Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000826-TA|BGIBMGA000826-PA|IPR001156|Peptidase S60,
transferrin lactoferrin
(855 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0265 - 15012662-15013918 34 0.42
01_06_0707 + 31355929-31356244,31356766-31356992,31357081-313572... 33 0.73
03_06_0096 - 31627332-31627570,31628467-31628743,31628963-316291... 32 2.2
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 31 2.9
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 31 5.1
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 30 6.8
12_02_0971 + 24949137-24950534 30 9.0
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 30 9.0
>08_02_0265 - 15012662-15013918
Length = 418
Score = 34.3 bits (75), Expect = 0.42
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 474 LCVTSDPEMDKCVKMRRALKAASLSPELSCWRAHSSRHCARAIAAGSCDFALFDAGDMLH 533
+ ++S P+ D CV + + S + E+ WR A A A + A+F GD+
Sbjct: 142 IVMSSAPDSDGCVVAAIVMGSYSSTREIVIWRRGQESCSAPAAAPSNVADAVFHGGDLYV 201
Query: 534 AAQHDRLVPFMQEVYSS 550
+ +L F V+SS
Sbjct: 202 VDKCSQLYVFPNHVFSS 218
>01_06_0707 +
31355929-31356244,31356766-31356992,31357081-31357257,
31357355-31357510,31357778-31358054,31358192-31358306,
31360349-31360634,31361196-31361381,31361663-31361833,
31362307-31362426
Length = 676
Score = 33.5 bits (73), Expect = 0.73
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 179 GGLKVTDCNNHVKSATEYFGESCAPNSLKDLYNPIGDNSDKLCKLCY 225
GG K++D + + + +CA DLY PIG + + K+CY
Sbjct: 197 GGFKISDIDMRYMRSCKVVVSTCAFGGGDDLYQPIGMVNSSIGKVCY 243
>03_06_0096 -
31627332-31627570,31628467-31628743,31628963-31629118,
31629205-31629381,31629543-31629745,31630680-31630995
Length = 455
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 177 QEGGLKVTDCNNHVKSATEYFGESCAPNSLKDLYNPIGDNSDKLCKLCY 225
+ GG KV+D + + +CA DL+ PIG + K+CY
Sbjct: 187 ENGGFKVSDVDKDYMRSCSVVVATCAFGGGDDLHQPIGMTEVSIKKVCY 235
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 31.5 bits (68), Expect = 2.9
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 391 IRVSTLPPYQQRTDDTGR-PIE-LPFQLFSSNETTDLLLQDSTINFIILSESEQAAKHIL 448
I+ LPP +Q + D+G PI+ L F+ F E D L+ FI L S QA + I
Sbjct: 265 IKAPELPPRRQLSFDSGDYPIKRLSFE-FDDAEEDDQFLERICKMFIDLIVSNQALETI- 322
Query: 449 NNKYVGDQAEKAVMGIRDCPVKRAALCVTSDPEMDKCVKMRRALKAASLSPEL 501
+G + G + P L +D D +RR LKA LSP +
Sbjct: 323 GKDLIGSNSP----GSCETPSSEPLLTGIADTCPD--APLRRPLKAVQLSPSI 369
>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 219 KLCKLCYGGAG---IRCTLADPFAGYEGALKCL-VANNSGDIAFVRD 261
+ C CY G G I+C L D F GYE L + +NN IA V +
Sbjct: 963 RYCPNCYDGNGSLCIQCELDDLFQGYEARLFLVKKSNNDSVIASVEE 1009
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 489 RRALKAASLSPELSCWRAHSSRHCARAIAAGSCDFA 524
RRAL + S SP+ + + HSS C+RA+ G FA
Sbjct: 977 RRALVSQSASPDAAAFAVHSS--CSRALRMGPKPFA 1010
>12_02_0971 + 24949137-24950534
Length = 465
Score = 29.9 bits (64), Expect = 9.0
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 435 IILSESEQAAKHILNNKYVGDQAEKAVMGIRDCPVKRAALCVTSDPEMDKCVKMRRALKA 494
+++S S + + D A AV+ PVK CV D E D R + +
Sbjct: 357 VVVSGSADRTISVWRREEGADHARLAVLAGHTGPVK----CVAMDEEDDTAGDKRWVVYS 412
Query: 495 ASLSPELSCWRAHSSRHCARA 515
SL + WR S+ A A
Sbjct: 413 GSLDGSVKVWRVSSTPDAAAA 433
>03_02_0149 +
5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 29.9 bits (64), Expect = 9.0
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 127 PYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACFPSVGSLAGWVMPIHVLMQEG 179
P Q V G +P++ P G + GA F S G+ A V P V Q G
Sbjct: 321 PQQLLDGVQTSGTIPDVHPTLGPNVLTGASHSFASTGANASLVAP-SVTSQSG 372
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.135 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,221,408
Number of Sequences: 37544
Number of extensions: 1176280
Number of successful extensions: 2318
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2313
Number of HSP's gapped (non-prelim): 10
length of query: 855
length of database: 14,793,348
effective HSP length: 88
effective length of query: 767
effective length of database: 11,489,476
effective search space: 8812428092
effective search space used: 8812428092
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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