GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000822-TA|BGIBMGA000822-PA|undefined
         (78 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   2.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    19   7.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   9.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   9.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   9.4  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 30  AILSQVSCAVDNQGNVILDPTHAQLQTSTATMTFVFD 66
           +IL Q +  + ++   I+D   A + T   T+ F+FD
Sbjct: 308 SILRQKNLDIRDKKAAIVDFIAAGIHTLGNTLVFLFD 344


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.0 bits (37), Expect = 7.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 36  SCAVDNQGNVILDPTHAQLQTS 57
           + AVD+QG+V+  P    L  S
Sbjct: 145 AAAVDHQGSVLDGPDSPPLVES 166


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 35  VSCAVDNQGNVILDPTHA 52
           +SC +D +G+V   P  A
Sbjct: 580 LSCLLDGKGDVAFVPLTA 597


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 35  VSCAVDNQGNVILDPTHA 52
           +SC +D +G+V   P  A
Sbjct: 580 LSCLLDGKGDVAFVPLTA 597


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 35  VSCAVDNQGNVILDPTHA 52
           +SC +D +G+V   P  A
Sbjct: 580 LSCLLDGKGDVAFVPLTA 597


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.131    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,707
Number of Sequences: 429
Number of extensions: 511
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 78
length of database: 140,377
effective HSP length: 47
effective length of query: 31
effective length of database: 120,214
effective search space:  3726634
effective search space used:  3726634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.6 bits)
S2: 36 (18.6 bits)