Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000822-TA|BGIBMGA000822-PA|undefined
(78 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 27 0.30
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 23 4.9
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 23 6.4
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 23 6.4
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 23 6.4
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 22 8.5
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 22 8.5
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 22 8.5
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 22 8.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 22 8.5
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 22 8.5
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 27.1 bits (57), Expect = 0.30
Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 1 MVTDMKDV-QDFKLKPMKCEFNFLSKSDGSAILSQVSCAVDNQGNVILDPTHAQLQTST 58
++TD+ + +D++L C F+FLS++ S++ ++ A Q + L+P + +++ +
Sbjct: 413 LITDLLQILEDYELDMPNC-FSFLSRNSPSSMENEEYAAKLMQACICLNPNNERVRNES 470
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 23.0 bits (47), Expect = 4.9
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 2 VTDMKDVQDFKLKPMKCEFNFLSKSDGSAILSQVSCAVDNQGNVILDPT 50
+ D ++ +D L+ MK E N S + S ++ QG+V P+
Sbjct: 410 ILDEQEFEDITLEQMKTELNKFSVRLNNIEAQADSSTMEFQGHVWYKPS 458
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 22.6 bits (46), Expect = 6.4
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 19 EFNFLSKSDGSAILSQVSCAVDNQGNVILDPTHAQLQTSTATMT 62
+F L+ G+ + V + G+V LDP +T TM+
Sbjct: 37 QFGLLALHSGNEYVHLHGFYVGDSGSVYLDPADGTDDAATFTMS 80
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 22.6 bits (46), Expect = 6.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 3 TDMKDVQDFKLKPMK-CEFNFLSKSDGSAILSQVS 36
TD+ +V + LK +K C+ N ++ DG A L +S
Sbjct: 816 TDVDEVSAYLLKSIKFCDPN-ITPHDGDASLCDIS 849
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 22.6 bits (46), Expect = 6.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 35 VSCAVDNQGNV 45
VSCAV N GNV
Sbjct: 30 VSCAVKNSGNV 40
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 22.2 bits (45), Expect = 8.5
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 25 KSDGSAILSQVSCAVDNQGNVILDPTHAQLQTSTATMTFVFDSRDKS 71
K GS ++ S A + Q PTHA L +T + D+ S
Sbjct: 371 KDVGSPSTAETS-AEEKQMETYKTPTHAALSDIISTHDYALDANSAS 416
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 22.2 bits (45), Expect = 8.5
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 31 ILSQVSCAVDNQGNVILDPTHAQLQTSTATMTFVFDSRDKSLITC 75
IL D+Q + P TS+ TF + RD + C
Sbjct: 886 ILKNEIAMKDDQELAAIAPLMNNFSTSSGFTTFTSNGRDLQRVAC 930
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 22.2 bits (45), Expect = 8.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 49 PTHAQLQTSTATMTFVFD 66
P H ++ + T + TF+FD
Sbjct: 109 PWHGRVSSVTTSKTFIFD 126
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 37 CAVDNQGNVILDPTHAQL 54
C D Q N ILD T Q+
Sbjct: 43 CVYDEQDNAILDFTSGQM 60
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 22.2 bits (45), Expect = 8.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 3 TDMKDVQDFKLKPMKCEFNFLSKSDG 28
T M+ Q FK + M+ N SK DG
Sbjct: 151 TFMRGFQSFKQRSMEWVENIASKFDG 176
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 22.2 bits (45), Expect = 8.5
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 23 LSKSDGSAILSQVSCAVDNQGNVILDPTHAQLQTSTATMTFVFDSRDKSLIT 74
+SK+ + + C V+ ++I +PT + T + F D +S+I+
Sbjct: 250 MSKNSSRVLGTSSYCDVNGMDSIIFEPTESSALTD--DILFAEDPGTESIIS 299
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.131 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,458
Number of Sequences: 5004
Number of extensions: 9294
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 11
length of query: 78
length of database: 2,362,478
effective HSP length: 58
effective length of query: 20
effective length of database: 2,072,246
effective search space: 41444920
effective search space used: 41444920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)
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