective length of query: 338
effective length of database: 10,287,424
effective search space: 3477149312
effective search space used: 3477149312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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