GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000827-TA|BGIBMGA000827-PA|IPR007835|MOFRL
         (421 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    28   0.17 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    27   0.40 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.7  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 0.17
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 35  EYFEGAKDNLPDNSAQNTALKIKNLITQ 62
           E ++  K N+ DNSAQ T  K  N++ +
Sbjct: 264 EEYKSGKRNIIDNSAQKTESKTNNIVVE 291


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 320 FSKYLHKVKDQLNDFDIFILSAGTDGIDGPTD 351
           F K L  V + +N FD ++ +   + ++ PTD
Sbjct: 220 FQKALRMVDENINGFDPYVKTPNDEELEKPTD 251


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 165 AVDVLKKYNLIDALPKSVQTLLENNGDNLVFPTNNTSN 202
           A  V K  ++I  +PK     L   G+     TNNTSN
Sbjct: 696 AKKVKKDKDIILNVPKESTQSLTTTGNVSYLTTNNTSN 733


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 349  PTDAAGAIGYLNLISESTADGLDVDKYLANNDTYNFFKL----FKNDHLHVFTGHTNTNV 404
            P+DA  A+    L S S  D LDV   ++N       K+      N++L       NT +
Sbjct: 1344 PSDALIALYSQGLFSLSEIDNLDVSLDVSNPKNAGKKKIDVRAKLNEYLDKADVIVNTPI 1403

Query: 405  MDIH 408
            MD H
Sbjct: 1404 MDAH 1407


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.135    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,545
Number of Sequences: 429
Number of extensions: 5009
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 421
length of database: 140,377
effective HSP length: 59
effective length of query: 362
effective length of database: 115,066
effective search space: 41653892
effective search space used: 41653892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)