Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000826-TA|BGIBMGA000826-PA|IPR001156|Peptidase S60,
transferrin lactoferrin
         (855 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    31   0.033
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   5.0  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   6.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   8.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   8.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 0.033
 Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 72  YIELQCKKAFDIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYS 131
           Y+E++CK+ ++ ++C K   + + ++ G  + +  V    H +VP  +E+     P + +
Sbjct: 783 YLEIKCKRIYNEKQCCKNCARVDYSMNGTYSADDEVPMLLHGVVP-RKEI-----PAKSA 836

Query: 132 VAVVRKGGLPNI 143
             ++ +GG PN+
Sbjct: 837 EQILAEGGCPNL 848


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 389 SDIRVSTLPPYQQRTDDTGRPIELPFQLFSSNETTD 424
           S + VST PP +  T  T + +  P    SS  +T+
Sbjct: 145 SPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTE 180


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/29 (31%), Positives = 19/29 (65%)

Query: 365 EPNRFSYDNYNFNKDRYYDNRETESDIRV 393
           EP+ F+  N+ F+ +R     E+++DI++
Sbjct: 359 EPSGFTSSNHPFSINRLLPTAESKADIKM 387


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
          protein 8 protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 66 GLFGNDYIELQCKKAFDIEEC 86
          GL GN+YIE Q   A D   C
Sbjct: 25 GLAGNNYIEKQLLCALDKAPC 45


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 478 SDPEMDKCVKMRRALKAASLSPELSCW 504
           +D  M KC+K R A + A   P    W
Sbjct: 250 TDETMIKCLKSRPARQIALTVPRYQAW 276


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 478 SDPEMDKCVKMRRALKAASLSPELSCW 504
           +D  M KC+K R A + A   P    W
Sbjct: 250 TDETMIKCLKSRPARQIALTVPRYQAW 276


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,527
Number of Sequences: 317
Number of extensions: 9164
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 7
length of query: 855
length of database: 114,650
effective HSP length: 63
effective length of query: 792
effective length of database: 94,679
effective search space: 74985768
effective search space used: 74985768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)