Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000823-TA|BGIBMGA000823-PA|IPR008949|Terpenoid synthase
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 56 4e-08
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 54 2e-07
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 50 3e-06
08_01_0622 + 5429317-5429403,5429673-5429765,5429950-5430030,543... 34 0.18
07_03_1039 - 23454130-23454552,23454859-23455536 31 2.2
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949... 30 2.9
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 29 6.7
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 56.4 bits (130), Expect = 4e-08
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 38 AEQIVGYPTSFLNLRWLFNDEIANTAIHLRKLVGTNHPLLKSAKNLLIGSKSNLQSVGLI 97
A+ ++ + ++ + F+ + + ++ L + T +P+L SA + G+ L+
Sbjct: 132 ADDLLKLNNNLKSVSFTFSSQSLHHSVQL--VHDTKNPVLVSAAEQIFGAGGKRLRPALV 189
Query: 98 ILLVSKAAGFDANYYNRDHYDSGVLHAQRALAEIVEMKRTGHMIHKAMVNLQDKEKHKEK 157
L VS+A A + + LAEI+EM T +IH +++ + KE
Sbjct: 190 FL-VSRATAELAGLLE-------LTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKET 241
Query: 158 VKDLLYGNKIVLLTGDFLLAKCLQQLGGLRNNAVTELISTGLRDLVEGD 206
+ L YG ++ +L GDF+ A+ L L N V +LIS ++D G+
Sbjct: 242 IHQL-YGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGE 289
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 54.4 bits (125), Expect = 2e-07
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 54 LFNDEIANTAIHLRKLVGTNHPLLKSAKNLL--IGSKSNLQSVGLIILLVSKAAGFDANY 111
L DE++ A LR +V P L SA +G++ + ++LL++ A F +
Sbjct: 95 LVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGK-RFRPTVLLLMASALKFPLS- 152
Query: 112 YNRDHYDSGVLHA--------QRALAEIVEMKRTGHMIHKAMVNLQDKEKHKEKVKDLLY 163
D + GVL Q+ +AEI EM ++H +++ D + + ++
Sbjct: 153 ---DSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIM- 208
Query: 164 GNKIVLLTGDFLLAKCLQQLGGLRNNAVTELISTGLRDLVEGD 206
GNK+ +L GDFLL++ L L N V L++T + LV G+
Sbjct: 209 GNKLSVLAGDFLLSRACVALAALGNTEVVSLMATAVEHLVTGE 251
Score = 39.5 bits (88), Expect = 0.005
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 254 DEWTLRTMLTSGSLLGKGCQAATKLAHLGEDAERNAYILGGHLAIMWQLYLDVKDFFTHP 313
D + +T + SL+ C+A LA D AY G +L + +QL DV DF
Sbjct: 266 DYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTS 325
Query: 314 YS----------YSLVGAPVIFAIWEYPTIYGHILESKLERKPVEYKQLYYAVRSTRSLE 363
S + ++ AP+++A+ E+P ++ +++ + P + ++ +R +E
Sbjct: 326 ASLGKGSLTDIRHGIITAPMLYAMEEFPQLH-EVVDRGFD-NPANVELALDYLQKSRGIE 383
Query: 364 YLCVFFEEELASVLKCSERFP-VDDARVALQKMAV 397
E +K E P DD V + A+
Sbjct: 384 KTKELAREHANRAIKAIEALPDSDDEDVLTSRRAL 418
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 50.4 bits (115), Expect = 3e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 128 LAEIVEMKRTGHMIHKAMVNLQDKEKHKEKVKDLLYGNKIVLLTGDFLLAKCLQQLGGLR 187
LAEI+EM T +IH +++ + KE + L YG ++ +L GDF+ A+ L L
Sbjct: 102 LAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQL-YGTRVAVLAGDFMFAQSSWFLANLE 160
Query: 188 NNAVTELISTGLRDLVEGDF 207
N V +LIS + V DF
Sbjct: 161 NIEVIKLISQMMCSQVIKDF 180
>08_01_0622 +
5429317-5429403,5429673-5429765,5429950-5430030,
5430166-5430237,5430379-5430495,5430585-5430671,
5431126-5431200,5431442-5431566,5432489-5432621,
5432719-5432808,5433210-5433389
Length = 379
Score = 34.3 bits (75), Expect = 0.18
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 54 LFNDEIANTAIHLRKLVGTNHPLLKSAKNLLI-GSKSNLQSVGLIILLVSKAAGFDANYY 112
L DE++ + LR +V P L A ++ ++LL++ + D
Sbjct: 68 LIKDEVSEISNRLRSMVVAEVPELTLAAGYFFRAGAEGKRTCPTVLLLMASSISMDMADP 127
Query: 113 NRDHYDSGVLHAQRALAEIVEMKRTGHMIHKAMVNLQDKEKHKEKVKDLLYGNKIVLLTG 172
+ + LAEI E+ +IH +++ + + + + ++ G K+ +L G
Sbjct: 128 IVGSKNE-IRERYMRLAEITELIHVTSLIHDDVLDDANTRRGMDSLNCVM-GKKLAVLAG 185
Query: 173 DFLLAKCLQQLGGLRNNA 190
DFLL+K +NA
Sbjct: 186 DFLLSKAFSTAAVSLDNA 203
Score = 33.1 bits (72), Expect = 0.41
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 254 DEWTLRTMLTSGSLLGKGCQAATKLAHLGEDAERNAYILGGHLAIMWQLYLDVKDF 309
D + ++ + +L+ C+A LA + AY G HL I +QL D+ DF
Sbjct: 248 DYYLQKSYYKTAALISNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDILDF 303
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 129 AEIVEMKRTGHMIHKAMVNLQDKEKHKEKVK-DLLYGNKIVLLTGDFLLA 177
A VEM T ++H + + D + + K ++YG I +LTGD LL+
Sbjct: 132 AAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLS 181
>02_02_0367 +
9496893-9497022,9498262-9498442,9498519-9498660,
9498757-9498826,9498920-9499089
Length = 230
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 281 LGEDAERNAYILGGHLAIMWQLYLDVKDFFTHPYSYSLVGAPVIFAIWEYPTIY 334
L +D + +A ++GG ++W L+ V F S+ L+G I +W TI+
Sbjct: 49 LWKDKKISAAVIGG-ATVLWVLFEVVDYHFLTLISHVLIGVLAILFLWSKATIF 101
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 231 HYKWETEDNLEKLGSNDFLGHGKDE---WTLRTMLTSGSLLGK 270
HY +E + EK DF+ G D+ W M+ S +L GK
Sbjct: 520 HYPFENRELFEKNFPGDFIAEGLDQTRGWFYTLMVLSTALFGK 562
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,161,031
Number of Sequences: 37544
Number of extensions: 528275
Number of successful extensions: 1122
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1113
Number of HSP's gapped (non-prelim): 9
length of query: 409
length of database: 14,793,348
effective HSP length: 84
effective length of query: 325
effective length of database: 11,639,652
effective search space: 3782886900
effective search space used: 3782886900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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